RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
PFDN4-204ENST00000487129 AS3MTQ9HBK9 375 aa18.47■□□□□ 0.55
PFDN4-204ENST00000487129 PRUNE2Q8WUY3 3088 aa18.47■□□□□ 0.55
PFDN4-204ENST00000487129 MAPK4P31152 587 aa18.46■□□□□ 0.55
PFDN4-204ENST00000487129 TFCP2Q12800 502 aa18.46■□□□□ 0.55
PFDN4-204ENST00000487129 GPR142Q7Z601 462 aa18.46■□□□□ 0.55
PFDN4-204ENST00000487129 TRMT44Q8IYL2 757 aaKnown RBP18.46■□□□□ 0.55
PFDN4-204ENST00000487129 CDH23Q9H251 3354 aa18.45■□□□□ 0.54
PFDN4-204ENST00000487129 ERVK-9P63128 1117 aa18.45■□□□□ 0.54
PFDN4-204ENST00000487129 ERVK-24P63145 666 aa18.45■□□□□ 0.54
PFDN4-204ENST00000487129 MVPQ14764 893 aaKnown RBP18.45■□□□□ 0.54
PFDN4-204ENST00000487129 SH3RF3Q8TEJ3 882 aaPredicted RBP18.45■□□□□ 0.54
PFDN4-204ENST00000487129 FAM161BQ96MY7 647 aa18.45■□□□□ 0.54
PFDN4-204ENST00000487129 MEIS3Q99687 375 aa18.45■□□□□ 0.54
PFDN4-204ENST00000487129 APBA2Q99767 749 aa18.45■□□□□ 0.54
PFDN4-204ENST00000487129 LTBP2Q14767 1821 aa18.44■□□□□ 0.54
PFDN4-204ENST00000487129 ASNSP08243 561 aa18.44■□□□□ 0.54
PFDN4-204ENST00000487129 RGS2P41220 211 aa18.44■□□□□ 0.54
PFDN4-204ENST00000487129 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
PFDN4-204ENST00000487129 TEX11Q8IYF3 940 aa18.44■□□□□ 0.54
PFDN4-204ENST00000487129 FAM9BQ8IZU0 186 aa18.44■□□□□ 0.54
PFDN4-204ENST00000487129 SPATA5Q8NB90 893 aa18.44■□□□□ 0.54
PFDN4-204ENST00000487129 FLRT1Q9NZU1 646 aa18.44■□□□□ 0.54
PFDN4-204ENST00000487129 PI4KBQ9UBF8 816 aa18.44■□□□□ 0.54
PFDN4-204ENST00000487129 C19orf81C9J6K1 198 aa18.43■□□□□ 0.54
PFDN4-204ENST00000487129 CNMDO75829 334 aa18.43■□□□□ 0.54
PFDN4-204ENST00000487129 IGHA2P01877 340 aa18.43■□□□□ 0.54
PFDN4-204ENST00000487129 LDHCP07864 332 aa18.43■□□□□ 0.54
PFDN4-204ENST00000487129 ARID4AP29374 1257 aaPredicted RBP18.43■□□□□ 0.54
PFDN4-204ENST00000487129 GSTO1P78417 241 aa18.43■□□□□ 0.54
PFDN4-204ENST00000487129 PDE3AQ14432 1141 aa18.43■□□□□ 0.54
PFDN4-204ENST00000487129 PLEKHH3Q7Z736 793 aa18.43■□□□□ 0.54
PFDN4-204ENST00000487129 EMILIN3Q9NT22 766 aa18.43■□□□□ 0.54
PFDN4-204ENST00000487129 TMOD4Q9NZQ9 345 aa18.43■□□□□ 0.54
PFDN4-204ENST00000487129 USP17L10C9JJH3 530 aa18.42■□□□□ 0.54
PFDN4-204ENST00000487129 E9PSI1 815 aa18.42■□□□□ 0.54
PFDN4-204ENST00000487129 MCAMP43121 646 aa18.42■□□□□ 0.54
PFDN4-204ENST00000487129 SLFN5Q08AF3 891 aa18.42■□□□□ 0.54
PFDN4-204ENST00000487129 AKAP2Q9Y2D5 859 aa18.42■□□□□ 0.54
PFDN4-204ENST00000487129 GDF11O95390 407 aa18.41■□□□□ 0.54
PFDN4-204ENST00000487129 MAP2K5Q13163 448 aa18.41■□□□□ 0.54
PFDN4-204ENST00000487129 MTX1Q13505 466 aa18.41■□□□□ 0.54
PFDN4-204ENST00000487129 ADGRA1Q86SQ6 560 aa18.41■□□□□ 0.54
PFDN4-204ENST00000487129 DHX36Q9H2U1 1008 aaKnown RBP18.41■□□□□ 0.54
PFDN4-204ENST00000487129 SMC4Q9NTJ3 1288 aa18.41■□□□□ 0.54
PFDN4-204ENST00000487129 RAI14Q9P0K7 980 aa18.41■□□□□ 0.54
PFDN4-204ENST00000487129 ZBTB21Q9ULJ3 1066 aa18.41■□□□□ 0.54
PFDN4-204ENST00000487129 FLT1P17948 1338 aa18.41■□□□□ 0.54
PFDN4-204ENST00000487129 CDK5RAP2Q96SN8 1893 aa18.41■□□□□ 0.54
PFDN4-204ENST00000487129 FOCADQ5VW36 1801 aa18.4■□□□□ 0.54
PFDN4-204ENST00000487129 TTC28Q96AY4 2481 aa18.4■□□□□ 0.54
PFDN4-204ENST00000487129 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
PFDN4-204ENST00000487129 GTF3C2Q8WUA4 911 aaPredicted RBP18.4■□□□□ 0.54
PFDN4-204ENST00000487129 CDX2Q99626 313 aaPredicted RBP18.4■□□□□ 0.54
PFDN4-204ENST00000487129 PAGR1Q9BTK6 254 aa18.4■□□□□ 0.54
PFDN4-204ENST00000487129 SENP6Q9GZR1 1112 aaPredicted RBP18.4■□□□□ 0.54
PFDN4-204ENST00000487129 ANP32CO43423 234 aa18.39■□□□□ 0.53
PFDN4-204ENST00000487129 PPP4CP60510 307 aa18.39■□□□□ 0.53
PFDN4-204ENST00000487129 ZNF697Q5TEC3 545 aa18.39■□□□□ 0.53
PFDN4-204ENST00000487129 TRPV1Q8NER1 839 aa18.39■□□□□ 0.53
PFDN4-204ENST00000487129 C12orf42Q96LP6 360 aa18.39■□□□□ 0.53
PFDN4-204ENST00000487129 GINM1Q9NU53 330 aa18.39■□□□□ 0.53
PFDN4-204ENST00000487129 AATFQ9NY61 560 aaKnown RBP eCLIP18.39■□□□□ 0.53
PFDN4-204ENST00000487129 DDX20Q9UHI6 824 aaKnown RBP18.39■□□□□ 0.53
PFDN4-204ENST00000487129 NOB1Q9ULX3 412 aaKnown RBP18.39■□□□□ 0.53
PFDN4-204ENST00000487129 MUC3AQ02505 3323 aa18.38■□□□□ 0.53
PFDN4-204ENST00000487129 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
PFDN4-204ENST00000487129 HOXC6P09630 235 aa18.38■□□□□ 0.53
PFDN4-204ENST00000487129 ATN1P54259 1190 aaPredicted RBP18.38■□□□□ 0.53
PFDN4-204ENST00000487129 FOXP4Q8IVH2 680 aaPredicted RBP18.38■□□□□ 0.53
PFDN4-204ENST00000487129 MAPKAPK5Q8IW41 473 aa18.38■□□□□ 0.53
PFDN4-204ENST00000487129 TGFBRAP1Q8WUH2 860 aa18.38■□□□□ 0.53
PFDN4-204ENST00000487129 LPAR1Q92633 364 aa18.38■□□□□ 0.53
PFDN4-204ENST00000487129 EDC3Q96F86 508 aaKnown RBP18.38■□□□□ 0.53
PFDN4-204ENST00000487129 NEUROD6Q96NK8 337 aa18.38■□□□□ 0.53
PFDN4-204ENST00000487129 LBHD1Q9BQE6 289 aaPredicted RBP18.38■□□□□ 0.53
PFDN4-204ENST00000487129 PALD1Q9ULE6 856 aa18.38■□□□□ 0.53
PFDN4-204ENST00000487129 RABGAP1Q9Y3P9 1069 aa18.38■□□□□ 0.53
PFDN4-204ENST00000487129 NDUFB9Q9Y6M9 179 aa18.38■□□□□ 0.53
PFDN4-204ENST00000487129 DNM1LO00429 736 aa18.37■□□□□ 0.53
PFDN4-204ENST00000487129 RTP1P59025 263 aa18.37■□□□□ 0.53
PFDN4-204ENST00000487129 SHHQ15465 462 aa18.37■□□□□ 0.53
PFDN4-204ENST00000487129 C9orf50Q5SZB4 431 aa18.37■□□□□ 0.53
PFDN4-204ENST00000487129 NPLOC4Q8TAT6 608 aa18.37■□□□□ 0.53
PFDN4-204ENST00000487129 CDCA7LQ96GN5 454 aa18.37■□□□□ 0.53
PFDN4-204ENST00000487129 TTYH1Q9H313 450 aaPredicted RBP18.37■□□□□ 0.53
PFDN4-204ENST00000487129 SEMA6BQ9H3T3 888 aa18.37■□□□□ 0.53
PFDN4-204ENST00000487129 RLFQ13129 1914 aa18.37■□□□□ 0.53
PFDN4-204ENST00000487129 SLC15A5A6NIM6 579 aa18.36■□□□□ 0.53
PFDN4-204ENST00000487129 PTPREP23469 700 aa18.36■□□□□ 0.53
PFDN4-204ENST00000487129 GRB14Q14449 540 aa18.36■□□□□ 0.53
PFDN4-204ENST00000487129 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
PFDN4-204ENST00000487129 TRMT2AQ8IZ69 625 aaKnown RBP18.36■□□□□ 0.53
PFDN4-204ENST00000487129 MAFAQ8NHW3 353 aaPredicted RBP18.36■□□□□ 0.53
PFDN4-204ENST00000487129 BTBD7Q9P203 1132 aa18.36■□□□□ 0.53
PFDN4-204ENST00000487129 LRP2BPQ9P2M1 347 aa18.36■□□□□ 0.53
PFDN4-204ENST00000487129 HDAC5Q9UQL6 1122 aa18.36■□□□□ 0.53
PFDN4-204ENST00000487129 GH2P01242 217 aa18.35■□□□□ 0.53
PFDN4-204ENST00000487129 CYBAP13498 195 aa18.35■□□□□ 0.53
PFDN4-204ENST00000487129 CYP2C19P33261 490 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms