RNA–Protein interactions for RNA: ENST00000492418.1

TMC1-205, Transcript of transmembrane channel like 1, humanhuman

TSL 3

Gene TMC1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-205ENST00000492418 TATDN1Q6P1N9 297 aa13.34□□□□□ -0.27
TMC1-205ENST00000492418 CTR9Q6PD62 1173 aa13.34□□□□□ -0.27
TMC1-205ENST00000492418 FASTKD5Q7L8L6 764 aaKnown RBP13.34□□□□□ -0.27
TMC1-205ENST00000492418 ZNF280CQ8ND82 737 aa13.34□□□□□ -0.27
TMC1-205ENST00000492418 FAM227BQ96M60 508 aa13.34□□□□□ -0.27
TMC1-205ENST00000492418 GH2P01242 217 aa13.33□□□□□ -0.28
TMC1-205ENST00000492418 SPP2Q13103 211 aa13.33□□□□□ -0.28
TMC1-205ENST00000492418 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
TMC1-205ENST00000492418 SBK1Q52WX2 424 aa13.33□□□□□ -0.28
TMC1-205ENST00000492418 CCDC129Q6ZRS4 1044 aa13.33□□□□□ -0.28
TMC1-205ENST00000492418 MS4A4AQ96JQ5 239 aa13.33□□□□□ -0.28
TMC1-205ENST00000492418 CCDC17Q96LX7 622 aa13.33□□□□□ -0.28
TMC1-205ENST00000492418 ZBTB21Q9ULJ3 1066 aa13.33□□□□□ -0.28
TMC1-205ENST00000492418 NAV1Q8NEY1 1877 aa13.33□□□□□ -0.28
TMC1-205ENST00000492418 OTOFQ9HC10 1997 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 THSD7BQ9C0I4 1608 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 CYP2D7A0A087X1C5 515 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 A0A0D9SFI3 127 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 TESPA1A2RU30 521 aaPredicted RBP13.32□□□□□ -0.28
TMC1-205ENST00000492418 SHMT1P34896 483 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 CDK8P49336 464 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 LBX1P52954 281 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 PDE4BQ07343 736 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 GADL1Q6ZQY3 521 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 ZNF444Q8N0Y2 327 aaPredicted RBP13.32□□□□□ -0.28
TMC1-205ENST00000492418 STK11IPQ8N1F8 1099 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 BRI3BPQ8WY22 251 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 FEZ1Q99689 392 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 DNAJC18Q9H819 358 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 ZFYVE28Q9HCC9 887 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 TMOD4Q9NZQ9 345 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 KCNH4Q9UQ05 1017 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 AFG3L2Q9Y4W6 797 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 CCDC171Q6TFL3 1326 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 PCNTO95613 3336 aa13.32□□□□□ -0.28
TMC1-205ENST00000492418 TBC1D8O95759 1140 aa13.31□□□□□ -0.28
TMC1-205ENST00000492418 GSPT1P15170 499 aaKnown RBP13.31□□□□□ -0.28
TMC1-205ENST00000492418 GABPAQ06546 454 aa13.31□□□□□ -0.28
TMC1-205ENST00000492418 PABPC4Q13310 644 aaKnown RBP eCLIP13.31□□□□□ -0.28
TMC1-205ENST00000492418 CASC1Q6TDU7 716 aa13.31□□□□□ -0.28
TMC1-205ENST00000492418 TMEM179Q6ZVK1 233 aa13.31□□□□□ -0.28
TMC1-205ENST00000492418 C16orf86Q6ZW13 317 aa13.31□□□□□ -0.28
TMC1-205ENST00000492418 WDR18Q9BV38 432 aa13.31□□□□□ -0.28
TMC1-205ENST00000492418 ZCCHC17Q9NP64 241 aaKnown RBP13.31□□□□□ -0.28
TMC1-205ENST00000492418 C19orf81C9J6K1 198 aa13.3□□□□□ -0.28
TMC1-205ENST00000492418 USP17L10C9JJH3 530 aa13.3□□□□□ -0.28
TMC1-205ENST00000492418 IGF2BP3O00425 579 aaKnown RBP eCLIP13.3□□□□□ -0.28
TMC1-205ENST00000492418 HSPA8P11142 646 aaKnown RBP13.3□□□□□ -0.28
TMC1-205ENST00000492418 RRP1BQ14684 758 aaKnown RBP13.3□□□□□ -0.28
TMC1-205ENST00000492418 TAF1CQ15572 869 aaPredicted RBP13.3□□□□□ -0.28
TMC1-205ENST00000492418 ANKRD23Q86SG2 305 aa13.3□□□□□ -0.28
TMC1-205ENST00000492418 CCDC84Q86UT8 332 aaPredicted RBP13.3□□□□□ -0.28
TMC1-205ENST00000492418 EPB41L4AQ9HCS5 686 aaPredicted RBP13.3□□□□□ -0.28
TMC1-205ENST00000492418 PRDM10Q9NQV6 1147 aa13.3□□□□□ -0.28
TMC1-205ENST00000492418 DOCK1Q14185 1865 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 A0A0G2JLL6 359 aaPredicted RBP13.29□□□□□ -0.28
TMC1-205ENST00000492418 BTBD19C9JJ37 291 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 PDHXO00330 501 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 HSPD1P10809 573 aaKnown RBP13.29□□□□□ -0.28
TMC1-205ENST00000492418 USP14P54578 494 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 ATP2B2Q01814 1243 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 PPARAQ07869 468 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 ALX1Q15699 326 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 KIAA1211Q6ZU35 1233 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 PRRT2Q7Z6L0 340 aaPredicted RBP13.29□□□□□ -0.28
TMC1-205ENST00000492418 SLC44A5Q8NCS7 719 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 PTPN18Q99952 460 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 SH2D4AQ9H788 454 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 TOMM22Q9NS69 142 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.29□□□□□ -0.28
TMC1-205ENST00000492418 CTNNA3Q9UI47 895 aa13.29□□□□□ -0.28
TMC1-205ENST00000492418 BAZ2AQ9UIF9 1905 aaKnown RBP13.29□□□□□ -0.28
TMC1-205ENST00000492418 FGAP02671 866 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 OSBPP22059 807 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 CHMLP26374 656 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 HMGCS2P54868 508 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 BACE1P56817 501 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 EVX2Q03828 476 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 MTMR2Q13614 643 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 SEPT2Q15019 361 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 ARHGEF6Q15052 776 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 VPS53Q5VIR6 699 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 USP17L2Q6R6M4 530 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 ZNF589Q86UQ0 364 aaPredicted RBP13.28□□□□□ -0.28
TMC1-205ENST00000492418 FAM43AQ8N2R8 423 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 PROCA1Q8NCQ7 364 aaPredicted RBP13.28□□□□□ -0.28
TMC1-205ENST00000492418 PARK7Q99497 189 aaKnown RBP13.28□□□□□ -0.28
TMC1-205ENST00000492418 KANSL2Q9H9L4 492 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 ARHGEF10LQ9HCE6 1279 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 PNMA3Q9UL41 463 aa13.28□□□□□ -0.28
TMC1-205ENST00000492418 ZNF213O14771 459 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 FKTNO75072 461 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 TSPY3P0CV98 308 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 TSPY8P0CW00 308 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 AKR1B1P15121 316 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 JAG1P78504 1218 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 CRHR2Q13324 411 aa13.27□□□□□ -0.29
TMC1-205ENST00000492418 BMP2KLQ5H9B9 411 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms