RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 RBM8AQ9Y5S9 174 aaKnown RBP22.91■■□□□ 1.26
CCM2-216ENST00000488727 U3KPZ7 1027 aaPredicted RBP22.91■■□□□ 1.26
CCM2-216ENST00000488727 MAP3K9P80192 1104 aa22.9■■□□□ 1.26
CCM2-216ENST00000488727 HTRA3P83110 453 aa22.9■■□□□ 1.26
CCM2-216ENST00000488727 VGLL4Q14135 290 aa22.9■■□□□ 1.26
CCM2-216ENST00000488727 SHROOM1Q2M3G4 852 aaPredicted RBP22.9■■□□□ 1.26
CCM2-216ENST00000488727 SWAP70Q9UH65 585 aa22.9■■□□□ 1.26
CCM2-216ENST00000488727 CTNNA3Q9UI47 895 aa22.9■■□□□ 1.26
CCM2-216ENST00000488727 ABT1Q9ULW3 272 aaKnown RBP22.9■■□□□ 1.26
CCM2-216ENST00000488727 JAG1P78504 1218 aa22.89■■□□□ 1.26
CCM2-216ENST00000488727 TBC1D10CQ8IV04 446 aa22.89■■□□□ 1.26
CCM2-216ENST00000488727 ANKRD13AQ8IZ07 590 aa22.89■■□□□ 1.26
CCM2-216ENST00000488727 IL17RAQ96F46 866 aa22.89■■□□□ 1.26
CCM2-216ENST00000488727 INCENPQ9NQS7 918 aa22.89■■□□□ 1.26
CCM2-216ENST00000488727 TAOK2Q9UL54 1235 aa22.88■■□□□ 1.25
CCM2-216ENST00000488727 ZNF213O14771 459 aa22.88■■□□□ 1.25
CCM2-216ENST00000488727 CTNND1O60716 968 aaKnown RBP22.88■■□□□ 1.25
CCM2-216ENST00000488727 GDF11O95390 407 aa22.88■■□□□ 1.25
CCM2-216ENST00000488727 CYP21A2P08686 494 aa22.88■■□□□ 1.25
CCM2-216ENST00000488727 HSPA6P17066 643 aa22.88■■□□□ 1.25
CCM2-216ENST00000488727 CAP2P40123 477 aa22.88■■□□□ 1.25
CCM2-216ENST00000488727 RAB3GAP1Q15042 981 aa22.88■■□□□ 1.25
CCM2-216ENST00000488727 IMMTQ16891 758 aaKnown RBP22.88■■□□□ 1.25
CCM2-216ENST00000488727 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.88■■□□□ 1.25
CCM2-216ENST00000488727 SNCAIPQ9Y6H5 919 aa22.88■■□□□ 1.25
CCM2-216ENST00000488727 PRDM1O75626 825 aa22.87■■□□□ 1.25
CCM2-216ENST00000488727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.87■■□□□ 1.25
CCM2-216ENST00000488727 TAF6LQ9Y6J9 622 aa22.87■■□□□ 1.25
CCM2-216ENST00000488727 ST18O60284 1047 aa22.86■■□□□ 1.25
CCM2-216ENST00000488727 RASA1P20936 1047 aa22.86■■□□□ 1.25
CCM2-216ENST00000488727 NECTIN1Q15223 517 aa22.86■■□□□ 1.25
CCM2-216ENST00000488727 CERKLQ49MI3 558 aaPredicted RBP22.86■■□□□ 1.25
CCM2-216ENST00000488727 NOL9Q5SY16 702 aaKnown RBP22.86■■□□□ 1.25
CCM2-216ENST00000488727 SCYL3Q8IZE3 742 aa22.86■■□□□ 1.25
CCM2-216ENST00000488727 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.86■■□□□ 1.25
CCM2-216ENST00000488727 CSADQ9Y600 493 aa22.86■■□□□ 1.25
CCM2-216ENST00000488727 PHIPQ8WWQ0 1821 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 UNCXA6NJT0 531 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 SLC3A2P08195 630 aaKnown RBP22.85■■□□□ 1.25
CCM2-216ENST00000488727 FGRP09769 529 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 ELP3Q9H9T3 547 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 GREB1LQ9C091 1923 aaPredicted RBP22.85■■□□□ 1.25
CCM2-216ENST00000488727 DDX11L8A8MPP1 907 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 HSP90AA1P07900 732 aaKnown RBP22.85■■□□□ 1.25
CCM2-216ENST00000488727 ANAPC15P60006 121 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 PDE4BQ07343 736 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 AKNAD1Q5T1N1 836 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 STAG1Q8WVM7 1258 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 CNKSR2Q8WXI2 1034 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 MKNK2Q9HBH9 465 aa22.85■■□□□ 1.25
CCM2-216ENST00000488727 RASSF10A6NK89 507 aa22.84■■□□□ 1.25
CCM2-216ENST00000488727 AKR1B1P15121 316 aa22.84■■□□□ 1.25
CCM2-216ENST00000488727 MCCP23508 829 aa22.84■■□□□ 1.25
CCM2-216ENST00000488727 IL27Q8NEV9 243 aa22.84■■□□□ 1.25
CCM2-216ENST00000488727 NKX2-3Q8TAU0 364 aa22.84■■□□□ 1.25
CCM2-216ENST00000488727 HHIPL1Q96JK4 782 aa22.84■■□□□ 1.25
CCM2-216ENST00000488727 NEDD4P46934 1319 aa22.84■■□□□ 1.25
CCM2-216ENST00000488727 SLC27A2O14975 620 aa22.83■■□□□ 1.25
CCM2-216ENST00000488727 GH2P01242 217 aa22.83■■□□□ 1.25
CCM2-216ENST00000488727 ABCB5Q2M3G0 1257 aa22.83■■□□□ 1.25
CCM2-216ENST00000488727 CREB3L3Q68CJ9 461 aa22.83■■□□□ 1.25
CCM2-216ENST00000488727 RGMBQ6NW40 437 aa22.83■■□□□ 1.25
CCM2-216ENST00000488727 CCDC84Q86UT8 332 aaPredicted RBP22.83■■□□□ 1.25
CCM2-216ENST00000488727 ZBTB21Q9ULJ3 1066 aa22.83■■□□□ 1.25
CCM2-216ENST00000488727 ORC4O43929 436 aa22.82■■□□□ 1.24
CCM2-216ENST00000488727 ZNF157P51786 506 aaPredicted RBP22.82■■□□□ 1.24
CCM2-216ENST00000488727 SLC10A4Q96EP9 437 aa22.82■■□□□ 1.24
CCM2-216ENST00000488727 ZNF287Q9HBT7 754 aa22.82■■□□□ 1.24
CCM2-216ENST00000488727 PTPRAP18433 802 aa22.82■■□□□ 1.24
CCM2-216ENST00000488727 GUCY1A2P33402 732 aa22.82■■□□□ 1.24
CCM2-216ENST00000488727 MFSD6Q6ZSS7 791 aa22.82■■□□□ 1.24
CCM2-216ENST00000488727 CCDC17Q96LX7 622 aa22.82■■□□□ 1.24
CCM2-216ENST00000488727 SPDYE5A6NIY4 337 aa22.81■■□□□ 1.24
CCM2-216ENST00000488727 MPHOSPH10O00566 681 aaKnown RBP22.81■■□□□ 1.24
CCM2-216ENST00000488727 ASNSP08243 561 aa22.81■■□□□ 1.24
CCM2-216ENST00000488727 GJA5P36382 358 aa22.81■■□□□ 1.24
CCM2-216ENST00000488727 DEFB115Q30KQ5 88 aa22.81■■□□□ 1.24
CCM2-216ENST00000488727 STOX1Q6ZVD7 989 aa22.81■■□□□ 1.24
CCM2-216ENST00000488727 RASAL3Q86YV0 1011 aa22.81■■□□□ 1.24
CCM2-216ENST00000488727 TNPO1Q92973 898 aaKnown RBP22.81■■□□□ 1.24
CCM2-216ENST00000488727 RNF41Q9H4P4 317 aaPredicted RBP22.81■■□□□ 1.24
CCM2-216ENST00000488727 PICK1Q9NRD5 415 aa22.81■■□□□ 1.24
CCM2-216ENST00000488727 TOMM22Q9NS69 142 aa22.81■■□□□ 1.24
CCM2-216ENST00000488727 FAM47AQ5JRC9 791 aa22.8■■□□□ 1.24
CCM2-216ENST00000488727 RRP12Q5JTH9 1297 aaKnown RBP22.8■■□□□ 1.24
CCM2-216ENST00000488727 CYP4F22Q6NT55 531 aa22.8■■□□□ 1.24
CCM2-216ENST00000488727 ZNF444Q8N0Y2 327 aaPredicted RBP22.8■■□□□ 1.24
CCM2-216ENST00000488727 OPTNQ96CV9 577 aa22.8■■□□□ 1.24
CCM2-216ENST00000488727 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.8■■□□□ 1.24
CCM2-216ENST00000488727 FAM155AB1AL88 458 aaPredicted RBP22.79■■□□□ 1.24
CCM2-216ENST00000488727 PCP11498 1178 aaKnown RBP22.79■■□□□ 1.24
CCM2-216ENST00000488727 PTMSP20962 102 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 HSPA4P34932 840 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 SEPT2Q15019 361 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 ERO1BQ86YB8 467 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 RASEFQ8IZ41 740 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 OTUD5Q96G74 571 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 WNK4Q96J92 1243 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 GBP4Q96PP9 640 aa22.79■■□□□ 1.24
CCM2-216ENST00000488727 CABP5Q9NP86 173 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 669.6 ms