RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-219ENST00000491747 MANSC4A6NHS7 340 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-219ENST00000491747 CTNND1O60716 968 aaKnown RBP11.19□□□□□ -0.62
BRCA1-219ENST00000491747 CTCFP49711 727 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-219ENST00000491747 FOXP4Q8IVH2 680 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-219ENST00000491747 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-219ENST00000491747 TNPO1Q92973 898 aaKnown RBP11.19□□□□□ -0.62
BRCA1-219ENST00000491747 HERC5Q9UII4 1024 aaKnown RBP11.19□□□□□ -0.62
BRCA1-219ENST00000491747 ZFYP08048 801 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-219ENST00000491747 PTPRAP18433 802 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 PPATQ06203 517 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 SREBF2Q12772 1141 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 PPIL2Q13356 520 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 RAB3GAP1Q15042 981 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 BRI3BPQ8WY22 251 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 EVI5LQ96CN4 794 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 R3HDMLQ9H3Y0 253 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 MCM9Q9NXL9 1143 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 SLC4A4Q9Y6R1 1079 aa11.19□□□□□ -0.62
BRCA1-219ENST00000491747 CYP2D7A0A087X1C5 515 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 TBC1D8O95759 1140 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 CAP2P40123 477 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 ZMYM1Q5SVZ6 1142 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 COL13A1Q5TAT6 717 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-219ENST00000491747 CRACR2BQ8N4Y2 399 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-219ENST00000491747 GSG1L2A8MUP6 293 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 GPAA1O43292 621 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 HLA-DOAP06340 250 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 TRIM44Q96DX7 344 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-219ENST00000491747 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-219ENST00000491747 ATP8A2Q9NTI2 1148 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 SAGE1Q9NXZ1 904 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 AFG3L2Q9Y4W6 797 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 ZHX2Q9Y6X8 837 aa11.18□□□□□ -0.62
BRCA1-219ENST00000491747 CCL15-CCL14A0A0B4J2E2 113 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 CA12O43570 354 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 GDF11O95390 407 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 POLR3DP05423 398 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-219ENST00000491747 GTF2A2P52657 109 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 INHBEP58166 350 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 GABPAQ06546 454 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 MOGSQ13724 837 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 CCL15Q16663 113 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 TATDN1Q6P1N9 297 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 CCDC129Q6ZRS4 1044 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 TTC6Q86TZ1 520 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 RILPL2Q969X0 211 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 EHD4Q9H223 541 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 SERPINB13Q9UIV8 391 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 KCNH4Q9UQ05 1017 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 TRIM6-TRIM34B2RNG4 842 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 GOLGA6L22H0YM25 854 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 K7ELQ4 463 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-219ENST00000491747 SHMT1P34896 483 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 CTR9Q6PD62 1173 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 DYNLL2Q96FJ2 89 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 FAM227BQ96M60 508 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 EPB41L4AQ9HCS5 686 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-219ENST00000491747 PICK1Q9NRD5 415 aa11.17□□□□□ -0.62
BRCA1-219ENST00000491747 USP17L12C9JPN9 530 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 USP17L21D6R901 530 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 FOXP2O15409 715 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 SLC44A5Q8NCS7 719 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 A0A0D9SFI3 127 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 ESPNB1AK53 854 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 BTBD19C9JJ37 291 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 GSPT1P15170 499 aaKnown RBP11.16□□□□□ -0.62
BRCA1-219ENST00000491747 SNAPC2Q13487 334 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 C12orf60Q5U649 245 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 KIF2CQ99661 725 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 TRIM34Q9BYJ4 488 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 PRDM10Q9NQV6 1147 aa11.16□□□□□ -0.62
BRCA1-219ENST00000491747 LOC285556D6RIA3 1793 aa11.15□□□□□ -0.62
BRCA1-219ENST00000491747 CETPP11597 493 aa11.15□□□□□ -0.62
BRCA1-219ENST00000491747 DGKZQ13574 1117 aa11.15□□□□□ -0.62
BRCA1-219ENST00000491747 LRRFIP1Q32MZ4 808 aaKnown RBP11.15□□□□□ -0.62
BRCA1-219ENST00000491747 TRIM75PA6NK02 468 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 PATL2C9JE40 543 aaKnown RBP11.14□□□□□ -0.63
BRCA1-219ENST00000491747 CXCL11O14625 94 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 SDSP20132 328 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 NMIQ13287 307 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-219ENST00000491747 TTC22Q5TAA0 569 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 GPAT2Q6NUI2 795 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 CFHR5Q9BXR6 569 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 ZBTB21Q9ULJ3 1066 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 A0A0G2JLL6 359 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-219ENST00000491747 USP17L5A8MUK1 530 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 GH2P01242 217 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 GUCY1A2P33402 732 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 SPP2Q13103 211 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 CRHR2Q13324 411 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 CERKLQ49MI3 558 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-219ENST00000491747 VPS53Q5VIR6 699 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 PRRT2Q7Z6L0 340 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-219ENST00000491747 IFNL3Q8IZI9 196 aa11.14□□□□□ -0.63
BRCA1-219ENST00000491747 ALDH1A1P00352 501 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 SBK1Q52WX2 424 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 ZNF589Q86UQ0 364 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-219ENST00000491747 HELLSQ9NRZ9 838 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms