RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 BAG3O95817 575 aa15.92■□□□□ 0.14
LTA-216ENST00000489638 PLCG2P16885 1265 aa15.92■□□□□ 0.14
LTA-216ENST00000489638 CYP2B6P20813 491 aa15.92■□□□□ 0.14
LTA-216ENST00000489638 BMP8BP34820 402 aa15.92■□□□□ 0.14
LTA-216ENST00000489638 HERVK_113P62684 666 aa15.92■□□□□ 0.14
LTA-216ENST00000489638 MAPKAPK5Q8IW41 473 aa15.92■□□□□ 0.14
LTA-216ENST00000489638 GPRC5AQ8NFJ5 357 aa15.92■□□□□ 0.14
LTA-216ENST00000489638 SOCS4Q8WXH5 440 aa15.92■□□□□ 0.14
LTA-216ENST00000489638 C11orf49Q9H6J7 331 aa15.92■□□□□ 0.14
LTA-216ENST00000489638 GDF11O95390 407 aa15.91■□□□□ 0.14
LTA-216ENST00000489638 PRKAR2AP13861 404 aaKnown RBP15.91■□□□□ 0.14
LTA-216ENST00000489638 TNNI3KQ59H18 835 aa15.91■□□□□ 0.14
LTA-216ENST00000489638 ATF7IPQ6VMQ6 1270 aa15.91■□□□□ 0.14
LTA-216ENST00000489638 DBNDD2Q9BQY9 259 aa15.91■□□□□ 0.14
LTA-216ENST00000489638 GPR108Q9NPR9 543 aa15.91■□□□□ 0.14
LTA-216ENST00000489638 PALD1Q9ULE6 856 aa15.91■□□□□ 0.14
LTA-216ENST00000489638 ZBTB21Q9ULJ3 1066 aa15.91■□□□□ 0.14
LTA-216ENST00000489638 FPGT-TNNI3KV9GXZ4 949 aa15.91■□□□□ 0.14
LTA-216ENST00000489638 C19orf81C9J6K1 198 aa15.9■□□□□ 0.14
LTA-216ENST00000489638 IPO8O15397 1037 aaKnown RBP15.9■□□□□ 0.14
LTA-216ENST00000489638 CYP2E1P05181 493 aaPredicted RBP15.9■□□□□ 0.14
LTA-216ENST00000489638 XRCC5P13010 732 aaKnown RBP15.9■□□□□ 0.14
LTA-216ENST00000489638 POLA2Q14181 598 aa15.9■□□□□ 0.14
LTA-216ENST00000489638 TTC39AQ5SRH9 613 aa15.9■□□□□ 0.14
LTA-216ENST00000489638 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
LTA-216ENST00000489638 FOXP4Q8IVH2 680 aaPredicted RBP15.9■□□□□ 0.14
LTA-216ENST00000489638 USP6NLQ92738 828 aa15.9■□□□□ 0.14
LTA-216ENST00000489638 NUDT12Q9BQG2 462 aa15.9■□□□□ 0.14
LTA-216ENST00000489638 GINM1Q9NU53 330 aa15.9■□□□□ 0.14
LTA-216ENST00000489638 RBPJLQ9UBG7 517 aa15.9■□□□□ 0.14
LTA-216ENST00000489638 PFASO15067 1338 aa15.9■□□□□ 0.14
LTA-216ENST00000489638 USP17L10C9JJH3 530 aa15.89■□□□□ 0.13
LTA-216ENST00000489638 SYN1P17600 705 aa15.89■□□□□ 0.13
LTA-216ENST00000489638 MAPK4P31152 587 aa15.89■□□□□ 0.13
LTA-216ENST00000489638 CRACR2BQ8N4Y2 399 aaPredicted RBP15.89■□□□□ 0.13
LTA-216ENST00000489638 CLUAP1Q96AJ1 413 aa15.89■□□□□ 0.13
LTA-216ENST00000489638 TRIM34Q9BYJ4 488 aa15.89■□□□□ 0.13
LTA-216ENST00000489638 PORCNQ9H237 461 aa15.89■□□□□ 0.13
LTA-216ENST00000489638 EMILIN3Q9NT22 766 aa15.89■□□□□ 0.13
LTA-216ENST00000489638 BCAR3O75815 825 aa15.88■□□□□ 0.13
LTA-216ENST00000489638 ZKSCAN1P17029 563 aaPredicted RBP15.88■□□□□ 0.13
LTA-216ENST00000489638 MAGEA10P43363 369 aaPredicted RBP15.88■□□□□ 0.13
LTA-216ENST00000489638 ERVK-9P63128 1117 aa15.88■□□□□ 0.13
LTA-216ENST00000489638 ERVK-24P63145 666 aa15.88■□□□□ 0.13
LTA-216ENST00000489638 Q3C1V9 767 aa15.88■□□□□ 0.13
LTA-216ENST00000489638 CCDC158Q5M9N0 1113 aa15.88■□□□□ 0.13
LTA-216ENST00000489638 SLC17A8Q8NDX2 589 aa15.88■□□□□ 0.13
LTA-216ENST00000489638 FRAT1Q92837 279 aaPredicted RBP15.88■□□□□ 0.13
LTA-216ENST00000489638 ZNF512BQ96KM6 892 aaPredicted RBP15.88■□□□□ 0.13
LTA-216ENST00000489638 PIH1D3Q9NQM4 214 aaKnown RBP15.88■□□□□ 0.13
LTA-216ENST00000489638 SAP30BPQ9UHR5 308 aaKnown RBP15.88■□□□□ 0.13
LTA-216ENST00000489638 MYO5AQ9Y4I1 1855 aaKnown RBP15.88■□□□□ 0.13
LTA-216ENST00000489638 IGSF3O75054 1194 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 COL6A1P12109 1028 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 ZAP70P43403 619 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 CACNB2Q08289 660 aaPredicted RBP15.87■□□□□ 0.13
LTA-216ENST00000489638 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 CCL14Q16627 93 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 MORN1Q5T089 497 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 GPR153Q6NV75 609 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 GPR142Q7Z601 462 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 TRMT44Q8IYL2 757 aaKnown RBP15.87■□□□□ 0.13
LTA-216ENST00000489638 SSH3Q8TE77 659 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 GTF3C2Q8WUA4 911 aaPredicted RBP15.87■□□□□ 0.13
LTA-216ENST00000489638 PAGR1Q9BTK6 254 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 HLA-DOAP06340 250 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 CCND3P30281 292 aaPredicted RBP15.87■□□□□ 0.13
LTA-216ENST00000489638 RGS2P41220 211 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 DYNLL1P63167 89 aaKnown RBP15.87■□□□□ 0.13
LTA-216ENST00000489638 LRIT3Q3SXY7 679 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 LHX8Q68G74 356 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 TMEM57Q8N5G2 664 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 C12orf42Q96LP6 360 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 APBA2Q99767 749 aa15.87■□□□□ 0.13
LTA-216ENST00000489638 DBNLQ9UJU6 430 aaKnown RBP15.87■□□□□ 0.13
LTA-216ENST00000489638 DLL1O00548 723 aa15.86■□□□□ 0.13
LTA-216ENST00000489638 GH2P01242 217 aa15.86■□□□□ 0.13
LTA-216ENST00000489638 OS9Q13438 667 aaPredicted RBP15.86■□□□□ 0.13
LTA-216ENST00000489638 USP17L2Q6R6M4 530 aa15.86■□□□□ 0.13
LTA-216ENST00000489638 PLEKHH3Q7Z736 793 aa15.86■□□□□ 0.13
LTA-216ENST00000489638 TDHQ8IZJ6 230 aa15.86■□□□□ 0.13
LTA-216ENST00000489638 TLR7Q9NYK1 1049 aaKnown RBP15.86■□□□□ 0.13
LTA-216ENST00000489638 COL6A3P12111 3177 aa15.85■□□□□ 0.13
LTA-216ENST00000489638 SURF6O75683 361 aaKnown RBP15.85■□□□□ 0.13
LTA-216ENST00000489638 CNMDO75829 334 aa15.85■□□□□ 0.13
LTA-216ENST00000489638 CYP7A1P22680 504 aa15.85■□□□□ 0.13
LTA-216ENST00000489638 ATP8B2P98198 1209 aa15.85■□□□□ 0.13
LTA-216ENST00000489638 TATDN1Q6P1N9 297 aa15.85■□□□□ 0.13
LTA-216ENST00000489638 Q7L0L9 218 aa15.85■□□□□ 0.13
LTA-216ENST00000489638 MAP2K5Q13163 448 aa15.84■□□□□ 0.13
LTA-216ENST00000489638 LRRC26Q2I0M4 334 aa15.84■□□□□ 0.13
LTA-216ENST00000489638 ZKSCAN2Q63HK3 967 aa15.84■□□□□ 0.13
LTA-216ENST00000489638 CCAR1Q8IX12 1150 aaKnown RBP15.84■□□□□ 0.13
LTA-216ENST00000489638 DEFB123Q8N688 67 aa15.84■□□□□ 0.13
LTA-216ENST00000489638 MIGA1Q8NAN2 632 aa15.84■□□□□ 0.13
LTA-216ENST00000489638 FEZ1Q99689 392 aa15.84■□□□□ 0.13
LTA-216ENST00000489638 EHD4Q9H223 541 aa15.84■□□□□ 0.13
LTA-216ENST00000489638 C1orf115Q9H7X2 142 aa15.84■□□□□ 0.13
LTA-216ENST00000489638 NOP58Q9Y2X3 529 aaKnown RBP15.84■□□□□ 0.13
LTA-216ENST00000489638 RABGAP1Q9Y3P9 1069 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms