RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CYP2B6P20813 491 aa11.61□□□□□ -0.55
SSBP1-212ENST00000489378 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
SSBP1-212ENST00000489378 FKBP5Q13451 457 aaPredicted RBP11.61□□□□□ -0.55
SSBP1-212ENST00000489378 DIXDC1Q155Q3 683 aa11.61□□□□□ -0.55
SSBP1-212ENST00000489378 SUGT1Q9Y2Z0 365 aa11.61□□□□□ -0.55
SSBP1-212ENST00000489378 DOCK1Q14185 1865 aa11.61□□□□□ -0.55
SSBP1-212ENST00000489378 APAF1O14727 1248 aa11.6□□□□□ -0.55
SSBP1-212ENST00000489378 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
SSBP1-212ENST00000489378 TBC1D12O60347 775 aa11.6□□□□□ -0.55
SSBP1-212ENST00000489378 CCND3P30281 292 aaPredicted RBP11.6□□□□□ -0.55
SSBP1-212ENST00000489378 RALBP1Q15311 655 aa11.6□□□□□ -0.55
SSBP1-212ENST00000489378 RYDENQ9NUL5 291 aaKnown RBP11.6□□□□□ -0.55
SSBP1-212ENST00000489378 TK2O00142 265 aa11.6□□□□□ -0.55
SSBP1-212ENST00000489378 CACNB2Q08289 660 aaPredicted RBP11.6□□□□□ -0.55
SSBP1-212ENST00000489378 MAP3K12Q12852 859 aa11.6□□□□□ -0.55
SSBP1-212ENST00000489378 CAVIN4Q5BKX8 364 aa11.6□□□□□ -0.55
SSBP1-212ENST00000489378 SH3BP5LQ7L8J4 393 aa11.6□□□□□ -0.55
SSBP1-212ENST00000489378 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
SSBP1-212ENST00000489378 PNMA3Q9UL41 463 aa11.6□□□□□ -0.55
SSBP1-212ENST00000489378 FRMPD3Q5JV73 1810 aa11.59□□□□□ -0.55
SSBP1-212ENST00000489378 F6X3S4 739 aa11.59□□□□□ -0.55
SSBP1-212ENST00000489378 PEX10O60683 326 aa11.59□□□□□ -0.55
SSBP1-212ENST00000489378 GCLCP48506 637 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-212ENST00000489378 SMAD3P84022 425 aaKnown RBP11.59□□□□□ -0.55
SSBP1-212ENST00000489378 TWISTNBQ3B726 338 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-212ENST00000489378 BEND3Q5T5X7 828 aa11.59□□□□□ -0.55
SSBP1-212ENST00000489378 SENP6Q9GZR1 1112 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-212ENST00000489378 LRRFIP2Q9Y608 721 aaKnown RBP11.59□□□□□ -0.55
SSBP1-212ENST00000489378 LOC285556D6RIA3 1793 aa11.58□□□□□ -0.56
SSBP1-212ENST00000489378 MROH5Q6ZUA9 1318 aa11.58□□□□□ -0.56
SSBP1-212ENST00000489378 GRM8O00222 908 aa11.58□□□□□ -0.56
SSBP1-212ENST00000489378 CTNND1O60716 968 aaKnown RBP11.58□□□□□ -0.56
SSBP1-212ENST00000489378 RGS3P49796 1198 aa11.58□□□□□ -0.56
SSBP1-212ENST00000489378 MAP3K10Q02779 954 aa11.58□□□□□ -0.56
SSBP1-212ENST00000489378 CCL14Q16627 93 aa11.58□□□□□ -0.56
SSBP1-212ENST00000489378 LRRC24Q50LG9 513 aa11.58□□□□□ -0.56
SSBP1-212ENST00000489378 PPP4R3BQ5MIZ7 849 aa11.58□□□□□ -0.56
SSBP1-212ENST00000489378 PPP1R15BQ5SWA1 713 aa11.58□□□□□ -0.56
SSBP1-212ENST00000489378 VGLL2Q8N8G2 317 aa11.58□□□□□ -0.56
SSBP1-212ENST00000489378 ASCC2Q9H1I8 757 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-212ENST00000489378 MYBBP1AQ9BQG0 1328 aaKnown RBP11.57□□□□□ -0.56
SSBP1-212ENST00000489378 XRCC5P13010 732 aaKnown RBP11.57□□□□□ -0.56
SSBP1-212ENST00000489378 ZKSCAN1P17029 563 aaPredicted RBP11.57□□□□□ -0.56
SSBP1-212ENST00000489378 METTL24Q5JXM2 366 aa11.57□□□□□ -0.56
SSBP1-212ENST00000489378 PROCA1Q8NCQ7 364 aaPredicted RBP11.57□□□□□ -0.56
SSBP1-212ENST00000489378 KAZALD1Q96I82 304 aa11.57□□□□□ -0.56
SSBP1-212ENST00000489378 MORF4L1Q9UBU8 362 aa11.57□□□□□ -0.56
SSBP1-212ENST00000489378 PRKAG2Q9UGJ0 569 aa11.57□□□□□ -0.56
SSBP1-212ENST00000489378 MYH13Q9UKX3 1938 aa11.57□□□□□ -0.56
