RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 ANKRD45Q5TZF3 282 aa24.64■■□□□ 1.54
HDAC4-209ENST00000487617 TATDN1Q6P1N9 297 aa24.64■■□□□ 1.54
HDAC4-209ENST00000487617 KBTBD3Q8NAB2 608 aa24.64■■□□□ 1.54
HDAC4-209ENST00000487617 OTUD7AQ8TE49 926 aaPredicted RBP24.64■■□□□ 1.54
HDAC4-209ENST00000487617 GCC1Q96CN9 775 aa24.64■■□□□ 1.54
HDAC4-209ENST00000487617 ARHGAP39Q9C0H5 1083 aa24.64■■□□□ 1.54
HDAC4-209ENST00000487617 MYH1P12882 1939 aa24.63■■□□□ 1.53
HDAC4-209ENST00000487617 GH2P01242 217 aa24.63■■□□□ 1.53
HDAC4-209ENST00000487617 SOX10P56693 466 aa24.63■■□□□ 1.53
HDAC4-209ENST00000487617 ATP8A2Q9NTI2 1148 aa24.63■■□□□ 1.53
HDAC4-209ENST00000487617 BACE1P56817 501 aa24.62■■□□□ 1.53
HDAC4-209ENST00000487617 MTMR2Q13614 643 aa24.62■■□□□ 1.53
HDAC4-209ENST00000487617 CERKLQ49MI3 558 aaPredicted RBP24.62■■□□□ 1.53
HDAC4-209ENST00000487617 SH3D19Q5HYK7 790 aa24.62■■□□□ 1.53
HDAC4-209ENST00000487617 SMCR8Q8TEV9 937 aaPredicted RBP24.62■■□□□ 1.53
HDAC4-209ENST00000487617 PUS7LQ9H0K6 701 aaKnown RBP24.62■■□□□ 1.53
HDAC4-209ENST00000487617 ATAD5Q96QE3 1844 aa24.62■■□□□ 1.53
HDAC4-209ENST00000487617 GLRX3O76003 335 aaKnown RBP24.61■■□□□ 1.53
HDAC4-209ENST00000487617 BCRP11274 1271 aa24.61■■□□□ 1.53
HDAC4-209ENST00000487617 MX1P20591 662 aa24.61■■□□□ 1.53
HDAC4-209ENST00000487617 SHMT1P34896 483 aa24.61■■□□□ 1.53
HDAC4-209ENST00000487617 EVX2Q03828 476 aa24.61■■□□□ 1.53
HDAC4-209ENST00000487617 PI4K2BQ8TCG2 481 aa24.61■■□□□ 1.53
HDAC4-209ENST00000487617 TMOD4Q9NZQ9 345 aa24.61■■□□□ 1.53
HDAC4-209ENST00000487617 PNMA3Q9UL41 463 aa24.61■■□□□ 1.53
HDAC4-209ENST00000487617 SLC4A4Q9Y6R1 1079 aa24.61■■□□□ 1.53
HDAC4-209ENST00000487617 CYP2D6P10635 497 aa24.6■■□□□ 1.53
HDAC4-209ENST00000487617 PSMC4P43686 418 aa24.6■■□□□ 1.53
HDAC4-209ENST00000487617 RGS19P49795 217 aa24.6■■□□□ 1.53
HDAC4-209ENST00000487617 GABPAQ06546 454 aa24.6■■□□□ 1.53
HDAC4-209ENST00000487617 PABPC4Q13310 644 aaKnown RBP eCLIP24.6■■□□□ 1.53
HDAC4-209ENST00000487617 ABCB5Q2M3G0 1257 aa24.6■■□□□ 1.53
HDAC4-209ENST00000487617 EXOC6Q8TAG9 804 aa24.6■■□□□ 1.53
HDAC4-209ENST00000487617 DDRGK1Q96HY6 314 aa24.6■■□□□ 1.53
HDAC4-209ENST00000487617 CABP5Q9NP86 173 aa24.6■■□□□ 1.53
HDAC4-209ENST00000487617 SUPT16HQ9Y5B9 1047 aaKnown RBP24.6■■□□□ 1.53
HDAC4-209ENST00000487617 PTPRFP10586 1907 aa24.59■■□□□ 1.53
HDAC4-209ENST00000487617 C19orf81C9J6K1 198 aa24.59■■□□□ 1.53
HDAC4-209ENST00000487617 USP17L10C9JJH3 530 aa24.59■■□□□ 1.53
HDAC4-209ENST00000487617 RNF113AO15541 343 aaKnown RBP24.59■■□□□ 1.53
HDAC4-209ENST00000487617 GNRH1P01148 92 aa24.59■■□□□ 1.53
HDAC4-209ENST00000487617 RAB3GAP1Q15042 981 aa24.59■■□□□ 1.53
HDAC4-209ENST00000487617 PTCH2Q9Y6C5 1203 aa24.59■■□□□ 1.53
HDAC4-209ENST00000487617 NAV1Q8NEY1 1877 aa24.59■■□□□ 1.53
HDAC4-209ENST00000487617 DDX60LQ5H9U9 1706 aaKnown RBP24.58■■□□□ 1.53
HDAC4-209ENST00000487617 FMNL1O95466 1100 aaPredicted RBP24.58■■□□□ 1.53
HDAC4-209ENST00000487617 ZFYP08048 801 aaPredicted RBP24.58■■□□□ 1.53
HDAC4-209ENST00000487617 OSBPP22059 807 aa24.58■■□□□ 1.53
HDAC4-209ENST00000487617 CTGFP29279 349 aa24.58■■□□□ 1.53
HDAC4-209ENST00000487617 AMOTL1Q8IY63 956 aa24.58■■□□□ 1.53
HDAC4-209ENST00000487617 APPBP2Q92624 585 aa24.58■■□□□ 1.53
HDAC4-209ENST00000487617 TRIM47Q96LD4 638 aa24.58■■□□□ 1.53
HDAC4-209ENST00000487617 LRRFIP1Q32MZ4 808 aaKnown RBP24.57■■□□□ 1.52
HDAC4-209ENST00000487617 OSBP2Q969R2 916 aa24.57■■□□□ 1.52
HDAC4-209ENST00000487617 RWDD1Q9H446 243 aaPredicted RBP24.57■■□□□ 1.52
HDAC4-209ENST00000487617 USP17L12C9JPN9 530 aa24.56■■□□□ 1.52
HDAC4-209ENST00000487617 USP17L21D6R901 530 aa24.56■■□□□ 1.52
HDAC4-209ENST00000487617 HOXD10P28358 340 aa24.56■■□□□ 1.52
HDAC4-209ENST00000487617 FCGRTP55899 365 aa24.56■■□□□ 1.52
HDAC4-209ENST00000487617 SLC44A5Q8NCS7 719 aa24.56■■□□□ 1.52
HDAC4-209ENST00000487617 DYNLL2Q96FJ2 89 aa24.56■■□□□ 1.52
HDAC4-209ENST00000487617 STRBPQ96SI9 672 aaKnown RBP24.56■■□□□ 1.52
HDAC4-209ENST00000487617 FEZ1Q99689 392 aa24.56■■□□□ 1.52
HDAC4-209ENST00000487617 ASCC2Q9H1I8 757 aaPredicted RBP24.56■■□□□ 1.52
HDAC4-209ENST00000487617 SWAP70Q9UH65 585 aa24.56■■□□□ 1.52
HDAC4-209ENST00000487617 SALL3Q9BXA9 1300 aa24.56■■□□□ 1.52
HDAC4-209ENST00000487617 CYP2D7A0A087X1C5 515 aa24.55■■□□□ 1.52
HDAC4-209ENST00000487617 MPHOSPH10O00566 681 aaKnown RBP24.55■■□□□ 1.52
HDAC4-209ENST00000487617 PRMT2P55345 433 aa24.55■■□□□ 1.52
HDAC4-209ENST00000487617 IRX3P78415 501 aaPredicted RBP24.55■■□□□ 1.52
HDAC4-209ENST00000487617 MLLT1Q03111 559 aaPredicted RBP24.55■■□□□ 1.52
HDAC4-209ENST00000487617 C12orf60Q5U649 245 aa24.55■■□□□ 1.52
HDAC4-209ENST00000487617 USP17L2Q6R6M4 530 aa24.55■■□□□ 1.52
HDAC4-209ENST00000487617 ANKRD13CQ8N6S4 541 aa24.55■■□□□ 1.52
HDAC4-209ENST00000487617 ARMC5Q96C12 935 aa24.55■■□□□ 1.52
HDAC4-209ENST00000487617 FSD1Q9BTV5 496 aa24.55■■□□□ 1.52
HDAC4-209ENST00000487617 MYH7P12883 1935 aa24.55■■□□□ 1.52
HDAC4-209ENST00000487617 LOC285556D6RIA3 1793 aa24.54■■□□□ 1.52
HDAC4-209ENST00000487617 GCLCP48506 637 aaPredicted RBP24.54■■□□□ 1.52
HDAC4-209ENST00000487617 SLC9C1Q4G0N8 1177 aa24.54■■□□□ 1.52
HDAC4-209ENST00000487617 EMILIN3Q9NT22 766 aa24.54■■□□□ 1.52
HDAC4-209ENST00000487617 SRRDQ9UH36 339 aa24.54■■□□□ 1.52
HDAC4-209ENST00000487617 TAOK2Q9UL54 1235 aa24.54■■□□□ 1.52
HDAC4-209ENST00000487617 HOXA7P31268 230 aaPredicted RBP24.53■■□□□ 1.52
HDAC4-209ENST00000487617 GUCY1A2P33402 732 aa24.53■■□□□ 1.52
HDAC4-209ENST00000487617 SEPT2Q15019 361 aa24.53■■□□□ 1.52
HDAC4-209ENST00000487617 ZYXQ15942 572 aaKnown RBP24.53■■□□□ 1.52
HDAC4-209ENST00000487617 ZSWIM8A7E2V4 1837 aa24.53■■□□□ 1.52
HDAC4-209ENST00000487617 SMIM22K7EJ46 135 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 GPAA1O43292 621 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 PDE1AP54750 535 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 FAM110CQ1W6H9 321 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 B4GALNT3Q6L9W6 998 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 CTR9Q6PD62 1173 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 NBPF11Q86T75 865 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 SMC5Q8IY18 1101 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 ACER1Q8TDN7 264 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 LNPKQ9C0E8 428 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 KIAA1683Q9H0B3 1180 aa24.52■■□□□ 1.52
HDAC4-209ENST00000487617 STAP2Q9UGK3 403 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 214.2 ms