RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 TTC41PQ6P2S7 1318 aa28.6■■■□□ 2.17
RNF38-208ENST00000488058 ERC2O15083 957 aa28.59■■■□□ 2.17
RNF38-208ENST00000488058 AAMPQ13685 434 aa28.59■■■□□ 2.17
RNF38-208ENST00000488058 KBTBD3Q8NAB2 608 aa28.59■■■□□ 2.17
RNF38-208ENST00000488058 ARHGAP39Q9C0H5 1083 aa28.59■■■□□ 2.17
RNF38-208ENST00000488058 AGTPBP1Q9UPW5 1226 aa28.59■■■□□ 2.17
RNF38-208ENST00000488058 LOC285556D6RIA3 1793 aa28.59■■■□□ 2.17
RNF38-208ENST00000488058 GH2P01242 217 aa28.58■■■□□ 2.17
RNF38-208ENST00000488058 MX1P20591 662 aa28.58■■■□□ 2.17
RNF38-208ENST00000488058 LACTBP83111 547 aaPredicted RBP28.58■■■□□ 2.17
RNF38-208ENST00000488058 TREML2Q5T2D2 321 aa28.58■■■□□ 2.17
RNF38-208ENST00000488058 GINM1Q9NU53 330 aa28.58■■■□□ 2.17
RNF38-208ENST00000488058 PTPN22Q9Y2R2 807 aa28.58■■■□□ 2.17
RNF38-208ENST00000488058 BAZ2AQ9UIF9 1905 aaKnown RBP28.58■■■□□ 2.17
RNF38-208ENST00000488058 ADGRA2Q96PE1 1338 aa28.58■■■□□ 2.17
RNF38-208ENST00000488058 CYP2D6P10635 497 aa28.57■■■□□ 2.16
RNF38-208ENST00000488058 SOX10P56693 466 aa28.57■■■□□ 2.16
RNF38-208ENST00000488058 EVX2Q03828 476 aa28.57■■■□□ 2.16
RNF38-208ENST00000488058 MTMR2Q13614 643 aa28.57■■■□□ 2.16
RNF38-208ENST00000488058 TATDN1Q6P1N9 297 aa28.57■■■□□ 2.16
RNF38-208ENST00000488058 PROCA1Q8NCQ7 364 aaPredicted RBP28.57■■■□□ 2.16
RNF38-208ENST00000488058 WDR18Q9BV38 432 aa28.57■■■□□ 2.16
RNF38-208ENST00000488058 PUS7LQ9H0K6 701 aaKnown RBP28.57■■■□□ 2.16
RNF38-208ENST00000488058 SLC45A1Q9Y2W3 748 aa28.57■■■□□ 2.16
RNF38-208ENST00000488058 SLC4A4Q9Y6R1 1079 aa28.57■■■□□ 2.16
RNF38-208ENST00000488058 GLRX3O76003 335 aaKnown RBP28.56■■■□□ 2.16
RNF38-208ENST00000488058 CERKLQ49MI3 558 aaPredicted RBP28.56■■■□□ 2.16
RNF38-208ENST00000488058 PI4K2BQ8TCG2 481 aa28.56■■■□□ 2.16
RNF38-208ENST00000488058 SMCR8Q8TEV9 937 aaPredicted RBP28.56■■■□□ 2.16
RNF38-208ENST00000488058 ATP8A2Q9NTI2 1148 aa28.56■■■□□ 2.16
RNF38-208ENST00000488058 DDRGK1Q96HY6 314 aa28.55■■■□□ 2.16
RNF38-208ENST00000488058 TMOD4Q9NZQ9 345 aa28.55■■■□□ 2.16
RNF38-208ENST00000488058 PNMA3Q9UL41 463 aa28.55■■■□□ 2.16
RNF38-208ENST00000488058 SHMT1P34896 483 aa28.54■■■□□ 2.16
RNF38-208ENST00000488058 RAB3GAP1Q15042 981 aa28.54■■■□□ 2.16
RNF38-208ENST00000488058 ABCB5Q2M3G0 1257 aa28.54■■■□□ 2.16
RNF38-208ENST00000488058 AMOTL1Q8IY63 956 aa28.54■■■□□ 2.16
RNF38-208ENST00000488058 RWDD1Q9H446 243 aaPredicted RBP28.54■■■□□ 2.16
RNF38-208ENST00000488058 CABP5Q9NP86 173 aa28.54■■■□□ 2.16
RNF38-208ENST00000488058 USP17L10C9JJH3 530 aa28.53■■■□□ 2.16
RNF38-208ENST00000488058 RNF113AO15541 343 aaKnown RBP28.53■■■□□ 2.16
RNF38-208ENST00000488058 BACE1P56817 501 aa28.53■■■□□ 2.16
RNF38-208ENST00000488058 SH3D19Q5HYK7 790 aa28.53■■■□□ 2.16
RNF38-208ENST00000488058 APPBP2Q92624 585 aa28.53■■■□□ 2.16
RNF38-208ENST00000488058 MYH8P13535 1937 aa28.53■■■□□ 2.16
RNF38-208ENST00000488058 PSMC4P43686 418 aa28.52■■■□□ 2.16
RNF38-208ENST00000488058 GABPAQ06546 454 aa28.52■■■□□ 2.16
RNF38-208ENST00000488058 PABPC4Q13310 644 aaKnown RBP eCLIP28.52■■■□□ 2.16
RNF38-208ENST00000488058 FSD1Q9BTV5 496 aa28.52■■■□□ 2.16
RNF38-208ENST00000488058 MPHOSPH10O00566 681 aaKnown RBP28.51■■■□□ 2.15
RNF38-208ENST00000488058 FMNL1O95466 1100 aaPredicted RBP28.51■■■□□ 2.15
RNF38-208ENST00000488058 ZFYP08048 801 aaPredicted RBP28.51■■■□□ 2.15
RNF38-208ENST00000488058 BCRP11274 1271 aa28.51■■■□□ 2.15
RNF38-208ENST00000488058 OSBPP22059 807 aa28.51■■■□□ 2.15
RNF38-208ENST00000488058 LRRFIP1Q32MZ4 808 aaKnown RBP28.51■■■□□ 2.15
RNF38-208ENST00000488058 B4GALNT3Q6L9W6 998 aa28.51■■■□□ 2.15
RNF38-208ENST00000488058 SLC44A5Q8NCS7 719 aa28.51■■■□□ 2.15
RNF38-208ENST00000488058 DYNLL2Q96FJ2 89 aa28.51■■■□□ 2.15
RNF38-208ENST00000488058 FEZ1Q99689 392 aa28.51■■■□□ 2.15
RNF38-208ENST00000488058 PTCH2Q9Y6C5 1203 aa28.51■■■□□ 2.15
RNF38-208ENST00000488058 SALL3Q9BXA9 1300 aa28.5■■■□□ 2.15
RNF38-208ENST00000488058 CYP2D7A0A087X1C5 515 aa28.5■■■□□ 2.15
RNF38-208ENST00000488058 C19orf81C9J6K1 198 aa28.5■■■□□ 2.15
RNF38-208ENST00000488058 CTGFP29279 349 aa28.5■■■□□ 2.15
RNF38-208ENST00000488058 ZYXQ15942 572 aaKnown RBP28.5■■■□□ 2.15
RNF38-208ENST00000488058 OSBP2Q969R2 916 aa28.5■■■□□ 2.15
RNF38-208ENST00000488058 LNPKQ9C0E8 428 aa28.5■■■□□ 2.15
RNF38-208ENST00000488058 USP17L12C9JPN9 530 aa28.49■■■□□ 2.15
RNF38-208ENST00000488058 USP17L21D6R901 530 aa28.49■■■□□ 2.15
RNF38-208ENST00000488058 ANKRD13CQ8N6S4 541 aa28.49■■■□□ 2.15
RNF38-208ENST00000488058 TRIM47Q96LD4 638 aa28.49■■■□□ 2.15
RNF38-208ENST00000488058 STRBPQ96SI9 672 aaKnown RBP28.49■■■□□ 2.15
RNF38-208ENST00000488058 MGAMO43451 1857 aa28.49■■■□□ 2.15
RNF38-208ENST00000488058 ASCC2Q9H1I8 757 aaPredicted RBP28.48■■■□□ 2.15
RNF38-208ENST00000488058 SWAP70Q9UH65 585 aa28.48■■■□□ 2.15
RNF38-208ENST00000488058 SMIM22K7EJ46 135 aa28.47■■■□□ 2.15
RNF38-208ENST00000488058 GNRH1P01148 92 aa28.47■■■□□ 2.15
RNF38-208ENST00000488058 IGHDP01880 384 aa28.47■■■□□ 2.15
RNF38-208ENST00000488058 FCGRTP55899 365 aa28.47■■■□□ 2.15
RNF38-208ENST00000488058 IRX6P78412 446 aaPredicted RBP28.47■■■□□ 2.15
RNF38-208ENST00000488058 IRX3P78415 501 aaPredicted RBP28.47■■■□□ 2.15
RNF38-208ENST00000488058 C12orf60Q5U649 245 aa28.47■■■□□ 2.15
RNF38-208ENST00000488058 USP17L2Q6R6M4 530 aa28.47■■■□□ 2.15
RNF38-208ENST00000488058 M0R2C6 588 aa28.46■■■□□ 2.15
RNF38-208ENST00000488058 GPAA1O43292 621 aa28.46■■■□□ 2.15
RNF38-208ENST00000488058 SEPT2Q15019 361 aa28.46■■■□□ 2.15
RNF38-208ENST00000488058 CTR9Q6PD62 1173 aa28.46■■■□□ 2.15
RNF38-208ENST00000488058 HOXD10P28358 340 aa28.45■■■□□ 2.14
RNF38-208ENST00000488058 PDE1AP54750 535 aa28.45■■■□□ 2.14
RNF38-208ENST00000488058 SLC9C1Q4G0N8 1177 aa28.45■■■□□ 2.14
RNF38-208ENST00000488058 SMC5Q8IY18 1101 aa28.45■■■□□ 2.14
RNF38-208ENST00000488058 ACER1Q8TDN7 264 aa28.45■■■□□ 2.14
RNF38-208ENST00000488058 EMILIN3Q9NT22 766 aa28.45■■■□□ 2.14
RNF38-208ENST00000488058 ARPP21Q9UBL0 812 aaPredicted RBP28.45■■■□□ 2.14
RNF38-208ENST00000488058 GUCY1A2P33402 732 aa28.44■■■□□ 2.14
RNF38-208ENST00000488058 RGS19P49795 217 aa28.44■■■□□ 2.14
RNF38-208ENST00000488058 PRMT2P55345 433 aa28.44■■■□□ 2.14
RNF38-208ENST00000488058 MLLT1Q03111 559 aaPredicted RBP28.44■■■□□ 2.14
RNF38-208ENST00000488058 SEC62Q99442 399 aaKnown RBP28.44■■■□□ 2.14
RNF38-208ENST00000488058 STAP2Q9UGK3 403 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms