RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 GPR101Q96P66 508 aaPredicted RBP18.03■□□□□ 0.48
BRD9-208ENST00000489816 SPATA31A1Q5TZJ5 1347 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 STRCQ7RTU9 1775 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 MYH3P11055 1940 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 ATRNO75882 1429 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 DEXIO95424 95 aa18.02■□□□□ 0.48
BRD9-208ENST00000489816 FBXO2Q9UK22 296 aaPredicted RBP18.02■□□□□ 0.48
BRD9-208ENST00000489816 MYH14Q7Z406 1995 aaKnown RBP18.02■□□□□ 0.48
BRD9-208ENST00000489816 ADKP55263 362 aaKnown RBP18.02■□□□□ 0.48
BRD9-208ENST00000489816 SAMSN1Q9NSI8 373 aaKnown RBP18.02■□□□□ 0.48
BRD9-208ENST00000489816 TUBE1Q9UJT0 475 aa18.02■□□□□ 0.48
BRD9-208ENST00000489816 POSTNQ15063 836 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 ZBTB9Q96C00 473 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 GNL3LQ9NVN8 582 aaKnown RBP18.01■□□□□ 0.47
BRD9-208ENST00000489816 MAN1B1Q9UKM7 699 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 NFE2L3Q9Y4A8 694 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 SRCAPQ6ZRS2 3230 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 ABCA3Q99758 1704 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 GNAT2P19087 354 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 MTERF4Q7Z6M4 381 aaKnown RBP18.01■□□□□ 0.47
BRD9-208ENST00000489816 CPLX3Q8WVH0 158 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 PPP1R13BQ96KQ4 1090 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 ZSCAN10Q96SZ4 725 aaPredicted RBP18.01■□□□□ 0.47
BRD9-208ENST00000489816 RIOK1Q9BRS2 568 aaKnown RBP18.01■□□□□ 0.47
BRD9-208ENST00000489816 RNF41Q9H4P4 317 aaPredicted RBP18.01■□□□□ 0.47
BRD9-208ENST00000489816 A0A087X0B3 334 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 CTIFO43310 598 aaKnown RBP18.01■□□□□ 0.47
BRD9-208ENST00000489816 GSDMDP57764 484 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 NYAP1Q6ZVC0 841 aa18.01■□□□□ 0.47
BRD9-208ENST00000489816 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.01■□□□□ 0.47
BRD9-208ENST00000489816 ELF2Q15723 593 aa18■□□□□ 0.47
BRD9-208ENST00000489816 AMIGO3Q86WK7 504 aa18■□□□□ 0.47
BRD9-208ENST00000489816 WASF1Q92558 559 aa18■□□□□ 0.47
BRD9-208ENST00000489816 OSBPL5Q9H0X9 879 aaPredicted RBP18■□□□□ 0.47
BRD9-208ENST00000489816 PAXBP1Q9Y5B6 917 aa18■□□□□ 0.47
BRD9-208ENST00000489816 NEMFO60524 1076 aa18■□□□□ 0.47
BRD9-208ENST00000489816 TOP1P11387 765 aaKnown RBP18■□□□□ 0.47
BRD9-208ENST00000489816 VWA3AA6NCI4 1184 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 PTPREP23469 700 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 MECOMQ03112 1051 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 SEC23AQ15436 765 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 KIF18AQ8NI77 898 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 DNAI1Q9UI46 699 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 ZNF652Q9Y2D9 606 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 PNPLA7Q6ZV29 1317 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 MYH2Q9UKX2 1941 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 CCDC196A0A1B0GTZ2 297 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 PKN1Q16512 942 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 RILPL1Q5EBL4 403 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 CTR9Q6PD62 1173 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 SMARCE1Q969G3 411 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 C4AP0C0L4 1744 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 C4BP0C0L5 1744 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 CATIPQ7Z7H3 387 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 TIGD1Q96MW7 591 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 INTS13Q9NVM9 706 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 MAPK8IP1Q9UQF2 711 aa17.99■□□□□ 0.47
BRD9-208ENST00000489816 COL1A1P02452 1464 aaPredicted RBP17.98■□□□□ 0.47
BRD9-208ENST00000489816 NBPF5PQ86XG9 351 aaPredicted RBP17.98■□□□□ 0.47
BRD9-208ENST00000489816 IQCA1Q86XH1 822 aa17.98■□□□□ 0.47
BRD9-208ENST00000489816 RASGRP4Q8TDF6 673 aa17.98■□□□□ 0.47
BRD9-208ENST00000489816 C8orf37Q96NL8 207 aa17.98■□□□□ 0.47
BRD9-208ENST00000489816 BLZF1Q9H2G9 400 aa17.98■□□□□ 0.47
BRD9-208ENST00000489816 BAZ2AQ9UIF9 1905 aaKnown RBP17.98■□□□□ 0.47
BRD9-208ENST00000489816 USP17L8P0C7I0 530 aa17.98■□□□□ 0.47
BRD9-208ENST00000489816 ANKRD7Q92527 254 aa17.98■□□□□ 0.47
BRD9-208ENST00000489816 MED15Q96RN5 788 aa17.98■□□□□ 0.47
BRD9-208ENST00000489816 MDM2Q00987 491 aaPredicted RBP17.97■□□□□ 0.47
BRD9-208ENST00000489816 DYNLL2Q96FJ2 89 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 BPIFA3Q9BQP9 254 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 DNAJC5Q9H3Z4 198 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 TRIM75PA6NK02 468 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 GNPATO15228 680 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 MCM7P33993 719 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 RPS8P62241 208 aaKnown RBP17.97■□□□□ 0.47
BRD9-208ENST00000489816 PIK3AP1Q6ZUJ8 805 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 FOXP1Q9H334 677 aaPredicted RBP17.97■□□□□ 0.47
BRD9-208ENST00000489816 CPVLQ9H3G5 476 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 ERCC6LQ2NKX8 1250 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 TMTC2Q8N394 836 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 SYMPKQ92797 1274 aaKnown RBP17.97■□□□□ 0.47
BRD9-208ENST00000489816 AK7Q96M32 723 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 DESI2Q9BSY9 194 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 MCM9Q9NXL9 1143 aa17.97■□□□□ 0.47
BRD9-208ENST00000489816 TSPY2A6NKD2 308 aa17.96■□□□□ 0.47
BRD9-208ENST00000489816 IKBKBO14920 756 aa17.96■□□□□ 0.47
BRD9-208ENST00000489816 RASGRP2Q7LDG7 609 aa17.96■□□□□ 0.47
BRD9-208ENST00000489816 SRBD1Q8N5C6 995 aaKnown RBP17.96■□□□□ 0.47
BRD9-208ENST00000489816 GPKOWQ92917 476 aaPredicted RBP eCLIP17.96■□□□□ 0.47
BRD9-208ENST00000489816 PLIN2Q99541 437 aa17.96■□□□□ 0.47
BRD9-208ENST00000489816 IMPACTQ9P2X3 320 aa17.96■□□□□ 0.47
BRD9-208ENST00000489816 DIXDC1Q155Q3 683 aa17.96■□□□□ 0.47
BRD9-208ENST00000489816 CCDC150Q8NCX0 1101 aa17.96■□□□□ 0.47
BRD9-208ENST00000489816 BSDC1Q9NW68 430 aaPredicted RBP17.96■□□□□ 0.47
BRD9-208ENST00000489816 TROAPQ12815 778 aa17.95■□□□□ 0.46
BRD9-208ENST00000489816 EEF2KMTQ96G04 330 aa17.95■□□□□ 0.46
BRD9-208ENST00000489816 SETDB2Q96T68 719 aa17.95■□□□□ 0.46
BRD9-208ENST00000489816 STK36Q9NRP7 1315 aa17.95■□□□□ 0.46
BRD9-208ENST00000489816 SLC44A5Q8NCS7 719 aa17.95■□□□□ 0.46
BRD9-208ENST00000489816 NSUN4Q96CB9 384 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms