RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ABCF2Q9UG63 623 aa10.17□□□□□ -0.78
USP39-216ENST00000490193 OGDHLQ9ULD0 1010 aa10.17□□□□□ -0.78
USP39-216ENST00000490193 CDK5RAP2Q96SN8 1893 aa10.17□□□□□ -0.78
USP39-216ENST00000490193 FRMPD3Q5JV73 1810 aa10.17□□□□□ -0.78
USP39-216ENST00000490193 MAST2Q6P0Q8 1798 aa10.16□□□□□ -0.78
USP39-216ENST00000490193 MECOMQ03112 1051 aa10.16□□□□□ -0.78
USP39-216ENST00000490193 SPP2Q13103 211 aa10.16□□□□□ -0.78
USP39-216ENST00000490193 C7orf61Q8IZ16 206 aa10.16□□□□□ -0.78
USP39-216ENST00000490193 ASCC2Q9H1I8 757 aaPredicted RBP10.16□□□□□ -0.78
USP39-216ENST00000490193 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.16□□□□□ -0.78
USP39-216ENST00000490193 TAOK2Q9UL54 1235 aa10.16□□□□□ -0.78
USP39-216ENST00000490193 HDAC5Q9UQL6 1122 aa10.16□□□□□ -0.78
USP39-216ENST00000490193 STXBP5LQ9Y2K9 1186 aa10.16□□□□□ -0.78
USP39-216ENST00000490193 FAM196BA6NMK8 535 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 USP17L5A8MUK1 530 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 PYGBP11216 843 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 XRCC5P13010 732 aaKnown RBP10.15□□□□□ -0.78
USP39-216ENST00000490193 CAP2P40123 477 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 HMGCS2P54868 508 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 TIMM10P62072 90 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 TRIM32Q13049 653 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 MVPQ14764 893 aaKnown RBP10.15□□□□□ -0.78
USP39-216ENST00000490193 ERICH6Q7L0X2 663 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 TDHQ8IZJ6 230 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 FAM9BQ8IZU0 186 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 DEFB123Q8N688 67 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 PDCD7Q8N8D1 485 aaKnown RBP10.15□□□□□ -0.78
USP39-216ENST00000490193 TRIB2Q92519 343 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 WDR18Q9BV38 432 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 COL25A1Q9BXS0 654 aaPredicted RBP10.15□□□□□ -0.78
USP39-216ENST00000490193 C11orf49Q9H6J7 331 aa10.15□□□□□ -0.78
USP39-216ENST00000490193 HERC5Q9UII4 1024 aaKnown RBP10.15□□□□□ -0.78
USP39-216ENST00000490193 ZMYND8Q9ULU4 1186 aaPredicted RBP10.15□□□□□ -0.78
USP39-216ENST00000490193 PA2G4Q9UQ80 394 aaKnown RBP10.15□□□□□ -0.78
USP39-216ENST00000490193 LAMA2P24043 3122 aaKnown RBP10.15□□□□□ -0.79
USP39-216ENST00000490193 DNAH12Q6ZR08 3092 aa10.15□□□□□ -0.79
USP39-216ENST00000490193 PFASO15067 1338 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 A0A1B0GUL7 405 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 LDHCP07864 332 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 COL6A1P12109 1028 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 HOXA7P31268 230 aaPredicted RBP10.14□□□□□ -0.79
USP39-216ENST00000490193 MAGEA10P43363 369 aaPredicted RBP10.14□□□□□ -0.79
USP39-216ENST00000490193 GSTO1P78417 241 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 SLFN5Q08AF3 891 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 RRP1BQ14684 758 aaKnown RBP10.14□□□□□ -0.79
USP39-216ENST00000490193 TRMT44Q8IYL2 757 aaKnown RBP10.14□□□□□ -0.79
USP39-216ENST00000490193 SOCS4Q8WXH5 440 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 NSUN4Q96CB9 384 aaKnown RBP10.14□□□□□ -0.79
USP39-216ENST00000490193 XAGE2Q96GT9 111 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 AS3MTQ9HBK9 375 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 MTMR10Q9NXD2 777 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 AKAP2Q9Y2D5 859 aa10.14□□□□□ -0.79
USP39-216ENST00000490193 MTX1Q13505 466 aa10.13□□□□□ -0.79
USP39-216ENST00000490193 METTL16Q86W50 562 aaKnown RBP10.13□□□□□ -0.79
USP39-216ENST00000490193 USP6NLQ92738 828 aa10.13□□□□□ -0.79
USP39-216ENST00000490193 NUDT12Q9BQG2 462 aa10.13□□□□□ -0.79
USP39-216ENST00000490193 SMC4Q9NTJ3 1288 aa10.13□□□□□ -0.79
USP39-216ENST00000490193 GINM1Q9NU53 330 aa10.13□□□□□ -0.79
USP39-216ENST00000490193 HMG20BQ9P0W2 317 aa10.13□□□□□ -0.79
USP39-216ENST00000490193 PCDHB8Q9UN66 801 aa10.13□□□□□ -0.79
USP39-216ENST00000490193 ASNSP08243 561 aa10.12□□□□□ -0.79
USP39-216ENST00000490193 CT47B1P0C2W7 299 aaPredicted RBP10.12□□□□□ -0.79
USP39-216ENST00000490193 SYN1P17600 705 aa10.12□□□□□ -0.79
USP39-216ENST00000490193 ARID4AP29374 1257 aaPredicted RBP10.12□□□□□ -0.79
USP39-216ENST00000490193 MAPK4P31152 587 aa10.12□□□□□ -0.79
USP39-216ENST00000490193 EMP3P54852 163 aa10.12□□□□□ -0.79
USP39-216ENST00000490193 BACE1P56817 501 aa10.12□□□□□ -0.79
USP39-216ENST00000490193 HERVK_113P62684 666 aa10.12□□□□□ -0.79
USP39-216ENST00000490193 IRX3P78415 501 aaPredicted RBP10.12□□□□□ -0.79
USP39-216ENST00000490193 Q7L0L9 218 aa10.12□□□□□ -0.79
USP39-216ENST00000490193 TRMT2AQ8IZ69 625 aaKnown RBP10.12□□□□□ -0.79
USP39-216ENST00000490193 SPATA5Q8NB90 893 aa10.12□□□□□ -0.79
USP39-216ENST00000490193 MEIS3Q99687 375 aa10.12□□□□□ -0.79
USP39-216ENST00000490193 API5Q9BZZ5 524 aaKnown RBP10.12□□□□□ -0.79
USP39-216ENST00000490193 DHX36Q9H2U1 1008 aaKnown RBP10.12□□□□□ -0.79
USP39-216ENST00000490193 PI4KBQ9UBF8 816 aa10.12□□□□□ -0.79
USP39-216ENST00000490193 C19orf81C9J6K1 198 aa10.11□□□□□ -0.79
USP39-216ENST00000490193 CYP2B6P20813 491 aa10.11□□□□□ -0.79
USP39-216ENST00000490193 CACNB2Q08289 660 aaPredicted RBP10.11□□□□□ -0.79
USP39-216ENST00000490193 TFCP2Q12800 502 aa10.11□□□□□ -0.79
USP39-216ENST00000490193 MTMR2Q13614 643 aa10.11□□□□□ -0.79
USP39-216ENST00000490193 FAM109BQ6ICB4 259 aaPredicted RBP10.11□□□□□ -0.79
USP39-216ENST00000490193 PI16Q6UXB8 463 aa10.11□□□□□ -0.79
USP39-216ENST00000490193 TEX11Q8IYF3 940 aa10.11□□□□□ -0.79
USP39-216ENST00000490193 GPRC5AQ8NFJ5 357 aa10.11□□□□□ -0.79
USP39-216ENST00000490193 GTF3C2Q8WUA4 911 aaPredicted RBP10.11□□□□□ -0.79
USP39-216ENST00000490193 P2RX7Q99572 595 aaKnown RBP10.11□□□□□ -0.79
USP39-216ENST00000490193 UBE2OQ9C0C9 1292 aaKnown RBP10.11□□□□□ -0.79
USP39-216ENST00000490193 TXNRD2Q9NNW7 524 aa10.11□□□□□ -0.79
USP39-216ENST00000490193 RBPJLQ9UBG7 517 aa10.11□□□□□ -0.79
USP39-216ENST00000490193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.11□□□□□ -0.79
USP39-216ENST00000490193 LTBP2Q14767 1821 aa10.11□□□□□ -0.79
USP39-216ENST00000490193 MYO5AQ9Y4I1 1855 aaKnown RBP10.1□□□□□ -0.79
USP39-216ENST00000490193 VCANP13611 3396 aa10.1□□□□□ -0.79
USP39-216ENST00000490193 SRGAP3O43295 1099 aa10.1□□□□□ -0.79
USP39-216ENST00000490193 IGSF3O75054 1194 aa10.1□□□□□ -0.79
USP39-216ENST00000490193 GNAI3P08754 354 aa10.1□□□□□ -0.79
USP39-216ENST00000490193 ZKSCAN1P17029 563 aaPredicted RBP10.1□□□□□ -0.79
USP39-216ENST00000490193 ERVK-9P63128 1117 aa10.1□□□□□ -0.79
USP39-216ENST00000490193 ERVK-24P63145 666 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms