RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 ITPRIPQ8IWB1 547 aa9.8□□□□□ -0.84
SMC6-209ENST00000489535 TMEM57Q8N5G2 664 aa9.8□□□□□ -0.84
SMC6-209ENST00000489535 CICQ96RK0 1608 aaPredicted RBP9.8□□□□□ -0.84
SMC6-209ENST00000489535 ABCC4O15439 1325 aa9.8□□□□□ -0.84
SMC6-209ENST00000489535 PTPRCP08575 1304 aa9.8□□□□□ -0.84
SMC6-209ENST00000489535 PXDNLA1KZ92 1463 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 CASZ1Q86V15 1759 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 DEAF1O75398 565 aaPredicted RBP9.79□□□□□ -0.84
SMC6-209ENST00000489535 SKIP12755 728 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 EIF2S2P20042 333 aaKnown RBP9.79□□□□□ -0.84
SMC6-209ENST00000489535 ABL2P42684 1182 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 PLAURQ03405 335 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 FZD5Q13467 585 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 G2E3Q7L622 706 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 FAM35AQ86V20 835 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 TTC5Q8N0Z6 440 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 DDX19BQ9UMR2 479 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.79□□□□□ -0.84
SMC6-209ENST00000489535 ZNF831Q5JPB2 1677 aa9.79□□□□□ -0.84
SMC6-209ENST00000489535 MYH3P11055 1940 aa9.78□□□□□ -0.84
SMC6-209ENST00000489535 KIAA1324LA8MWY0 1029 aaPredicted RBP9.78□□□□□ -0.84
SMC6-209ENST00000489535 NFKB1P19838 968 aa9.78□□□□□ -0.84
SMC6-209ENST00000489535 AAMPQ13685 434 aa9.78□□□□□ -0.84
SMC6-209ENST00000489535 VPS72Q15906 364 aa9.78□□□□□ -0.84
SMC6-209ENST00000489535 DDB1Q16531 1140 aa9.78□□□□□ -0.84
SMC6-209ENST00000489535 FNBP4Q8N3X1 1017 aaPredicted RBP9.78□□□□□ -0.84
SMC6-209ENST00000489535 CHMP4AQ9BY43 222 aa9.78□□□□□ -0.84
SMC6-209ENST00000489535 FRRS1LQ9P0K9 344 aa9.78□□□□□ -0.84
SMC6-209ENST00000489535 RNF114Q9Y508 228 aa9.78□□□□□ -0.84
SMC6-209ENST00000489535 LY75O60449 1722 aa9.78□□□□□ -0.84
SMC6-209ENST00000489535 MYH14Q7Z406 1995 aaKnown RBP9.77□□□□□ -0.84
SMC6-209ENST00000489535 PRAMEF22A3QJZ6 481 aa9.77□□□□□ -0.85
SMC6-209ENST00000489535 CPB1P15086 417 aa9.77□□□□□ -0.85
SMC6-209ENST00000489535 GP2P55259 537 aaKnown RBP9.77□□□□□ -0.85
SMC6-209ENST00000489535 TMOD3Q9NYL9 352 aa9.77□□□□□ -0.85
SMC6-209ENST00000489535 AFF2P51816 1311 aa9.77□□□□□ -0.85
SMC6-209ENST00000489535 RREB1Q92766 1687 aa9.77□□□□□ -0.85
SMC6-209ENST00000489535 AK9Q5TCS8 1911 aa9.76□□□□□ -0.85
SMC6-209ENST00000489535 DLL1O00548 723 aa9.76□□□□□ -0.85
SMC6-209ENST00000489535 FLIIQ13045 1269 aa9.76□□□□□ -0.85
SMC6-209ENST00000489535 FKBP5Q13451 457 aaPredicted RBP9.76□□□□□ -0.85
SMC6-209ENST00000489535 WFDC8Q8IUA0 241 aa9.76□□□□□ -0.85
SMC6-209ENST00000489535 ZNF496Q96IT1 587 aaPredicted RBP9.76□□□□□ -0.85
SMC6-209ENST00000489535 PHAXQ9H814 394 aaKnown RBP9.76□□□□□ -0.85
SMC6-209ENST00000489535 CHPF2Q9P2E5 772 aa9.76□□□□□ -0.85
SMC6-209ENST00000489535 CHMP3Q9Y3E7 222 aa9.76□□□□□ -0.85
SMC6-209ENST00000489535 BCL9O00512 1426 aa9.75□□□□□ -0.85
SMC6-209ENST00000489535 ATRNO75882 1429 aa9.75□□□□□ -0.85
SMC6-209ENST00000489535 ANXA1P04083 346 aa9.75□□□□□ -0.85
SMC6-209ENST00000489535 CCINQ13939 588 aa9.75□□□□□ -0.85
SMC6-209ENST00000489535 PERM1Q5SV97 790 aa9.75□□□□□ -0.85
SMC6-209ENST00000489535 PNMA5Q96PV4 448 aa9.75□□□□□ -0.85
SMC6-209ENST00000489535 CHMP4BQ9H444 224 aaKnown RBP9.75□□□□□ -0.85
SMC6-209ENST00000489535 AKTIPQ9H8T0 292 aa9.75□□□□□ -0.85
SMC6-209ENST00000489535 DBF4Q9UBU7 674 aaPredicted RBP9.75□□□□□ -0.85
SMC6-209ENST00000489535 KIAA1024Q9UPX6 916 aa9.75□□□□□ -0.85
SMC6-209ENST00000489535 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
SMC6-209ENST00000489535 F6X3S4 739 aa9.74□□□□□ -0.85
SMC6-209ENST00000489535 ZBTB7BO15156 539 aaPredicted RBP9.74□□□□□ -0.85
SMC6-209ENST00000489535 ALX3O95076 343 aa9.74□□□□□ -0.85
SMC6-209ENST00000489535 SNRPA1P09661 255 aaKnown RBP9.74□□□□□ -0.85
SMC6-209ENST00000489535 INTS3Q68E01 1043 aaKnown RBP9.74□□□□□ -0.85
SMC6-209ENST00000489535 SLC4A10Q6U841 1118 aa9.74□□□□□ -0.85
SMC6-209ENST00000489535 CENPQQ7L2Z9 268 aaPredicted RBP9.74□□□□□ -0.85
SMC6-209ENST00000489535 MARCH10Q8NA82 808 aaPredicted RBP9.74□□□□□ -0.85
SMC6-209ENST00000489535 TPCN2Q8NHX9 752 aa9.74□□□□□ -0.85
SMC6-209ENST00000489535 KDM2BQ8NHM5 1336 aa9.74□□□□□ -0.85
SMC6-209ENST00000489535 ZBTB42B2RXF5 422 aa9.73□□□□□ -0.85
SMC6-209ENST00000489535 PROSER3Q2NL68 480 aa9.73□□□□□ -0.85
SMC6-209ENST00000489535 ALDH16A1Q8IZ83 802 aa9.73□□□□□ -0.85
SMC6-209ENST00000489535 PIGBQ92521 554 aa9.73□□□□□ -0.85
SMC6-209ENST00000489535 TTC9Q92623 222 aa9.73□□□□□ -0.85
SMC6-209ENST00000489535 SYTL4Q96C24 671 aaPredicted RBP9.73□□□□□ -0.85
SMC6-209ENST00000489535 DDX21Q9NR30 783 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMC6-209ENST00000489535 ZBTB40Q9NUA8 1239 aa9.73□□□□□ -0.85
SMC6-209ENST00000489535 USP16Q9Y5T5 823 aa9.73□□□□□ -0.85
SMC6-209ENST00000489535 PTCD1O75127 700 aaKnown RBP9.72□□□□□ -0.85
SMC6-209ENST00000489535 IGHDP01880 384 aa9.72□□□□□ -0.85
SMC6-209ENST00000489535 MYL6BP14649 208 aa9.72□□□□□ -0.85
SMC6-209ENST00000489535 GRNP28799 593 aaKnown RBP9.72□□□□□ -0.85
SMC6-209ENST00000489535 CCT4P50991 539 aaKnown RBP9.72□□□□□ -0.85
SMC6-209ENST00000489535 PCSK7Q16549 785 aa9.72□□□□□ -0.85
SMC6-209ENST00000489535 DEPDC4Q8N2C3 294 aa9.72□□□□□ -0.85
SMC6-209ENST00000489535 TMEM130Q8N3G9 435 aa9.72□□□□□ -0.85
SMC6-209ENST00000489535 ACSBG1Q96GR2 724 aa9.72□□□□□ -0.85
SMC6-209ENST00000489535 HYPKQ9NX55 129 aa9.72□□□□□ -0.85
SMC6-209ENST00000489535 TRPC5Q9UL62 973 aaPredicted RBP9.72□□□□□ -0.85
SMC6-209ENST00000489535 ADCY9O60503 1353 aa9.72□□□□□ -0.85
SMC6-209ENST00000489535 TUBGCP6Q96RT7 1819 aa9.71□□□□□ -0.85
SMC6-209ENST00000489535 C21orf2O43822 256 aa9.71□□□□□ -0.86
SMC6-209ENST00000489535 ADAMTS4O75173 837 aa9.71□□□□□ -0.86
SMC6-209ENST00000489535 MAP3K6O95382 1288 aa9.71□□□□□ -0.86
SMC6-209ENST00000489535 TGFB1P01137 390 aa9.71□□□□□ -0.86
SMC6-209ENST00000489535 IER5Q5VY09 327 aa9.71□□□□□ -0.86
SMC6-209ENST00000489535 RWDD1Q9H446 243 aaPredicted RBP9.71□□□□□ -0.86
SMC6-209ENST00000489535 C1orf115Q9H7X2 142 aa9.71□□□□□ -0.86
SMC6-209ENST00000489535 ATG3Q9NT62 314 aa9.71□□□□□ -0.86
SMC6-209ENST00000489535 ASAP1Q9ULH1 1129 aa9.71□□□□□ -0.86
SMC6-209ENST00000489535 ATP10DQ9P241 1426 aa9.71□□□□□ -0.86
SMC6-209ENST00000489535 SPEF2Q9C093 1822 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms