RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 PROCA1Q8NCQ7 364 aaPredicted RBP7.46□□□□□ -1.22
COL4A3-206ENST00000487633 KLHDC4Q8TBB5 520 aa7.46□□□□□ -1.22
COL4A3-206ENST00000487633 HOOK2Q96ED9 719 aa7.46□□□□□ -1.22
COL4A3-206ENST00000487633 FBXL18Q96ME1 805 aa7.46□□□□□ -1.22
COL4A3-206ENST00000487633 ZFHX4Q86UP3 3567 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 CTNND1O60716 968 aaKnown RBP7.45□□□□□ -1.22
COL4A3-206ENST00000487633 ARHGEF15O94989 841 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 RGS2P41220 211 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 RABGGTBP53611 331 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 HERVK_113P62684 666 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 ERVK-9P63128 1117 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 ERVK-24P63145 666 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 IRX5P78411 483 aaPredicted RBP7.45□□□□□ -1.22
COL4A3-206ENST00000487633 NEXNQ0ZGT2 675 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 PICALMQ13492 652 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 SH3D19Q5HYK7 790 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 FAM47AQ5JRC9 791 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 TMEM240Q5SV17 173 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 RASIP1Q5U651 963 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 SPRED2Q7Z698 418 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 TSR2Q969E8 191 aaKnown RBP7.45□□□□□ -1.22
COL4A3-206ENST00000487633 LENG1Q96BZ8 264 aaPredicted RBP7.45□□□□□ -1.22
COL4A3-206ENST00000487633 APBA2Q99767 749 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 PAGR1Q9BTK6 254 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 LRRFIP2Q9Y608 721 aaKnown RBP7.45□□□□□ -1.22
COL4A3-206ENST00000487633 C5orf42Q9H799 3197 aa7.45□□□□□ -1.22
COL4A3-206ENST00000487633 PTPRSQ13332 1948 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 COL4A4P53420 1690 aaPredicted RBP7.44□□□□□ -1.22
COL4A3-206ENST00000487633 PI4K2BG5E9Z4 385 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 KIAA0355O15063 1070 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 PQBP1O60828 265 aaKnown RBP7.44□□□□□ -1.22
COL4A3-206ENST00000487633 CLTBP09497 229 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 FPGSQ05932 587 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 FAAP100Q0VG06 881 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 MAP2K5Q13163 448 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 MTMR2Q13614 643 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 LRRC41Q15345 812 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 CCDC30Q5VVM6 783 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 CCDC129Q6ZRS4 1044 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 PLEKHH3Q7Z736 793 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 ZNF280CQ8ND82 737 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 GPRC5AQ8NFJ5 357 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 ZNF384Q8TF68 577 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 TBC1D22AQ8WUA7 517 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 SOCS4Q8WXH5 440 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 SUCLG2Q96I99 432 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 PNMA3Q9UL41 463 aa7.44□□□□□ -1.22
COL4A3-206ENST00000487633 TRIOO75962 3097 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 FRAT2O75474 233 aaPredicted RBP7.43□□□□□ -1.22
COL4A3-206ENST00000487633 RGS20O76081 388 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 SLC4A2P04920 1241 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 RAG1P15918 1043 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 FGFR2P21802 821 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 CCDC57Q2TAC2 916 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 BEND3Q5T5X7 828 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 VPS37DQ86XT2 251 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 IL27Q8NEV9 243 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 LINS1Q8NG48 757 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 DNAAF4Q8WXU2 420 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 VWCEQ96DN2 955 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 EDC3Q96F86 508 aaKnown RBP7.43□□□□□ -1.22
COL4A3-206ENST00000487633 IDI2Q9BXS1 227 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 PNNQ9H307 717 aaKnown RBP7.43□□□□□ -1.22
COL4A3-206ENST00000487633 CERS4Q9HA82 394 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 SCN5AQ14524 2016 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 UTYO14607 1347 aa7.43□□□□□ -1.22
COL4A3-206ENST00000487633 ERC2O15083 957 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 ENTPD3O75355 529 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 CSF2RAP15509 400 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 HOXA7P31268 230 aaPredicted RBP7.42□□□□□ -1.22
COL4A3-206ENST00000487633 FLIIQ13045 1269 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 TAF7LQ5H9L4 462 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 C1orf53Q5VUE5 145 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 ZNF365Q70YC5 407 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 ZSCAN29Q8IWY8 852 aaPredicted RBP7.42□□□□□ -1.22
COL4A3-206ENST00000487633 RUNDC1Q96C34 613 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 DNAJC18Q9H819 358 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 IFT57Q9NWB7 429 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 BTBD7Q9P203 1132 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 ADAMTS8Q9UP79 889 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 MTCH2Q9Y6C9 303 aa7.42□□□□□ -1.22
COL4A3-206ENST00000487633 MYO5AQ9Y4I1 1855 aaKnown RBP7.42□□□□□ -1.22
COL4A3-206ENST00000487633 PLXNA3P51805 1871 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 CACNA1FO60840 1977 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 PRR33A8MZF0 331 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 COBLO75128 1261 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 PDE8BO95263 885 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 PGK1P00558 417 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 TAL1P17542 331 aaPredicted RBP7.41□□□□□ -1.22
COL4A3-206ENST00000487633 PTPREP23469 700 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 MAPK4P31152 587 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 CAP2P40123 477 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 RHBDL3P58872 404 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 IRX3P78415 501 aaPredicted RBP7.41□□□□□ -1.22
COL4A3-206ENST00000487633 SKIV2LQ15477 1246 aaKnown RBP7.41□□□□□ -1.22
COL4A3-206ENST00000487633 UIMC1Q96RL1 719 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.41□□□□□ -1.22
COL4A3-206ENST00000487633 EMILIN3Q9NT22 766 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 TMEM39AQ9NV64 488 aa7.41□□□□□ -1.22
COL4A3-206ENST00000487633 TACC3Q9Y6A5 838 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms