RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 CCT2P78371 535 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 GABPAQ06546 454 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 CXCL9Q07325 125 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 CFAP100Q494V2 611 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 TTC6Q86TZ1 520 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 IQCA1Q86XH1 822 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 ENAHQ8N8S7 591 aaPredicted RBP10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 ANKS1AQ92625 1134 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 DYNLL2Q96FJ2 89 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 ZKSCAN3Q9BRR0 538 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 ANP32EQ9BTT0 268 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 OSBPL5Q9H0X9 879 aaPredicted RBP10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 ZNF287Q9HBT7 754 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 NCOA5Q9HCD5 579 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 TCP11L1Q9NUJ3 509 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 TAOK2Q9UL54 1235 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 MTMR6Q9Y217 621 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 PCDHAC2Q9Y5I4 1007 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 BAG4O95429 457 aaKnown RBP10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 ZSCAN22P10073 491 aaPredicted RBP10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 RASA1P20936 1047 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 CDK8P49336 464 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 MMP14P50281 582 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 METAP2P50579 478 aaKnown RBP eCLIP10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 NFIAQ12857 509 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 CCDC178Q5BJE1 867 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 CIAPIN1Q6FI81 312 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 NFXL1Q6ZNB6 911 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 ZNF654Q8IZM8 581 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 MTMR14Q8NCE2 650 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 JDP2Q8WYK2 163 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 EHD4Q9H223 541 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 FAM217BQ9NTX9 383 aaPredicted RBP10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 FAM198AQ9UFP1 575 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 HDAC9Q9UKV0 1011 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 NAP1L2Q9ULW6 460 aaPredicted RBP10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 KIF3AQ9Y496 699 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 SLC12A7Q9Y666 1083 aa10.06□□□□□ -0.8
NUDCD3-209ENST00000487118 ATRNL1Q5VV63 1379 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 PLIN4Q96Q06 1357 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 SPDYE2BA6NHP3 402 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 TSPY2A6NKD2 308 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 GOLGA8AA7E2F4 631 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 DTNBO60941 627 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 ENTPD3O75355 529 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 F13A1P00488 732 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 SPDYE6P0CI01 402 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 CDC27P30260 824 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 NOVP48745 357 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 RBM5P52756 815 aaKnown RBP eCLIP10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 TFAP4Q01664 338 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 PICALMQ13492 652 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 NBR1Q14596 966 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 TNIP1Q15025 636 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 PPP2R5BQ15173 497 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 NTRK3Q16288 839 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 SLC4A8Q2Y0W8 1093 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 FAM47AQ5JRC9 791 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 IFIT1BQ5T764 474 aaKnown RBP10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 LARP1BQ659C4 914 aaKnown RBP10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 RCSD1Q6JBY9 416 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 SYNE3Q6ZMZ3 975 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 SLC44A5Q8NCS7 719 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 RGS22Q8NE09 1264 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 NEDD1Q8NHV4 660 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 ZBED3Q96IU2 234 aaPredicted RBP10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 PRMT6Q96LA8 375 aaPredicted RBP10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 MKNK2Q9HBH9 465 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 SWAP70Q9UH65 585 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 SIPA1L1O43166 1804 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 STK36Q9NRP7 1315 aa10.05□□□□□ -0.8
NUDCD3-209ENST00000487118 FZD9O00144 591 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 CDKL5O76039 1030 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 DDAH1O94760 285 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 HLA-DOAP06340 250 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 POTEIP0CG38 1075 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 POTEJP0CG39 1038 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 CALM1P0DP23 149 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 CALM2P0DP24 149 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 CALM3P0DP25 149 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 FDPSP14324 419 aaKnown RBP10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 RPS12P25398 132 aaKnown RBP10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 SOX10P56693 466 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 RTN1Q16799 776 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 CPLX2Q6PUV4 134 aaKnown RBP10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 MICU3Q86XE3 530 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 DGKHQ86XP1 1220 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 RAB11FIP4Q86YS3 637 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 ZNF444Q8N0Y2 327 aaPredicted RBP10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 FAM184AQ8NB25 1140 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 DDX11Q96FC9 970 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 MYL10Q9BUA6 226 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 DHX36Q9H2U1 1008 aaKnown RBP10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 TDRD3Q9H7E2 651 aaKnown RBP10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 IL17RBQ9NRM6 502 aa10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
NUDCD3-209ENST00000487118 CCDC196A0A1B0GTZ2 297 aa10.03□□□□□ -0.8
NUDCD3-209ENST00000487118 GLTPD2A6NH11 291 aa10.03□□□□□ -0.8
NUDCD3-209ENST00000487118 CPLX1O14810 134 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms