RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 OGDHLQ9ULD0 1010 aa23.89■■□□□ 1.41
SMPDL3A-202ENST00000487215 DDX60LQ5H9U9 1706 aaKnown RBP23.89■■□□□ 1.41
SMPDL3A-202ENST00000487215 LAMA3Q16787 3333 aa23.88■■□□□ 1.41
SMPDL3A-202ENST00000487215 HERVK_113P62684 666 aa23.88■■□□□ 1.41
SMPDL3A-202ENST00000487215 TTC39AQ5SRH9 613 aa23.88■■□□□ 1.41
SMPDL3A-202ENST00000487215 METTL16Q86W50 562 aaKnown RBP23.88■■□□□ 1.41
SMPDL3A-202ENST00000487215 GPRC5AQ8NFJ5 357 aa23.88■■□□□ 1.41
SMPDL3A-202ENST00000487215 C19orf81C9J6K1 198 aa23.87■■□□□ 1.41
SMPDL3A-202ENST00000487215 IPO8O15397 1037 aaKnown RBP23.87■■□□□ 1.41
SMPDL3A-202ENST00000487215 GDF11O95390 407 aa23.87■■□□□ 1.41
SMPDL3A-202ENST00000487215 PRKAR2AP13861 404 aaKnown RBP23.87■■□□□ 1.41
SMPDL3A-202ENST00000487215 ATF7IPQ6VMQ6 1270 aa23.87■■□□□ 1.41
SMPDL3A-202ENST00000487215 FOXP4Q8IVH2 680 aaPredicted RBP23.87■■□□□ 1.41
SMPDL3A-202ENST00000487215 CRACR2BQ8N4Y2 399 aaPredicted RBP23.87■■□□□ 1.41
SMPDL3A-202ENST00000487215 SOCS4Q8WXH5 440 aa23.87■■□□□ 1.41
SMPDL3A-202ENST00000487215 NUDT12Q9BQG2 462 aa23.87■■□□□ 1.41
SMPDL3A-202ENST00000487215 DBNDD2Q9BQY9 259 aa23.87■■□□□ 1.41
SMPDL3A-202ENST00000487215 USP17L10C9JJH3 530 aa23.86■■□□□ 1.41
SMPDL3A-202ENST00000487215 XRCC5P13010 732 aaKnown RBP23.86■■□□□ 1.41
SMPDL3A-202ENST00000487215 TNNI3KQ59H18 835 aa23.86■■□□□ 1.41
SMPDL3A-202ENST00000487215 SLC17A8Q8NDX2 589 aa23.86■■□□□ 1.41
SMPDL3A-202ENST00000487215 TRIM34Q9BYJ4 488 aa23.86■■□□□ 1.41
SMPDL3A-202ENST00000487215 GPR108Q9NPR9 543 aa23.86■■□□□ 1.41
SMPDL3A-202ENST00000487215 RBPJLQ9UBG7 517 aa23.86■■□□□ 1.41
SMPDL3A-202ENST00000487215 PALD1Q9ULE6 856 aa23.86■■□□□ 1.41
SMPDL3A-202ENST00000487215 ZBTB21Q9ULJ3 1066 aa23.86■■□□□ 1.41
SMPDL3A-202ENST00000487215 FPGT-TNNI3KV9GXZ4 949 aa23.86■■□□□ 1.41
SMPDL3A-202ENST00000487215 CYP2E1P05181 493 aaPredicted RBP23.85■■□□□ 1.41
SMPDL3A-202ENST00000487215 SYN1P17600 705 aa23.85■■□□□ 1.41
SMPDL3A-202ENST00000487215 CCDC158Q5M9N0 1113 aa23.85■■□□□ 1.41
SMPDL3A-202ENST00000487215 FRAT1Q92837 279 aaPredicted RBP23.85■■□□□ 1.41
SMPDL3A-202ENST00000487215 CLUAP1Q96AJ1 413 aa23.85■■□□□ 1.41
SMPDL3A-202ENST00000487215 GINM1Q9NU53 330 aa23.85■■□□□ 1.41
SMPDL3A-202ENST00000487215 FOCADQ5VW36 1801 aa23.84■■□□□ 1.41
SMPDL3A-202ENST00000487215 CDK5RAP2Q96SN8 1893 aa23.84■■□□□ 1.41
SMPDL3A-202ENST00000487215 MAPK4P31152 587 aa23.84■■□□□ 1.41
SMPDL3A-202ENST00000487215 POLA2Q14181 598 aa23.84■■□□□ 1.41
SMPDL3A-202ENST00000487215 PDE3AQ14432 1141 aa23.84■■□□□ 1.41
SMPDL3A-202ENST00000487215 Q3C1V9 767 aa23.84■■□□□ 1.41
SMPDL3A-202ENST00000487215 SAP30BPQ9UHR5 308 aaKnown RBP23.84■■□□□ 1.41
SMPDL3A-202ENST00000487215 PFASO15067 1338 aa23.84■■□□□ 1.41
SMPDL3A-202ENST00000487215 BCAR3O75815 825 aa23.83■■□□□ 1.41
SMPDL3A-202ENST00000487215 ZKSCAN1P17029 563 aaPredicted RBP23.83■■□□□ 1.41
SMPDL3A-202ENST00000487215 MAGEA10P43363 369 aaPredicted RBP23.83■■□□□ 1.41
SMPDL3A-202ENST00000487215 ERVK-9P63128 1117 aa23.83■■□□□ 1.41
SMPDL3A-202ENST00000487215 ERVK-24P63145 666 aa23.83■■□□□ 1.41
SMPDL3A-202ENST00000487215 USP6NLQ92738 828 aa23.83■■□□□ 1.41
SMPDL3A-202ENST00000487215 PORCNQ9H237 461 aa23.83■■□□□ 1.41
SMPDL3A-202ENST00000487215 EMILIN3Q9NT22 766 aa23.83■■□□□ 1.41
SMPDL3A-202ENST00000487215 ZAP70P43403 619 aa23.82■■□□□ 1.4
SMPDL3A-202ENST00000487215 DYNLL1P63167 89 aaKnown RBP23.82■■□□□ 1.4
SMPDL3A-202ENST00000487215 CACNB2Q08289 660 aaPredicted RBP23.82■■□□□ 1.4
SMPDL3A-202ENST00000487215 POTEEQ6S8J3 1075 aa23.82■■□□□ 1.4
SMPDL3A-202ENST00000487215 GPR142Q7Z601 462 aa23.82■■□□□ 1.4
SMPDL3A-202ENST00000487215 TRMT44Q8IYL2 757 aaKnown RBP23.82■■□□□ 1.4
SMPDL3A-202ENST00000487215 GTF3C2Q8WUA4 911 aaPredicted RBP23.82■■□□□ 1.4
SMPDL3A-202ENST00000487215 ZNF512BQ96KM6 892 aaPredicted RBP23.82■■□□□ 1.4
SMPDL3A-202ENST00000487215 PAGR1Q9BTK6 254 aa23.82■■□□□ 1.4
SMPDL3A-202ENST00000487215 PIH1D3Q9NQM4 214 aaKnown RBP23.82■■□□□ 1.4
SMPDL3A-202ENST00000487215 HLA-DOAP06340 250 aa23.81■■□□□ 1.4
SMPDL3A-202ENST00000487215 OS9Q13438 667 aaPredicted RBP23.81■■□□□ 1.4
SMPDL3A-202ENST00000487215 CCL14Q16627 93 aa23.81■■□□□ 1.4
SMPDL3A-202ENST00000487215 MORN1Q5T089 497 aa23.81■■□□□ 1.4
SMPDL3A-202ENST00000487215 TMEM57Q8N5G2 664 aa23.81■■□□□ 1.4
SMPDL3A-202ENST00000487215 DLL1O00548 723 aa23.8■■□□□ 1.4
SMPDL3A-202ENST00000487215 IGSF3O75054 1194 aa23.8■■□□□ 1.4
SMPDL3A-202ENST00000487215 COL6A1P12109 1028 aa23.8■■□□□ 1.4
SMPDL3A-202ENST00000487215 RGS2P41220 211 aa23.8■■□□□ 1.4
SMPDL3A-202ENST00000487215 GPR153Q6NV75 609 aa23.8■■□□□ 1.4
SMPDL3A-202ENST00000487215 USP17L2Q6R6M4 530 aa23.8■■□□□ 1.4
SMPDL3A-202ENST00000487215 PLEKHH3Q7Z736 793 aa23.8■■□□□ 1.4
SMPDL3A-202ENST00000487215 CCAR1Q8IX12 1150 aaKnown RBP23.8■■□□□ 1.4
SMPDL3A-202ENST00000487215 SSH3Q8TE77 659 aa23.8■■□□□ 1.4
SMPDL3A-202ENST00000487215 GH2P01242 217 aa23.79■■□□□ 1.4
SMPDL3A-202ENST00000487215 CCND3P30281 292 aaPredicted RBP23.79■■□□□ 1.4
SMPDL3A-202ENST00000487215 LRIT3Q3SXY7 679 aa23.79■■□□□ 1.4
SMPDL3A-202ENST00000487215 TDHQ8IZJ6 230 aa23.79■■□□□ 1.4
SMPDL3A-202ENST00000487215 APBA2Q99767 749 aa23.79■■□□□ 1.4
SMPDL3A-202ENST00000487215 COL6A3P12111 3177 aa23.79■■□□□ 1.4
SMPDL3A-202ENST00000487215 SURF6O75683 361 aaKnown RBP23.78■■□□□ 1.4
SMPDL3A-202ENST00000487215 CYP7A1P22680 504 aa23.78■■□□□ 1.4
SMPDL3A-202ENST00000487215 ATP8B2P98198 1209 aa23.78■■□□□ 1.4
SMPDL3A-202ENST00000487215 LHX8Q68G74 356 aa23.78■■□□□ 1.4
SMPDL3A-202ENST00000487215 C12orf42Q96LP6 360 aa23.78■■□□□ 1.4
SMPDL3A-202ENST00000487215 TLR7Q9NYK1 1049 aaKnown RBP23.78■■□□□ 1.4
SMPDL3A-202ENST00000487215 DBNLQ9UJU6 430 aaKnown RBP23.78■■□□□ 1.4
SMPDL3A-202ENST00000487215 MYO5AQ9Y4I1 1855 aaKnown RBP23.78■■□□□ 1.4
SMPDL3A-202ENST00000487215 ZYXQ15942 572 aaKnown RBP23.77■■□□□ 1.4
SMPDL3A-202ENST00000487215 TATDN1Q6P1N9 297 aa23.77■■□□□ 1.4
SMPDL3A-202ENST00000487215 Q7L0L9 218 aa23.77■■□□□ 1.4
SMPDL3A-202ENST00000487215 DEFB123Q8N688 67 aa23.77■■□□□ 1.4
SMPDL3A-202ENST00000487215 UBE2OQ9C0C9 1292 aaKnown RBP23.77■■□□□ 1.4
SMPDL3A-202ENST00000487215 CNMDO75829 334 aa23.76■■□□□ 1.39
SMPDL3A-202ENST00000487215 MIGA1Q8NAN2 632 aa23.76■■□□□ 1.39
SMPDL3A-202ENST00000487215 FEZ1Q99689 392 aa23.76■■□□□ 1.39
SMPDL3A-202ENST00000487215 C1orf115Q9H7X2 142 aa23.76■■□□□ 1.39
SMPDL3A-202ENST00000487215 CWC22Q9HCG8 908 aaKnown RBP23.76■■□□□ 1.39
SMPDL3A-202ENST00000487215 RABGAP1Q9Y3P9 1069 aa23.76■■□□□ 1.39
SMPDL3A-202ENST00000487215 USP17L15C9J2P7 530 aa23.75■■□□□ 1.39
SMPDL3A-202ENST00000487215 USP17L13C9JLJ4 530 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms