RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 C9orf84Q5VXU9 1444 aa4.61□□□□□ -1.67
GPNMB-212ENST00000487890 SLC22A31A6NKX4 558 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 MEIS3P2A8K0S8 358 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 GSTM4Q03013 218 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 AP3B2Q13367 1082 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 LRRFIP1Q32MZ4 808 aaKnown RBP4.6□□□□□ -1.67
GPNMB-212ENST00000487890 WIPI1Q5MNZ9 446 aaPredicted RBP4.6□□□□□ -1.67
GPNMB-212ENST00000487890 GDF6Q6KF10 455 aaPredicted RBP4.6□□□□□ -1.67
GPNMB-212ENST00000487890 LRFN4Q6PJG9 635 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 UNC5AQ6ZN44 842 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 AFAP1Q8N556 730 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 ST13P5Q8NFI4 369 aaPredicted RBP4.6□□□□□ -1.67
GPNMB-212ENST00000487890 DDX54Q8TDD1 881 aaKnown RBP4.6□□□□□ -1.67
GPNMB-212ENST00000487890 TMEM40Q8WWA1 233 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 ATG4CQ96DT6 458 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 PLPPR2Q96GM1 343 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 TRERF1Q96PN7 1200 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 IRF2BPLQ9H1B7 796 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 CCDC86Q9H6F5 360 aaKnown RBP4.6□□□□□ -1.67
GPNMB-212ENST00000487890 REV1Q9UBZ9 1251 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 PCDHB10Q9UN67 800 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 CD2APQ9Y5K6 639 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 CEP162Q5TB80 1403 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 ATP10AO60312 1499 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 MAGI2Q86UL8 1455 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 ABCC1P33527 1531 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 ABCA6Q8N139 1617 aa4.6□□□□□ -1.67
GPNMB-212ENST00000487890 SUPT6HQ7KZ85 1726 aaKnown RBP4.6□□□□□ -1.67
GPNMB-212ENST00000487890 FAM86C2PA6NEL3 165 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 ADARB2-AS1A8MUL3 147 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 ADCY3O60266 1144 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 ZNF862O60290 1169 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 CTSBP07858 339 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 VIL1P09327 827 aaKnown RBP4.59□□□□□ -1.67
GPNMB-212ENST00000487890 BMP4P12644 408 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 NME1P15531 152 aaKnown RBP4.59□□□□□ -1.67
GPNMB-212ENST00000487890 ADH7P40394 386 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 KDM5CP41229 1560 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 TCEA2Q15560 299 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 OVOS1Q6IE37 1185 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 PSAPL1Q6NUJ1 521 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 FOXR1Q6PIV2 292 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 CCNB3Q8WWL7 1395 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 SLC7A3Q8WY07 619 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 TTC9Q92623 222 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 SLC9A7Q96T83 725 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 MDFIQ99750 246 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 SPATA9Q9BWV2 254 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 SYCP2Q9BX26 1530 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 NRSN2Q9GZP1 204 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 TMX1Q9H3N1 280 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 G3BP2Q9UN86 482 aaKnown RBP4.59□□□□□ -1.67
GPNMB-212ENST00000487890 DIP2CQ9Y2E4 1556 aa4.59□□□□□ -1.67
GPNMB-212ENST00000487890 CFAP65Q6ZU64 1925 aaKnown RBP4.58□□□□□ -1.68
GPNMB-212ENST00000487890 KIDINS220Q9ULH0 1771 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 SAMD9LQ8IVG5 1584 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 EHBP1L1Q8N3D4 1523 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 TRAPPC8Q9Y2L5 1435 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 SPAG9O60271 1321 aaKnown RBP4.58□□□□□ -1.68
GPNMB-212ENST00000487890 CDC14CA4D256 554 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 CHURC1-FNTBB4DL54 471 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 H3BRJ5 948 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 GFRA3O60609 400 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 PDGFRBP09619 1106 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 PLCG1P19174 1290 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 HSPA2P54652 639 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 CABP4P57796 275 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 EVA1CP58658 441 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 GRIK5Q16478 980 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 INTS3Q68E01 1043 aaKnown RBP4.58□□□□□ -1.68
GPNMB-212ENST00000487890 TXNDC11Q6PKC3 985 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 VHLLQ6RSH7 139 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 CYFIP1Q7L576 1253 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 KRT26Q7Z3Y9 468 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 JAMLQ86YT9 394 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 TAB3Q8N5C8 712 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-212ENST00000487890 ZNF669Q96BR6 464 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-212ENST00000487890 WDR89Q96FK6 387 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-212ENST00000487890 ACSBG1Q96GR2 724 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 POLR3GLQ9BT43 218 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 FAM126AQ9BYI3 521 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-212ENST00000487890 SOX17Q9H6I2 414 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-212ENST00000487890 FRRS1LQ9P0K9 344 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 GMIPQ9P107 970 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 CHPF2Q9P2E5 772 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 CFDP1Q9UEE9 299 aaPredicted RBP4.58□□□□□ -1.68
GPNMB-212ENST00000487890 SNCAIPQ9Y6H5 919 aa4.58□□□□□ -1.68
GPNMB-212ENST00000487890 PREX1Q8TCU6 1659 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 FAM177BA6PVY3 158 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 NEURL1BA8MQ27 555 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 DCDC2CA8MYV0 355 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 LINC01387J3KSC0 135 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 PPFIA3O75145 1194 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 RGS9O75916 674 aaPredicted RBP4.57□□□□□ -1.68
GPNMB-212ENST00000487890 ARAFP10398 606 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 LIG1P18858 919 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 POU3F3P20264 500 aaPredicted RBP4.57□□□□□ -1.68
GPNMB-212ENST00000487890 MAOBP27338 520 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 BAG6P46379 1132 aa4.57□□□□□ -1.68
GPNMB-212ENST00000487890 CEBPAP49715 358 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms