RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 GDF11O95390 407 aa20.83■□□□□ 0.93
TOP3B-217ENST00000489581 PLCG2P16885 1265 aa20.83■□□□□ 0.93
TOP3B-217ENST00000489581 HOXA7P31268 230 aaPredicted RBP20.83■□□□□ 0.93
TOP3B-217ENST00000489581 MNX1P50219 401 aaPredicted RBP20.83■□□□□ 0.93
TOP3B-217ENST00000489581 ATF7IPQ6VMQ6 1270 aa20.83■□□□□ 0.93
TOP3B-217ENST00000489581 ADGRA1Q86SQ6 560 aa20.83■□□□□ 0.93
TOP3B-217ENST00000489581 FOXP4Q8IVH2 680 aaPredicted RBP20.83■□□□□ 0.93
TOP3B-217ENST00000489581 CRACR2BQ8N4Y2 399 aaPredicted RBP20.83■□□□□ 0.93
TOP3B-217ENST00000489581 DBNDD2Q9BQY9 259 aa20.83■□□□□ 0.93
TOP3B-217ENST00000489581 TRIM34Q9BYJ4 488 aa20.83■□□□□ 0.93
TOP3B-217ENST00000489581 NBPF3Q9H094 633 aa20.83■□□□□ 0.93
TOP3B-217ENST00000489581 PALD1Q9ULE6 856 aa20.83■□□□□ 0.93
TOP3B-217ENST00000489581 MAST2Q6P0Q8 1798 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 FLT1P17948 1338 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 C19orf81C9J6K1 198 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 SYN1P17600 705 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 PPP4CP60510 307 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 HERVK_113P62684 666 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 TNNI3KQ59H18 835 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 CCDC158Q5M9N0 1113 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 SLC17A8Q8NDX2 589 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 GPRC5AQ8NFJ5 357 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 GDF15Q99988 308 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 NUDT12Q9BQG2 462 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 C11orf49Q9H6J7 331 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 SAP30BPQ9UHR5 308 aaKnown RBP20.82■□□□□ 0.92
TOP3B-217ENST00000489581 FPGT-TNNI3KV9GXZ4 949 aa20.82■□□□□ 0.92
TOP3B-217ENST00000489581 MYH1P12882 1939 aa20.81■□□□□ 0.92
TOP3B-217ENST00000489581 USP17L10C9JJH3 530 aa20.81■□□□□ 0.92
TOP3B-217ENST00000489581 CYP2E1P05181 493 aaPredicted RBP20.81■□□□□ 0.92
TOP3B-217ENST00000489581 PRKAR2AP13861 404 aaKnown RBP20.81■□□□□ 0.92
TOP3B-217ENST00000489581 Q3C1V9 767 aa20.81■□□□□ 0.92
TOP3B-217ENST00000489581 METTL16Q86W50 562 aaKnown RBP20.81■□□□□ 0.92
TOP3B-217ENST00000489581 OGDHLQ9ULD0 1010 aa20.81■□□□□ 0.92
TOP3B-217ENST00000489581 COL6A3P12111 3177 aa20.81■□□□□ 0.92
TOP3B-217ENST00000489581 BMP8BP34820 402 aa20.8■□□□□ 0.92
TOP3B-217ENST00000489581 OS9Q13438 667 aaPredicted RBP20.8■□□□□ 0.92
TOP3B-217ENST00000489581 GPR108Q9NPR9 543 aa20.8■□□□□ 0.92
TOP3B-217ENST00000489581 RBPJLQ9UBG7 517 aa20.8■□□□□ 0.92
TOP3B-217ENST00000489581 ZAP70P43403 619 aa20.79■□□□□ 0.92
TOP3B-217ENST00000489581 DYNLL1P63167 89 aaKnown RBP20.79■□□□□ 0.92
TOP3B-217ENST00000489581 POLA2Q14181 598 aa20.79■□□□□ 0.92
TOP3B-217ENST00000489581 MAP3K21Q5TCX8 1036 aa20.79■□□□□ 0.92
TOP3B-217ENST00000489581 CCAR1Q8IX12 1150 aaKnown RBP20.79■□□□□ 0.92
TOP3B-217ENST00000489581 SOCS4Q8WXH5 440 aa20.79■□□□□ 0.92
TOP3B-217ENST00000489581 PAGR1Q9BTK6 254 aa20.79■□□□□ 0.92
TOP3B-217ENST00000489581 ZBTB21Q9ULJ3 1066 aa20.79■□□□□ 0.92
TOP3B-217ENST00000489581 XRCC5P13010 732 aaKnown RBP20.78■□□□□ 0.92
TOP3B-217ENST00000489581 MAPK4P31152 587 aa20.78■□□□□ 0.92
TOP3B-217ENST00000489581 ERVK-9P63128 1117 aa20.78■□□□□ 0.92
TOP3B-217ENST00000489581 ERVK-24P63145 666 aa20.78■□□□□ 0.92
TOP3B-217ENST00000489581 PDE3AQ14432 1141 aa20.78■□□□□ 0.92
TOP3B-217ENST00000489581 TMEM57Q8N5G2 664 aa20.78■□□□□ 0.92
TOP3B-217ENST00000489581 PORCNQ9H237 461 aa20.78■□□□□ 0.92
TOP3B-217ENST00000489581 PIH1D3Q9NQM4 214 aaKnown RBP20.78■□□□□ 0.92
TOP3B-217ENST00000489581 EMILIN3Q9NT22 766 aa20.78■□□□□ 0.92
TOP3B-217ENST00000489581 GINM1Q9NU53 330 aa20.78■□□□□ 0.92
TOP3B-217ENST00000489581 SURF6O75683 361 aaKnown RBP20.77■□□□□ 0.92
TOP3B-217ENST00000489581 HLA-DOAP06340 250 aa20.77■□□□□ 0.92
TOP3B-217ENST00000489581 ZKSCAN1P17029 563 aaPredicted RBP20.77■□□□□ 0.92
TOP3B-217ENST00000489581 MAGEA10P43363 369 aaPredicted RBP20.77■□□□□ 0.92
TOP3B-217ENST00000489581 ATP8B2P98198 1209 aa20.77■□□□□ 0.92
TOP3B-217ENST00000489581 CACNB2Q08289 660 aaPredicted RBP20.77■□□□□ 0.92
TOP3B-217ENST00000489581 CCL14Q16627 93 aa20.77■□□□□ 0.92
TOP3B-217ENST00000489581 POTEEQ6S8J3 1075 aa20.77■□□□□ 0.92
TOP3B-217ENST00000489581 GPR142Q7Z601 462 aa20.77■□□□□ 0.92
TOP3B-217ENST00000489581 PFASO15067 1338 aa20.77■□□□□ 0.91
TOP3B-217ENST00000489581 DLL1O00548 723 aa20.76■□□□□ 0.91
TOP3B-217ENST00000489581 GH2P01242 217 aa20.76■□□□□ 0.91
TOP3B-217ENST00000489581 CYP7A1P22680 504 aa20.76■□□□□ 0.91
TOP3B-217ENST00000489581 ZYXQ15942 572 aaKnown RBP20.76■□□□□ 0.91
TOP3B-217ENST00000489581 USP17L2Q6R6M4 530 aa20.76■□□□□ 0.91
TOP3B-217ENST00000489581 SSH3Q8TE77 659 aa20.76■□□□□ 0.91
TOP3B-217ENST00000489581 USP6NLQ92738 828 aa20.76■□□□□ 0.91
TOP3B-217ENST00000489581 CCND3P30281 292 aaPredicted RBP20.75■□□□□ 0.91
TOP3B-217ENST00000489581 MORN1Q5T089 497 aa20.75■□□□□ 0.91
TOP3B-217ENST00000489581 PLEKHH3Q7Z736 793 aa20.75■□□□□ 0.91
TOP3B-217ENST00000489581 TRMT44Q8IYL2 757 aaKnown RBP20.75■□□□□ 0.91
TOP3B-217ENST00000489581 ZNF512BQ96KM6 892 aaPredicted RBP20.75■□□□□ 0.91
TOP3B-217ENST00000489581 C1orf115Q9H7X2 142 aa20.75■□□□□ 0.91
TOP3B-217ENST00000489581 RGS2P41220 211 aa20.74■□□□□ 0.91
TOP3B-217ENST00000489581 MIGA1Q8NAN2 632 aa20.74■□□□□ 0.91
TOP3B-217ENST00000489581 GTF3C2Q8WUA4 911 aaPredicted RBP20.74■□□□□ 0.91
TOP3B-217ENST00000489581 CCDC8Q9H0W5 538 aaPredicted RBP20.74■□□□□ 0.91
TOP3B-217ENST00000489581 CWC22Q9HCG8 908 aaKnown RBP20.74■□□□□ 0.91
TOP3B-217ENST00000489581 TLR7Q9NYK1 1049 aaKnown RBP20.74■□□□□ 0.91
TOP3B-217ENST00000489581 DBNLQ9UJU6 430 aaKnown RBP20.74■□□□□ 0.91
TOP3B-217ENST00000489581 IDH1O75874 414 aaKnown RBP20.73■□□□□ 0.91
TOP3B-217ENST00000489581 USP5P45974 858 aa20.73■□□□□ 0.91
TOP3B-217ENST00000489581 ZKSCAN2Q63HK3 967 aa20.73■□□□□ 0.91
TOP3B-217ENST00000489581 LHX8Q68G74 356 aa20.73■□□□□ 0.91
TOP3B-217ENST00000489581 Q7L0L9 218 aa20.73■□□□□ 0.91
TOP3B-217ENST00000489581 DEFB123Q8N688 67 aa20.73■□□□□ 0.91
TOP3B-217ENST00000489581 FEZ1Q99689 392 aa20.73■□□□□ 0.91
TOP3B-217ENST00000489581 NDUFB9Q9Y6M9 179 aa20.73■□□□□ 0.91
TOP3B-217ENST00000489581 FRMPD3Q5JV73 1810 aa20.72■□□□□ 0.91
TOP3B-217ENST00000489581 COL6A1P12109 1028 aa20.72■□□□□ 0.91
TOP3B-217ENST00000489581 TDHQ8IZJ6 230 aa20.72■□□□□ 0.91
TOP3B-217ENST00000489581 APBA2Q99767 749 aa20.72■□□□□ 0.91
TOP3B-217ENST00000489581 UBE2OQ9C0C9 1292 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms