RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.37□□□□□ -0.59
SRRM1-217ENST00000490543 ZCCHC17Q9NP64 241 aaKnown RBP11.37□□□□□ -0.59
SRRM1-217ENST00000490543 ARAP2Q8WZ64 1704 aa11.37□□□□□ -0.59
SRRM1-217ENST00000490543 CUL9Q8IWT3 2517 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 GRM8O00222 908 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 DLL1O00548 723 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 TRIM66O15016 1216 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 CCL5P13501 91 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 INPP5BP32019 993 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 GRK4P32298 578 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 PRMT2P55345 433 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 CCDC27Q2M243 656 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 APOBEC3HQ6NTF7 200 aaKnown RBP11.36□□□□□ -0.59
SRRM1-217ENST00000490543 KAZALD1Q96I82 304 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 USB1Q9BQ65 265 aaKnown RBP11.36□□□□□ -0.59
SRRM1-217ENST00000490543 RIPOR2Q9Y4F9 1068 aa11.36□□□□□ -0.59
SRRM1-217ENST00000490543 ADGRA2Q96PE1 1338 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 FANCIQ9NVI1 1328 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 PDHXO00330 501 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 LCE2BO14633 110 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 GJB1P08034 283 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 GJA8P48165 433 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 HDLBPQ00341 1268 aaKnown RBP11.35□□□□□ -0.59
SRRM1-217ENST00000490543 EXOSC9Q06265 439 aaKnown RBP11.35□□□□□ -0.59
SRRM1-217ENST00000490543 MOGSQ13724 837 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 FAM83AQ86UY5 434 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 SLC17A8Q8NDX2 589 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 RAET1EQ8TD07 263 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 TEKT1Q969V4 418 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 ZDHHC15Q96MV8 337 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 RNF208Q9H0X6 261 aa11.35□□□□□ -0.59
SRRM1-217ENST00000490543 C9orf78Q9NZ63 289 aaPredicted RBP11.35□□□□□ -0.59
SRRM1-217ENST00000490543 SOX1O00570 391 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-217ENST00000490543 ZBTB7BO15156 539 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-217ENST00000490543 MMP16P51512 607 aa11.34□□□□□ -0.59
SRRM1-217ENST00000490543 PPATQ06203 517 aa11.34□□□□□ -0.59
SRRM1-217ENST00000490543 LRRC24Q50LG9 513 aa11.34□□□□□ -0.59
SRRM1-217ENST00000490543 ANKRD23Q86SG2 305 aa11.34□□□□□ -0.59
SRRM1-217ENST00000490543 VPS37DQ86XT2 251 aa11.34□□□□□ -0.59
SRRM1-217ENST00000490543 PARP9Q8IXQ6 854 aa11.34□□□□□ -0.59
SRRM1-217ENST00000490543 SUCLG2Q96I99 432 aa11.34□□□□□ -0.59
SRRM1-217ENST00000490543 BIN2Q9UBW5 565 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-217ENST00000490543 IL16Q14005 1332 aa11.34□□□□□ -0.59
SRRM1-217ENST00000490543 MYPNQ86TC9 1320 aa11.34□□□□□ -0.59
SRRM1-217ENST00000490543 FRAT2O75474 233 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-217ENST00000490543 HOXD10P28358 340 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 PRKCZQ05513 592 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 FKBP1CQ5VVH2 108 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 U2AF1L4Q8WU68 220 aaKnown RBP11.33□□□□□ -0.6
SRRM1-217ENST00000490543 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 HTATIP2Q9BUP3 242 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 MRIQ9BWK5 157 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 ZNF341Q9BYN7 854 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 UNC93B1Q9H1C4 597 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 TMOD2Q9NZR1 351 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 GABRQQ9UN88 632 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 KCNH4Q9UQ05 1017 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 CACNA1FO60840 1977 aa11.33□□□□□ -0.6
SRRM1-217ENST00000490543 A0A0C4DFX4 3053 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 FARP2O94887 1054 aaPredicted RBP11.32□□□□□ -0.6
SRRM1-217ENST00000490543 NBPF7P0C2Y1 421 aaPredicted RBP11.32□□□□□ -0.6
SRRM1-217ENST00000490543 CYP2C8P10632 490 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 BCRP11274 1271 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 RPIAP49247 311 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 TCP10Q12799 353 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 DCAF15Q66K64 600 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 GPAT2Q6NUI2 795 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 SLC4A10Q6U841 1118 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 SYMPKQ92797 1274 aaKnown RBP11.32□□□□□ -0.6
SRRM1-217ENST00000490543 ZNF112Q9UJU3 913 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 NR2E3Q9Y5X4 410 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 MROH5Q6ZUA9 1318 aa11.32□□□□□ -0.6
SRRM1-217ENST00000490543 GDF9O60383 454 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 ALDH1L1O75891 902 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 SGPL1O95470 568 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 PRR20EP86478 221 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 PRR20CP86479 221 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 PRR20DP86480 221 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 PRR20BP86481 221 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 PRR20AP86496 221 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 NFIAQ12857 509 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 TRAF7Q6Q0C0 670 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 HHIPL2Q6UWX4 724 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 KLHDC4Q8TBB5 520 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 HOOK2Q96ED9 719 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 SRCIN1Q9C0H9 1055 aa11.31□□□□□ -0.6
SRRM1-217ENST00000490543 TNFRSF10AO00220 468 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 DXOO77932 396 aaKnown RBP11.3□□□□□ -0.6
SRRM1-217ENST00000490543 PDE8BO95263 885 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 FDX1P10109 184 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 ELNP15502 786 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 FCGRTP55899 365 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 UBXN2AP68543 259 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 CDC42EP5Q6NZY7 148 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 ZFPM1Q8IX07 1006 aa11.3□□□□□ -0.6
SRRM1-217ENST00000490543 ANKRD44Q8N8A2 993 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms