RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 STK24Q9Y6E0 443 aa16.39■□□□□ 0.21
EPHB4-206ENST00000487222 RIMBP2O15034 1052 aa16.39■□□□□ 0.21
EPHB4-206ENST00000487222 GIGYF1O75420 1035 aaPredicted RBP16.39■□□□□ 0.21
EPHB4-206ENST00000487222 CTDSPL2Q05D32 466 aa16.39■□□□□ 0.21
EPHB4-206ENST00000487222 WDR44Q5JSH3 913 aa16.39■□□□□ 0.21
EPHB4-206ENST00000487222 SNX29Q8TEQ0 813 aa16.39■□□□□ 0.21
EPHB4-206ENST00000487222 BCL2L12Q9HB09 334 aa16.39■□□□□ 0.21
EPHB4-206ENST00000487222 BACH1O14867 736 aa16.39■□□□□ 0.21
EPHB4-206ENST00000487222 DNAJC10Q8IXB1 793 aa16.39■□□□□ 0.21
EPHB4-206ENST00000487222 SPATA5Q8NB90 893 aa16.39■□□□□ 0.21
EPHB4-206ENST00000487222 RPGRIP1Q96KN7 1286 aa16.39■□□□□ 0.21
EPHB4-206ENST00000487222 SEC62Q99442 399 aaKnown RBP16.39■□□□□ 0.21
EPHB4-206ENST00000487222 NCBP1Q09161 790 aaKnown RBP16.38■□□□□ 0.21
EPHB4-206ENST00000487222 PAK2Q13177 524 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 GBP6Q6ZN66 633 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 UBL4BQ8N7F7 174 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 RBM17Q96I25 401 aaKnown RBP16.38■□□□□ 0.21
EPHB4-206ENST00000487222 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-206ENST00000487222 PALD1Q9ULE6 856 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 HERC4Q5GLZ8 1057 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-206ENST00000487222 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 TRMT44Q8IYL2 757 aaKnown RBP16.38■□□□□ 0.21
EPHB4-206ENST00000487222 WDR66Q8TBY9 1149 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 FNBP1Q96RU3 617 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 ERCC5P28715 1186 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-206ENST00000487222 PPFIA1Q13136 1202 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 MROH5Q6ZUA9 1318 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 ARHGEF5Q12774 1597 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 NEURL1BA8MQ27 555 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 PFKFB1P16118 471 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 RNASE9P60153 205 aaKnown RBP16.38■□□□□ 0.21
EPHB4-206ENST00000487222 BIRC3Q13489 604 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 DPH6Q7L8W6 267 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 RSRC1Q96IZ7 334 aaKnown RBP16.38■□□□□ 0.21
EPHB4-206ENST00000487222 TRIM7Q9C029 511 aa16.38■□□□□ 0.21
EPHB4-206ENST00000487222 NUCKS1Q9H1E3 243 aaKnown RBP16.38■□□□□ 0.21
EPHB4-206ENST00000487222 PTH1RQ03431 593 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 USP28Q96RU2 1077 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 PSMD1Q99460 953 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 CCDC87Q9NVE4 849 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 SERTAD1Q9UHV2 236 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 PFKFB2O60825 505 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 INPP5BP32019 993 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 SMTNP53814 917 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 CFAP221Q4G0U5 840 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 NR1I2O75469 434 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 KRT5P13647 590 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 PNOCQ13519 176 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 BEND3Q5T5X7 828 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 FCHSD1Q86WN1 690 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 PPFIBP2Q8ND30 876 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 JDP2Q8WYK2 163 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 MRFAP1L1Q96HT8 127 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 MAGI3Q5TCQ9 1506 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 CEP104O60308 925 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 OAS2P29728 719 aaKnown RBP16.37■□□□□ 0.21
EPHB4-206ENST00000487222 ADCY7P51828 1080 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 ZNF365Q70YC5 407 aa16.37■□□□□ 0.21
EPHB4-206ENST00000487222 RGS12O14924 1447 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 SPATA31E1Q6ZUB1 1445 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 FLOT1O75955 427 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 TPCN1Q9ULQ1 816 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 FAM169AQ9Y6X4 670 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 A0A0D9SFI3 127 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 STX10O60499 249 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 KLHL30Q0D2K2 578 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 BRD3Q15059 726 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 EAF2Q96CJ1 260 aaPredicted RBP16.36■□□□□ 0.21
EPHB4-206ENST00000487222 UFL1O94874 794 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 ARID4AP29374 1257 aaPredicted RBP16.36■□□□□ 0.21
EPHB4-206ENST00000487222 LTKP29376 864 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 LONRF3Q496Y0 759 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 CCDC14Q49A88 953 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 CABP7Q86V35 215 aa16.36■□□□□ 0.21
EPHB4-206ENST00000487222 EDC3Q96F86 508 aaKnown RBP16.36■□□□□ 0.21
EPHB4-206ENST00000487222 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.21
EPHB4-206ENST00000487222 TAF5LO75529 589 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 ZNF354CQ86Y25 554 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.35■□□□□ 0.212e-7■■■■□ 24.5
EPHB4-206ENST00000487222 VPS54Q9P1Q0 977 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 ERVV-2B6SEH9 535 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 CMA1P23946 247 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 CLUL1Q15846 466 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 SND1Q7KZF4 910 aaKnown RBP eCLIP16.35■□□□□ 0.21
EPHB4-206ENST00000487222 GPT2Q8TD30 523 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 MAK16Q9BXY0 300 aaKnown RBP16.35■□□□□ 0.21
EPHB4-206ENST00000487222 PKP1Q13835 747 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 RPS6KA1Q15418 735 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 SYCE1Q8N0S2 351 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 IL17REQ8NFR9 667 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 OR8K1Q8NGG5 319 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 STAMQ92783 540 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 EXOC7Q9UPT5 735 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 ARL1P40616 181 aaPredicted RBP16.35■□□□□ 0.21
EPHB4-206ENST00000487222 WHAMMP3Q1A5X7 153 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 DYMQ7RTS9 669 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 NOSTRINQ8IVI9 506 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
EPHB4-206ENST00000487222 SAR1BQ9Y6B6 198 aa16.35■□□□□ 0.21
EPHB4-206ENST00000487222 GCC2Q8IWJ2 1684 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms