RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 LRRCC1Q9C099 1032 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 GINM1Q9NU53 330 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 TMOD4Q9NZQ9 345 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 SERPINB13Q9UIV8 391 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 ZBTB21Q9ULJ3 1066 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 BRCA2P51587 3418 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 ZNF532Q9HCE3 1301 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 TNPO2O14787 897 aaKnown RBP10.01□□□□□ -0.81
LSM2-213ENST00000491421 ATP5JP18859 108 aa10.01□□□□□ -0.81
LSM2-213ENST00000491421 GCLCP48506 637 aaPredicted RBP10.01□□□□□ -0.81
LSM2-213ENST00000491421 BACE1P56817 501 aa10.01□□□□□ -0.81
LSM2-213ENST00000491421 FAM110CQ1W6H9 321 aa10.01□□□□□ -0.81
LSM2-213ENST00000491421 SHROOM1Q2M3G4 852 aaPredicted RBP10.01□□□□□ -0.81
LSM2-213ENST00000491421 PRPF38BQ5VTL8 546 aaKnown RBP10.01□□□□□ -0.81
LSM2-213ENST00000491421 HOMEZQ8IX15 550 aa10.01□□□□□ -0.81
LSM2-213ENST00000491421 EDC3Q96F86 508 aaKnown RBP10.01□□□□□ -0.81
LSM2-213ENST00000491421 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
LSM2-213ENST00000491421 EHD4Q9H223 541 aa10.01□□□□□ -0.81
LSM2-213ENST00000491421 BOLA2Q9H3K6 86 aa10.01□□□□□ -0.81
LSM2-213ENST00000491421 PAG1Q9NWQ8 432 aa10.01□□□□□ -0.81
LSM2-213ENST00000491421 BIN2Q9UBW5 565 aaPredicted RBP10.01□□□□□ -0.81
LSM2-213ENST00000491421 ZSWIM8A7E2V4 1837 aa10□□□□□ -0.81
LSM2-213ENST00000491421 MKI67P46013 3256 aaKnown RBP10□□□□□ -0.81
LSM2-213ENST00000491421 TCRBV5S4A2TA0A5A2 114 aa10□□□□□ -0.81
LSM2-213ENST00000491421 C19orf81C9J6K1 198 aa10□□□□□ -0.81
LSM2-213ENST00000491421 USP17L10C9JJH3 530 aa10□□□□□ -0.81
LSM2-213ENST00000491421 TULP1O00294 542 aaPredicted RBP10□□□□□ -0.81
LSM2-213ENST00000491421 GH2P01242 217 aa10□□□□□ -0.81
LSM2-213ENST00000491421 POLR3DP05423 398 aaPredicted RBP10□□□□□ -0.81
LSM2-213ENST00000491421 IRX3P78415 501 aaPredicted RBP10□□□□□ -0.81
LSM2-213ENST00000491421 TATDN1Q6P1N9 297 aa10□□□□□ -0.81
LSM2-213ENST00000491421 HAUS7Q99871 368 aa10□□□□□ -0.81
LSM2-213ENST00000491421 DDX24Q9GZR7 859 aaKnown RBP eCLIP10□□□□□ -0.81
LSM2-213ENST00000491421 GABRQQ9UN88 632 aa10□□□□□ -0.81
LSM2-213ENST00000491421 SIPA1L1O43166 1804 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 SMARCA5O60264 1052 aaPredicted RBP9.99□□□□□ -0.81
LSM2-213ENST00000491421 ADCY3O60266 1144 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 FLT3LGP49771 235 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 PLCD1P51178 756 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 UBXN2AP68543 259 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 MTFR1Q15390 333 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 ABCB5Q2M3G0 1257 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 CERKLQ49MI3 558 aaPredicted RBP9.99□□□□□ -0.81
LSM2-213ENST00000491421 LCORLQ8N3X6 602 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 SLAIN1Q8ND83 568 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 COA7Q96BR5 231 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 FEZ1Q99689 392 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 ARMT1Q9H993 441 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 MCM9Q9NXL9 1143 aa9.99□□□□□ -0.81
LSM2-213ENST00000491421 PHIPQ8WWQ0 1821 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 PDE4DIPQ5VU43 2346 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 MBD4O95243 580 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 CCL5P13501 91 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 HOXA7P31268 230 aaPredicted RBP9.98□□□□□ -0.81
LSM2-213ENST00000491421 SHMT1P34896 483 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 ADD2P35612 726 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 RAB3GAP1Q15042 981 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 ZYXQ15942 572 aaKnown RBP9.98□□□□□ -0.81
LSM2-213ENST00000491421 USP17L2Q6R6M4 530 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 SDR42E1Q8WUS8 393 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 CABP5Q9NP86 173 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 DCP1AQ9NPI6 582 aaPredicted RBP9.98□□□□□ -0.81
LSM2-213ENST00000491421 EMILIN3Q9NT22 766 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 LOC285556D6RIA3 1793 aa9.98□□□□□ -0.81
LSM2-213ENST00000491421 ELNP15502 786 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 HERVK_113P62684 666 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 IRF5Q13568 498 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 UBE3CQ15386 1083 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 SLFNL1Q499Z3 407 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 ZSCAN25Q6NSZ9 544 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 NKX2-3Q8TAU0 364 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 PXYLP1Q8TE99 480 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 GPATCH3Q96I76 525 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 P2RX7Q99572 595 aaKnown RBP9.97□□□□□ -0.81
LSM2-213ENST00000491421 RNF208Q9H0X6 261 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 DCTPP1Q9H773 170 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 ECHDC1Q9NTX5 307 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 MORF4L1Q9UBU8 362 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 FOCADQ5VW36 1801 aa9.97□□□□□ -0.81
LSM2-213ENST00000491421 MYO5AQ9Y4I1 1855 aaKnown RBP9.97□□□□□ -0.81
LSM2-213ENST00000491421 RBBP6Q7Z6E9 1792 aaKnown RBP9.96□□□□□ -0.81
LSM2-213ENST00000491421 PTPRFP10586 1907 aa9.96□□□□□ -0.81
LSM2-213ENST00000491421 MPHOSPH10O00566 681 aaKnown RBP9.96□□□□□ -0.82
LSM2-213ENST00000491421 PRKAB2O43741 272 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 INHAP05111 366 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 GJB1P08034 283 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 CYP2D6P10635 497 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 USP14P54578 494 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 EVX2Q03828 476 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 GABPAQ06546 454 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 AMOTL1Q8IY63 956 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 GPRC5AQ8NFJ5 357 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 ACER1Q8TDN7 264 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 GTF3C2Q8WUA4 911 aaPredicted RBP9.96□□□□□ -0.82
LSM2-213ENST00000491421 SHISA4Q96DD7 197 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 DDRGK1Q96HY6 314 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 C12orf42Q96LP6 360 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 KIAA1683Q9H0B3 1180 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 UNC93B1Q9H1C4 597 aa9.96□□□□□ -0.82
LSM2-213ENST00000491421 TXNRD2Q9NNW7 524 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 218.4 ms