SSBP1-212ENST00000489378 PIEZO1Q92508 2521 aa11.57□□□□□ -0.56
SSBP1-212ENST00000489378 DDTLA6NHG4 134 aaPredicted RBP11.56□□□□□ -0.56
SSBP1-212ENST00000489378 PRDX5P30044 214 aa11.56□□□□□ -0.56
SSBP1-212ENST00000489378 HMGCS2P54868 508 aa11.56□□□□□ -0.56
SSBP1-212ENST00000489378 RTP1P59025 263 aa11.56□□□□□ -0.56
SSBP1-212ENST00000489378 SPP2Q13103 211 aa11.56□□□□□ -0.56
SSBP1-212ENST00000489378 MYO9BQ13459 2157 aa11.56□□□□□ -0.56
SSBP1-212ENST00000489378 GRIN2CQ14957 1233 aa11.56□□□□□ -0.56
SSBP1-212ENST00000489378 ZSCAN29Q8IWY8 852 aaPredicted RBP11.56□□□□□ -0.56
SSBP1-212ENST00000489378 NUDT12Q9BQG2 462 aa11.56□□□□□ -0.56
SSBP1-212ENST00000489378 CACNA1FO60840 1977 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 ENTPD3O75355 529 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 PDE8BO95263 885 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 WDR66Q8TBY9 1149 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 SOCS4Q8WXH5 440 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 USP6NLQ92738 828 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 BADQ92934 168 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 SUCLG2Q96I99 432 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 TXNRD2Q9NNW7 524 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
SSBP1-212ENST00000489378 FAM196BA6NMK8 535 aa11.54□□□□□ -0.56
SSBP1-212ENST00000489378 TRMT44Q8IYL2 757 aaKnown RBP11.54□□□□□ -0.56
SSBP1-212ENST00000489378 ADAMTS19Q8TE59 1207 aa11.54□□□□□ -0.56
SSBP1-212ENST00000489378 PRDM5Q9NQX1 630 aaPredicted RBP11.54□□□□□ -0.56
SSBP1-212ENST00000489378 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
SSBP1-212ENST00000489378 FGFR2P21802 821 aa11.53□□□□□ -0.56
SSBP1-212ENST00000489378 ZEB1P37275 1124 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-212ENST00000489378 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.56
SSBP1-212ENST00000489378 ZNF280CQ8ND82 737 aa11.53□□□□□ -0.56
SSBP1-212ENST00000489378 DDX4Q9NQI0 724 aaKnown RBP11.53□□□□□ -0.56
SSBP1-212ENST00000489378 C9orf78Q9NZ63 289 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-212ENST00000489378 RLFQ13129 1914 aa11.53□□□□□ -0.56
SSBP1-212ENST00000489378 KIF16BQ96L93 1317 aa11.53□□□□□ -0.56
SSBP1-212ENST00000489378 MYH2Q9UKX2 1941 aa11.53□□□□□ -0.56
SSBP1-212ENST00000489378 LDHBP07195 334 aaKnown RBP11.52□□□□□ -0.56
SSBP1-212ENST00000489378 PDE4AP27815 886 aa11.52□□□□□ -0.56
SSBP1-212ENST00000489378 RGS2P41220 211 aa11.52□□□□□ -0.56
SSBP1-212ENST00000489378 PDE3AQ14432 1141 aa11.52□□□□□ -0.56
SSBP1-212ENST00000489378 MORN1Q5T089 497 aa11.52□□□□□ -0.56
SSBP1-212ENST00000489378 GPRC5AQ8NFJ5 357 aa11.52□□□□□ -0.56
SSBP1-212ENST00000489378 KLHDC4Q8TBB5 520 aa11.52□□□□□ -0.56
SSBP1-212ENST00000489378 PPM1EQ8WY54 764 aa11.52□□□□□ -0.56
SSBP1-212ENST00000489378 ASB2Q96Q27 587 aa11.52□□□□□ -0.56
SSBP1-212ENST00000489378 P2RX7Q99572 595 aaKnown RBP11.52□□□□□ -0.56
SSBP1-212ENST00000489378 PORCNQ9H237 461 aa11.52□□□□□ -0.56
SSBP1-212ENST00000489378 FLRT1Q9NZU1 646 aa11.52□□□□□ -0.56
SSBP1-212ENST00000489378 IFIT1P09914 478 aaKnown RBP11.52□□□□□ -0.57
SSBP1-212ENST00000489378 EPHB4P54760 987 aa11.52□□□□□ -0.57
SSBP1-212ENST00000489378 IRX3P78415 501 aaPredicted RBP11.52□□□□□ -0.57
SSBP1-212ENST00000489378 PICALMQ13492 652 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms