RNA–Protein interactions for RNA: ENST00000491407.1

PPP1R35-205, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 5

Gene PPP1R35, Length 942 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-205	ENST00000491407	CHMP4B	Q9H444	224 aa	Known RBP	33.15	■■■□□ 2.9
PPP1R35-205	ENST00000491407	USP17L5	A8MUK1	530 aa		33.14	■■■□□ 2.9
PPP1R35-205	ENST00000491407	MAP4K4	O95819	1239 aa	Predicted RBP	33.14	■■■□□ 2.9
PPP1R35-205	ENST00000491407	SNRK	Q9NRH2	765 aa		33.14	■■■□□ 2.9
PPP1R35-205	ENST00000491407	TLR7	Q9NYK1	1049 aa	Known RBP	33.14	■■■□□ 2.9
PPP1R35-205	ENST00000491407	DBNL	Q9UJU6	430 aa	Known RBP	33.14	■■■□□ 2.9
PPP1R35-205	ENST00000491407	COL2A1	P02458	1487 aa	Predicted RBP	33.13	■■■□□ 2.89
PPP1R35-205	ENST00000491407	AS3MT	Q9HBK9	375 aa		33.13	■■■□□ 2.89
PPP1R35-205	ENST00000491407	LAMA3	Q16787	3333 aa		33.12	■■■□□ 2.89
PPP1R35-205	ENST00000491407	RRP1B	Q14684	758 aa	Known RBP	33.12	■■■□□ 2.89
PPP1R35-205	ENST00000491407	ERC1	Q8IUD2	1116 aa		33.12	■■■□□ 2.89
PPP1R35-205	ENST00000491407	NSUN4	Q96CB9	384 aa	Known RBP	33.12	■■■□□ 2.89
PPP1R35-205	ENST00000491407	SH3D19	Q5HYK7	790 aa		33.11	■■■□□ 2.89
PPP1R35-205	ENST00000491407	C11orf49	Q9H6J7	331 aa		33.11	■■■□□ 2.89
PPP1R35-205	ENST00000491407	RAI14	Q9P0K7	980 aa		33.11	■■■□□ 2.89
PPP1R35-205	ENST00000491407	HMMR	O75330	724 aa		33.1	■■■□□ 2.89
PPP1R35-205	ENST00000491407	SYN1	P17600	705 aa		33.1	■■■□□ 2.89
PPP1R35-205	ENST00000491407	COL6A3	P12111	3177 aa		33.1	■■■□□ 2.89
PPP1R35-205	ENST00000491407	CYP2B6	P20813	491 aa		33.09	■■■□□ 2.89
PPP1R35-205	ENST00000491407	MNX1	P50219	401 aa	Predicted RBP	33.09	■■■□□ 2.89
PPP1R35-205	ENST00000491407	IRX3	P78415	501 aa	Predicted RBP	33.09	■■■□□ 2.89
PPP1R35-205	ENST00000491407	HSP90AB4P	Q58FF6	505 aa		33.09	■■■□□ 2.89
PPP1R35-205	ENST00000491407	TEX11	Q8IYF3	940 aa		33.09	■■■□□ 2.89
PPP1R35-205	ENST00000491407	TRIB2	Q92519	343 aa		33.09	■■■□□ 2.89
PPP1R35-205	ENST00000491407	MORF4L1	Q9UBU8	362 aa		33.09	■■■□□ 2.89
PPP1R35-205	ENST00000491407	HERC5	Q9UII4	1024 aa	Known RBP	33.09	■■■□□ 2.89
PPP1R35-205	ENST00000491407	APBB1	O00213	710 aa		33.08	■■■□□ 2.89
PPP1R35-205	ENST00000491407	GPR153	Q6NV75	609 aa		33.08	■■■□□ 2.89
PPP1R35-205	ENST00000491407	IL1RAPL2	Q9NP60	686 aa		33.08	■■■□□ 2.89
PPP1R35-205	ENST00000491407	LRP2BP	Q9P2M1	347 aa		33.08	■■■□□ 2.89
PPP1R35-205	ENST00000491407	OGDHL	Q9ULD0	1010 aa		33.08	■■■□□ 2.89
PPP1R35-205	ENST00000491407	AACS	Q86V21	672 aa		33.07	■■■□□ 2.88
PPP1R35-205	ENST00000491407	RHPN1	Q8TCX5	695 aa		33.07	■■■□□ 2.88
PPP1R35-205	ENST00000491407	ZNF512B	Q96KM6	892 aa	Predicted RBP	33.07	■■■□□ 2.88
PPP1R35-205	ENST00000491407	MAGEA10	P43363	369 aa	Predicted RBP	33.06	■■■□□ 2.88
PPP1R35-205	ENST00000491407	MTMR2	Q13614	643 aa		33.06	■■■□□ 2.88
PPP1R35-205	ENST00000491407	DEFB123	Q8N688	67 aa		33.06	■■■□□ 2.88
PPP1R35-205	ENST00000491407	TMOD4	Q9NZQ9	345 aa		33.06	■■■□□ 2.88
PPP1R35-205	ENST00000491407	SIPA1L1	O43166	1804 aa		33.05	■■■□□ 2.88
PPP1R35-205	ENST00000491407	NUDT12	Q9BQG2	462 aa		33.05	■■■□□ 2.88
PPP1R35-205	ENST00000491407	WDR18	Q9BV38	432 aa		33.05	■■■□□ 2.88
PPP1R35-205	ENST00000491407	PI4KB	Q9UBF8	816 aa		33.05	■■■□□ 2.88
PPP1R35-205	ENST00000491407	CYP2E1	P05181	493 aa	Predicted RBP	33.04	■■■□□ 2.88
PPP1R35-205	ENST00000491407	PRKAR2A	P13861	404 aa	Known RBP	33.04	■■■□□ 2.88
PPP1R35-205	ENST00000491407	ZAP70	P43403	619 aa		33.04	■■■□□ 2.88
PPP1R35-205	ENST00000491407	BACE1	P56817	501 aa		33.04	■■■□□ 2.88
PPP1R35-205	ENST00000491407	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	33.04	■■■□□ 2.88
PPP1R35-205	ENST00000491407	P2RX7	Q99572	595 aa	Known RBP	33.04	■■■□□ 2.88
PPP1R35-205	ENST00000491407	NOL10	Q9BSC4	688 aa	Known RBP	33.04	■■■□□ 2.88
PPP1R35-205	ENST00000491407	PEX10	O60683	326 aa		33.03	■■■□□ 2.88
PPP1R35-205	ENST00000491407	LRIT3	Q3SXY7	679 aa		33.03	■■■□□ 2.88
PPP1R35-205	ENST00000491407		Q7L0L9	218 aa		33.03	■■■□□ 2.88
PPP1R35-205	ENST00000491407	TDH	Q8IZJ6	230 aa		33.03	■■■□□ 2.88
PPP1R35-205	ENST00000491407	ASNS	P08243	561 aa		33.02	■■■□□ 2.88
PPP1R35-205	ENST00000491407	HOXA7	P31268	230 aa	Predicted RBP	33.02	■■■□□ 2.88
PPP1R35-205	ENST00000491407	MAP3K21	Q5TCX8	1036 aa		33.02	■■■□□ 2.88
PPP1R35-205	ENST00000491407	GPRC5A	Q8NFJ5	357 aa		33.02	■■■□□ 2.88
PPP1R35-205	ENST00000491407	SOCS4	Q8WXH5	440 aa		33.02	■■■□□ 2.88
PPP1R35-205	ENST00000491407	KIF1BP	Q96EK5	621 aa		33.02	■■■□□ 2.88
PPP1R35-205	ENST00000491407	DHX36	Q9H2U1	1008 aa	Known RBP	33.02	■■■□□ 2.88
PPP1R35-205	ENST00000491407	UBE2O	Q9C0C9	1292 aa	Known RBP	33.01	■■■□□ 2.87
PPP1R35-205	ENST00000491407	BCL11A	Q9H165	835 aa		33.01	■■■□□ 2.87
PPP1R35-205	ENST00000491407	TXNRD2	Q9NNW7	524 aa		33.01	■■■□□ 2.87
PPP1R35-205	ENST00000491407	CDK5RAP2	Q96SN8	1893 aa		33.01	■■■□□ 2.87
PPP1R35-205	ENST00000491407	PFAS	O15067	1338 aa		33.01	■■■□□ 2.87
PPP1R35-205	ENST00000491407	XRCC5	P13010	732 aa	Known RBP	33	■■■□□ 2.87
PPP1R35-205	ENST00000491407	HERVK_113	P62684	666 aa		33	■■■□□ 2.87
PPP1R35-205	ENST00000491407	PIH1D3	Q9NQM4	214 aa	Known RBP	33	■■■□□ 2.87
PPP1R35-205	ENST00000491407	C19orf81	C9J6K1	198 aa		32.99	■■■□□ 2.87
PPP1R35-205	ENST00000491407	CLASRP	Q8N2M8	674 aa	Known RBP	32.99	■■■□□ 2.87
PPP1R35-205	ENST00000491407	AATF	Q9NY61	560 aa	Known RBP eCLIP	32.99	■■■□□ 2.87
PPP1R35-205	ENST00000491407	NDUFB9	Q9Y6M9	179 aa		32.99	■■■□□ 2.87
PPP1R35-205	ENST00000491407	RAB11FIP3	O75154	756 aa		32.98	■■■□□ 2.87
PPP1R35-205	ENST00000491407	BAG3	O95817	575 aa		32.98	■■■□□ 2.87
PPP1R35-205	ENST00000491407	ZKSCAN1	P17029	563 aa	Predicted RBP	32.98	■■■□□ 2.87
PPP1R35-205	ENST00000491407	JAG1	P78504	1218 aa		32.98	■■■□□ 2.87
PPP1R35-205	ENST00000491407	NAA16	Q6N069	864 aa	Predicted RBP	32.98	■■■□□ 2.87
PPP1R35-205	ENST00000491407	CCAR1	Q8IX12	1150 aa	Known RBP	32.98	■■■□□ 2.87
PPP1R35-205	ENST00000491407	TRMT44	Q8IYL2	757 aa	Known RBP	32.98	■■■□□ 2.87
PPP1R35-205	ENST00000491407	TRIM34	Q9BYJ4	488 aa		32.98	■■■□□ 2.87
PPP1R35-205	ENST00000491407	USP17L10	C9JJH3	530 aa		32.97	■■■□□ 2.87
PPP1R35-205	ENST00000491407	MAPK4	P31152	587 aa		32.97	■■■□□ 2.87
PPP1R35-205	ENST00000491407	RRP1	P56182	461 aa	Known RBP	32.97	■■■□□ 2.87
PPP1R35-205	ENST00000491407	CACNB2	Q08289	660 aa	Predicted RBP	32.97	■■■□□ 2.87
PPP1R35-205	ENST00000491407	MAPKAPK5	Q8IW41	473 aa		32.97	■■■□□ 2.87
PPP1R35-205	ENST00000491407	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	32.97	■■■□□ 2.87
PPP1R35-205	ENST00000491407	TGFBRAP1	Q8WUH2	860 aa		32.97	■■■□□ 2.87
PPP1R35-205	ENST00000491407	RBPJL	Q9UBG7	517 aa		32.97	■■■□□ 2.87
PPP1R35-205	ENST00000491407	STXBP5L	Q9Y2K9	1186 aa		32.97	■■■□□ 2.87
PPP1R35-205	ENST00000491407	FOCAD	Q5VW36	1801 aa		32.97	■■■□□ 2.87
PPP1R35-205	ENST00000491407	MAST2	Q6P0Q8	1798 aa		32.96	■■■□□ 2.87
PPP1R35-205	ENST00000491407	PLCG2	P16885	1265 aa		32.96	■■■□□ 2.87
PPP1R35-205	ENST00000491407	FOXP4	Q8IVH2	680 aa	Predicted RBP	32.96	■■■□□ 2.87
PPP1R35-205	ENST00000491407	DNAJC18	Q9H819	358 aa		32.96	■■■□□ 2.87
PPP1R35-205	ENST00000491407	GDF11	O95390	407 aa		32.95	■■■□□ 2.87
PPP1R35-205	ENST00000491407	ERVK-9	P63128	1117 aa		32.95	■■■□□ 2.87
PPP1R35-205	ENST00000491407	ERVK-24	P63145	666 aa		32.95	■■■□□ 2.87
PPP1R35-205	ENST00000491407		Q3C1V9	767 aa		32.95	■■■□□ 2.87
PPP1R35-205	ENST00000491407	PAGR1	Q9BTK6	254 aa		32.95	■■■□□ 2.87
PPP1R35-205	ENST00000491407	MTMR10	Q9NXD2	777 aa		32.95	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms