RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CASP8Q14790 479 aa22.02■■□□□ 1.11
SNAPC3-206ENST00000490969 POSTNQ15063 836 aa22.02■■□□□ 1.11
SNAPC3-206ENST00000490969 ZNF569Q5MCW4 686 aa22.02■■□□□ 1.11
SNAPC3-206ENST00000490969 TTC39AQ5SRH9 613 aa22.02■■□□□ 1.11
SNAPC3-206ENST00000490969 SYNE4Q8N205 404 aa22.02■■□□□ 1.11
SNAPC3-206ENST00000490969 FAM71BQ8TC56 605 aa22.02■■□□□ 1.11
SNAPC3-206ENST00000490969 SAMSN1Q9NSI8 373 aaKnown RBP22.02■■□□□ 1.11
SNAPC3-206ENST00000490969 AKAP2Q9Y2D5 859 aa22.02■■□□□ 1.11
SNAPC3-206ENST00000490969 ZMYM6O95789 1325 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 RHOXF2BP0C7M4 288 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 VSNL1P62760 191 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 ITPK1Q13572 414 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 KIF4BQ2VIQ3 1234 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 HSP90B2PQ58FF3 399 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 RHOXF2Q9BQY4 288 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 SPEF2Q9C093 1822 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 A0A1B0GTH6 734 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 EIF3CLB5ME19 914 aaKnown RBP22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 H7C1W4 665 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 ZNF827Q17R98 1081 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 TTC31Q49AM3 519 aaPredicted RBP22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 CCDC102AQ96A19 550 aa22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 EIF3CQ99613 913 aaKnown RBP22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 NAA15Q9BXJ9 866 aaKnown RBP22.01■■□□□ 1.11
SNAPC3-206ENST00000490969 SPECC1Q5M775 1068 aa22■■□□□ 1.11
SNAPC3-206ENST00000490969 NT5DC1Q5TFE4 455 aa22■■□□□ 1.11
SNAPC3-206ENST00000490969 MED15Q96RN5 788 aa22■■□□□ 1.11
SNAPC3-206ENST00000490969 GBP3Q9H0R5 595 aa22■■□□□ 1.11
SNAPC3-206ENST00000490969 WDR19Q8NEZ3 1342 aa22■■□□□ 1.11
SNAPC3-206ENST00000490969 CTAGE9A4FU28 777 aa22■■□□□ 1.11
SNAPC3-206ENST00000490969 GTF2A1P52655 376 aaPredicted RBP22■■□□□ 1.11
SNAPC3-206ENST00000490969 MORC3Q14149 939 aa22■■□□□ 1.11
SNAPC3-206ENST00000490969 WASHC4Q2M389 1173 aa22■■□□□ 1.11
SNAPC3-206ENST00000490969 PACS2Q86VP3 889 aa22■■□□□ 1.11
SNAPC3-206ENST00000490969 KRI1Q8N9T8 703 aaKnown RBP22■■□□□ 1.11
SNAPC3-206ENST00000490969 CWC25Q9NXE8 425 aaPredicted RBP22■■□□□ 1.11
SNAPC3-206ENST00000490969 TBC1D2BQ9UPU7 963 aa22■■□□□ 1.11
SNAPC3-206ENST00000490969 SPATA31A6Q5VVP1 1343 aa21.99■■□□□ 1.11
SNAPC3-206ENST00000490969 CDKL5O76039 1030 aa21.99■■□□□ 1.11
SNAPC3-206ENST00000490969 PRR29P0C7W0 189 aa21.99■■□□□ 1.11
SNAPC3-206ENST00000490969 IL15P40933 162 aaPredicted RBP21.99■■□□□ 1.11
SNAPC3-206ENST00000490969 FOXO4P98177 505 aa21.99■■□□□ 1.11
SNAPC3-206ENST00000490969 METAP2P50579 478 aaKnown RBP eCLIP21.99■■□□□ 1.11
SNAPC3-206ENST00000490969 LRRC31Q6UY01 552 aa21.99■■□□□ 1.11
SNAPC3-206ENST00000490969 YY1AP1Q9H869 796 aa21.99■■□□□ 1.11
SNAPC3-206ENST00000490969 MAP3K15Q6ZN16 1313 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 MYH14Q7Z406 1995 aaKnown RBP21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 PHACTR2O75167 634 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 TFRCP02786 760 aaKnown RBP21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 GPTP24298 496 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 ATP6V1AP38606 617 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 SARSP49591 514 aaKnown RBP21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 FKBP4Q02790 459 aaKnown RBP eCLIP21.98■■□□□ 1.117e-6■■■■□ 25.4
SNAPC3-206ENST00000490969 RBL2Q08999 1139 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 RASGRP2Q7LDG7 609 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 PPFIBP1Q86W92 1011 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 PHKBQ93100 1093 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 LOC102724428A0A0B4J2F2 783 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 TEX33O43247 280 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 SIK1P57059 783 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 TCIRG1Q13488 830 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 INTS5Q6P9B9 1019 aaKnown RBP21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 ISCA1Q9BUE6 129 aa21.98■■□□□ 1.11
SNAPC3-206ENST00000490969 CTAGE15A4D2H0 777 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 ZNF213O14771 459 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 CTAGE8P0CG41 777 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 CORO7P57737 925 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 CTAGE6Q86UF2 777 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 CTAGE4Q8IX94 777 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 SLC35F6Q8N357 371 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 IGSF22Q8N9C0 903 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 MED4Q9NPJ6 270 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 RXRAP19793 462 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 SLC9C2Q5TAH2 1124 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 SMIM5Q71RC9 77 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 TRIML1Q8N9V2 468 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 CPLX3Q8WVH0 158 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 ACBD3Q9H3P7 528 aa21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 ANGEL1Q9UNK9 670 aaKnown RBP21.97■■□□□ 1.11
SNAPC3-206ENST00000490969 TUBBP07437 444 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 PLCD1P51178 756 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 TRIM29Q14134 588 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 MEX3CQ5U5Q3 659 aaKnown RBP21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 CPLX2Q6PUV4 134 aaKnown RBP21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 STK11IPQ8N1F8 1099 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 SERTAD1Q9UHV2 236 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 LRRIQ3A6PVS8 624 aaPredicted RBP21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 POLR2DO15514 142 aaKnown RBP21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 TRDNQ13061 729 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 WHAMMP3Q1A5X7 153 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 LRRC24Q50LG9 513 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 APTXQ7Z2E3 356 aaKnown RBP21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 FAM89AQ96GI7 184 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 FAM204AQ9H8W3 233 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 JRKLQ9Y4A0 524 aa21.96■■□□□ 1.11
SNAPC3-206ENST00000490969 ZFYP08048 801 aaPredicted RBP21.95■■□□□ 1.1
SNAPC3-206ENST00000490969 PPM1EQ8WY54 764 aa21.95■■□□□ 1.1
SNAPC3-206ENST00000490969 CDC5LQ99459 802 aaKnown RBP21.95■■□□□ 1.1
SNAPC3-206ENST00000490969 NAPGQ99747 312 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms