RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 BTBD19C9JJ37 291 aa15.42■□□□□ 0.06
PHF1-210ENST00000488767 USP17L12C9JPN9 530 aa15.42■□□□□ 0.06
PHF1-210ENST00000488767 USP17L21D6R901 530 aa15.42■□□□□ 0.06
PHF1-210ENST00000488767 PABPC4Q13310 644 aaKnown RBP eCLIP15.42■□□□□ 0.06
PHF1-210ENST00000488767 ABCB5Q2M3G0 1257 aa15.42■□□□□ 0.06
PHF1-210ENST00000488767 TATDN1Q6P1N9 297 aa15.42■□□□□ 0.06
PHF1-210ENST00000488767 CENPQQ7L2Z9 268 aaPredicted RBP15.42■□□□□ 0.06
PHF1-210ENST00000488767 ANKRD23Q86SG2 305 aa15.42■□□□□ 0.06
PHF1-210ENST00000488767 PTPN18Q99952 460 aa15.42■□□□□ 0.06
PHF1-210ENST00000488767 DNAJC18Q9H819 358 aa15.42■□□□□ 0.06
PHF1-210ENST00000488767 HELLSQ9NRZ9 838 aa15.42■□□□□ 0.06
PHF1-210ENST00000488767 ZBTB21Q9ULJ3 1066 aa15.42■□□□□ 0.06
PHF1-210ENST00000488767 LAMB1P07942 1786 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 A0A0G2JLL6 359 aaPredicted RBP15.41■□□□□ 0.06
PHF1-210ENST00000488767 M0R2C6 588 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 GPR25O00155 361 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 PDHXO00330 501 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 MPHOSPH10O00566 681 aaKnown RBP15.41■□□□□ 0.06
PHF1-210ENST00000488767 FKTNO75072 461 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 GH2P01242 217 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 SLC3A2P08195 630 aaKnown RBP15.41■□□□□ 0.06
PHF1-210ENST00000488767 SPP2Q13103 211 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 CRHR2Q13324 411 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 RAB3GAP1Q15042 981 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 ARHGEF6Q15052 776 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 C12orf60Q5U649 245 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 PRRT2Q7Z6L0 340 aaPredicted RBP15.41■□□□□ 0.06
PHF1-210ENST00000488767 PROCA1Q8NCQ7 364 aaPredicted RBP15.41■□□□□ 0.06
PHF1-210ENST00000488767 PARK7Q99497 189 aaKnown RBP15.41■□□□□ 0.06
PHF1-210ENST00000488767 FEZ1Q99689 392 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 WDR18Q9BV38 432 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 NAPBQ9H115 298 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 DIAPH3Q9NSV4 1193 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 TMOD4Q9NZQ9 345 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 PNMA3Q9UL41 463 aa15.41■□□□□ 0.06
PHF1-210ENST00000488767 GSG1L2A8MUP6 293 aa15.4■□□□□ 0.06
PHF1-210ENST00000488767 MINDY4BA8MYZ0 360 aa15.4■□□□□ 0.06
PHF1-210ENST00000488767 CYP2D6P10635 497 aa15.4■□□□□ 0.06
PHF1-210ENST00000488767 MCMDC2Q4G0Z9 681 aa15.4■□□□□ 0.06
PHF1-210ENST00000488767 SBK1Q52WX2 424 aa15.4■□□□□ 0.06
PHF1-210ENST00000488767 CTR9Q6PD62 1173 aa15.4■□□□□ 0.06
PHF1-210ENST00000488767 FAM43AQ8N2R8 423 aa15.4■□□□□ 0.06
PHF1-210ENST00000488767 ZNF296Q8WUU4 475 aaPredicted RBP15.4■□□□□ 0.06
PHF1-210ENST00000488767 DDX60LQ5H9U9 1706 aaKnown RBP15.4■□□□□ 0.06
PHF1-210ENST00000488767 C19orf81C9J6K1 198 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 USP17L10C9JJH3 530 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 SHMT1P34896 483 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 GABPAQ06546 454 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 CCDC84Q86UT8 332 aaPredicted RBP15.39■□□□□ 0.05
PHF1-210ENST00000488767 IFNL3Q8IZI9 196 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 ERO1AQ96HE7 468 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 CCDC136Q96JN2 1154 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 CCDC17Q96LX7 622 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 MKNK2Q9HBH9 465 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.39■□□□□ 0.05
PHF1-210ENST00000488767 AGTPBP1Q9UPW5 1226 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 SLC45A1Q9Y2W3 748 aa15.39■□□□□ 0.05
PHF1-210ENST00000488767 SIPA1L1O43166 1804 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 TLR2O60603 784 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 SDSP20132 328 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 USP14P54578 494 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 HMGCS2P54868 508 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 BACE1P56817 501 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 MTMR2Q13614 643 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 RRP1BQ14684 758 aaKnown RBP15.38■□□□□ 0.05
PHF1-210ENST00000488767 KIF22Q14807 665 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 TMEM179Q6ZVK1 233 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 C16orf86Q6ZW13 317 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 SMCR8Q8TEV9 937 aaPredicted RBP15.38■□□□□ 0.05
PHF1-210ENST00000488767 SEC62Q99442 399 aaKnown RBP15.38■□□□□ 0.05
PHF1-210ENST00000488767 SH2D4AQ9H788 454 aa15.38■□□□□ 0.05
PHF1-210ENST00000488767 OSBPP22059 807 aa15.37■□□□□ 0.05
PHF1-210ENST00000488767 CDK8P49336 464 aa15.37■□□□□ 0.05
PHF1-210ENST00000488767 SP3Q02447 781 aa15.37■□□□□ 0.05
PHF1-210ENST00000488767 PDE4BQ07343 736 aa15.37■□□□□ 0.05
PHF1-210ENST00000488767 DGKZQ13574 1117 aa15.37■□□□□ 0.05
PHF1-210ENST00000488767 TTC22Q5TAA0 569 aa15.37■□□□□ 0.05
PHF1-210ENST00000488767 CTU1Q7Z7A3 348 aaKnown RBP15.37■□□□□ 0.05
PHF1-210ENST00000488767 DYNLL2Q96FJ2 89 aa15.37■□□□□ 0.05
PHF1-210ENST00000488767 ATAD5Q96QE3 1844 aa15.36■□□□□ 0.05
PHF1-210ENST00000488767 CYP2D7A0A087X1C5 515 aa15.36■□□□□ 0.05
PHF1-210ENST00000488767 NMIQ13287 307 aaPredicted RBP15.36■□□□□ 0.05
PHF1-210ENST00000488767 PKN2Q16513 984 aaKnown RBP15.36■□□□□ 0.05
PHF1-210ENST00000488767 SH3D19Q5HYK7 790 aa15.36■□□□□ 0.05
PHF1-210ENST00000488767 USP17L2Q6R6M4 530 aa15.36■□□□□ 0.05
PHF1-210ENST00000488767 CCDC129Q6ZRS4 1044 aa15.36■□□□□ 0.05
PHF1-210ENST00000488767 SLC44A5Q8NCS7 719 aa15.36■□□□□ 0.05
PHF1-210ENST00000488767 FAM227BQ96M60 508 aa15.36■□□□□ 0.05
PHF1-210ENST00000488767 ARHGEF10LQ9HCE6 1279 aa15.36■□□□□ 0.05
PHF1-210ENST00000488767 EPB41L4AQ9HCS5 686 aaPredicted RBP15.36■□□□□ 0.05
PHF1-210ENST00000488767 CCDC171Q6TFL3 1326 aa15.36■□□□□ 0.05
PHF1-210ENST00000488767 A0A0D9SFI3 127 aa15.35■□□□□ 0.05
PHF1-210ENST00000488767 PDE4AP27815 886 aa15.35■□□□□ 0.05
PHF1-210ENST00000488767 IRX3P78415 501 aaPredicted RBP15.35■□□□□ 0.05
PHF1-210ENST00000488767 MOGSQ13724 837 aa15.35■□□□□ 0.05
PHF1-210ENST00000488767 CWC27Q6UX04 472 aaKnown RBP15.35■□□□□ 0.05
PHF1-210ENST00000488767 ZNF444Q8N0Y2 327 aaPredicted RBP15.35■□□□□ 0.05
PHF1-210ENST00000488767 RUFY2Q8WXA3 655 aa15.35■□□□□ 0.05
PHF1-210ENST00000488767 ROBO3Q96MS0 1386 aa15.35■□□□□ 0.05
PHF1-210ENST00000488767 JAG1P78504 1218 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms