RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 GMPRP36959 345 aa10.7□□□□□ -0.7
TRAPPC12-221ENST00000489032 SIK1P57059 783 aa10.7□□□□□ -0.7
TRAPPC12-221ENST00000489032 MLLT1Q03111 559 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-221ENST00000489032 USPL1Q5W0Q7 1092 aa10.7□□□□□ -0.7
TRAPPC12-221ENST00000489032 FBXO33Q7Z6M2 555 aa10.7□□□□□ -0.7
TRAPPC12-221ENST00000489032 TRPM4Q8TD43 1214 aa10.7□□□□□ -0.7
TRAPPC12-221ENST00000489032 MAP2P11137 1827 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-221ENST00000489032 RBM47A0AV96 593 aaKnown RBP10.69□□□□□ -0.7
TRAPPC12-221ENST00000489032 GADD45BO75293 160 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-221ENST00000489032 EIF2AK2P19525 551 aaKnown RBP10.69□□□□□ -0.7
TRAPPC12-221ENST00000489032 ADH7P40394 386 aa10.69□□□□□ -0.7
TRAPPC12-221ENST00000489032 HSP90AB2PQ58FF8 381 aa10.69□□□□□ -0.7
TRAPPC12-221ENST00000489032 MSL1Q68DK7 614 aa10.69□□□□□ -0.7
TRAPPC12-221ENST00000489032 HFE2Q6ZVN8 426 aa10.69□□□□□ -0.7
TRAPPC12-221ENST00000489032 FAM35AQ86V20 835 aa10.69□□□□□ -0.7
TRAPPC12-221ENST00000489032 GALNT12Q8IXK2 581 aa10.69□□□□□ -0.7
TRAPPC12-221ENST00000489032 ELOA3CA0A087WX78 387 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 ELOA3DA6NLF2 546 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 IL2RBP14784 551 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 RBM25P49756 843 aaKnown RBP10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 MTHFSP49914 203 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 HTRA3P83110 453 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 RALBP1Q15311 655 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 ELOA3BQ3SY89 546 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 TREML4Q6UXN2 200 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 COL23A1Q86Y22 540 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 ELOA3Q8NG57 546 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 CFAP53Q96M91 514 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 MRS2Q9HD23 443 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 NPHS2Q9NP85 383 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 PPP4R2Q9NY27 417 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 SALL4Q9UJQ4 1053 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 SPG7Q9UQ90 795 aa10.68□□□□□ -0.7
TRAPPC12-221ENST00000489032 FAM208AQ9UK61 1670 aaKnown RBP10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 IGSF1Q8N6C5 1336 aa10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 ADARB2-AS1A8MUL3 147 aa10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 J3QW42 95 aa10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 HOXD8P13378 290 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 CPB1P15086 417 aa10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 ZNF16P17020 682 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 KRT76Q01546 638 aa10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 ELMSAN1Q6PJG2 1045 aa10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 SLCO4C1Q6ZQN7 724 aa10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 C16orf71Q8IYS4 520 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 DUSP9Q99956 384 aaKnown RBP10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 KLF15Q9UIH9 416 aa10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 SLC6A14Q9UN76 642 aa10.67□□□□□ -0.7
TRAPPC12-221ENST00000489032 PCNTO95613 3336 aa10.66□□□□□ -0.7
TRAPPC12-221ENST00000489032 KIF4AO95239 1232 aa10.66□□□□□ -0.7
TRAPPC12-221ENST00000489032 FSTL1Q12841 308 aa10.66□□□□□ -0.7
TRAPPC12-221ENST00000489032 FCHSD1Q86WN1 690 aa10.66□□□□□ -0.7
TRAPPC12-221ENST00000489032 GALNT6Q8NCL4 622 aa10.66□□□□□ -0.7
TRAPPC12-221ENST00000489032 FRMD6Q96NE9 622 aa10.66□□□□□ -0.7
TRAPPC12-221ENST00000489032 NMRK2Q9NPI5 230 aa10.66□□□□□ -0.7
TRAPPC12-221ENST00000489032 LY75O60449 1722 aa10.66□□□□□ -0.7
TRAPPC12-221ENST00000489032 ZBTB42B2RXF5 422 aa10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 PPP2R1AP30153 589 aa10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 MAP3K10Q02779 954 aa10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 PSMD2Q13200 908 aa10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 DIEXFQ68CQ4 756 aaKnown RBP10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 EPS8L3Q8TE67 593 aaKnown RBP10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 RAPGEF4Q8WZA2 1011 aa10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 ACDQ96AP0 544 aa10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 SYTL4Q96C24 671 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 EHD4Q9H223 541 aa10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 PARP2Q9UGN5 583 aa10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 CCNL1Q9UK58 526 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC12-221ENST00000489032 FAM177BA6PVY3 158 aa10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 DIAPH1O60610 1272 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 SMNDC1O75940 238 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 HSPA1AP0DMV8 641 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 HSPA1BP0DMV9 641 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 AMPD1P23109 780 aa10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 TAGLNQ01995 201 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 EIF4A2Q14240 407 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 NBPF6Q5VWK0 638 aa10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 FLAD1Q8NFF5 587 aa10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 EDARADDQ8WWZ3 215 aa10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 NBPF4Q96M43 638 aa10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 SETDB2Q96T68 719 aa10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 OSMRQ99650 979 aa10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 CICQ96RK0 1608 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-221ENST00000489032 GIPC1O14908 333 aa10.63□□□□□ -0.71
TRAPPC12-221ENST00000489032 BCRP11274 1271 aa10.63□□□□□ -0.71
TRAPPC12-221ENST00000489032 EPXP11678 715 aa10.63□□□□□ -0.71
TRAPPC12-221ENST00000489032 HMGB2P26583 209 aaKnown RBP10.63□□□□□ -0.71
TRAPPC12-221ENST00000489032 USHBP1Q8N6Y0 703 aa10.63□□□□□ -0.71
TRAPPC12-221ENST00000489032 NUDCQ9Y266 331 aa10.63□□□□□ -0.71
TRAPPC12-221ENST00000489032 MYBBP1AQ9BQG0 1328 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-221ENST00000489032 ANP32CO43423 234 aa10.62□□□□□ -0.71
TRAPPC12-221ENST00000489032 RGS9O75916 674 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC12-221ENST00000489032 SLURP2P0DP57 97 aa10.62□□□□□ -0.71
TRAPPC12-221ENST00000489032 GNA15P30679 374 aa10.62□□□□□ -0.71
TRAPPC12-221ENST00000489032 IRS1P35568 1242 aa10.62□□□□□ -0.71
TRAPPC12-221ENST00000489032 CEP120Q8N960 986 aa10.62□□□□□ -0.71
TRAPPC12-221ENST00000489032 DDX54Q8TDD1 881 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-221ENST00000489032 ENAMQ9NRM1 1142 aa10.62□□□□□ -0.71
TRAPPC12-221ENST00000489032 U2SURPO15042 1029 aaKnown RBP10.61□□□□□ -0.71
TRAPPC12-221ENST00000489032 OIP5O43482 229 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms