RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ZHX2Q9Y6X8 837 aa12.27□□□□□ -0.45
NEK4-204ENST00000487068 GPR25O00155 361 aa12.26□□□□□ -0.45
NEK4-204ENST00000487068 PRKAB2O43741 272 aa12.26□□□□□ -0.45
NEK4-204ENST00000487068 APPP05067 770 aa12.26□□□□□ -0.45
NEK4-204ENST00000487068 PTPRAP18433 802 aa12.26□□□□□ -0.45
NEK4-204ENST00000487068 CAP2P40123 477 aa12.26□□□□□ -0.45
NEK4-204ENST00000487068 NOM1Q5C9Z4 860 aaKnown RBP12.26□□□□□ -0.45
NEK4-204ENST00000487068 FOXP4Q8IVH2 680 aaPredicted RBP12.26□□□□□ -0.45
NEK4-204ENST00000487068 BRI3BPQ8WY22 251 aa12.26□□□□□ -0.45
NEK4-204ENST00000487068 EVI5LQ96CN4 794 aa12.26□□□□□ -0.45
NEK4-204ENST00000487068 AS3MTQ9HBK9 375 aa12.26□□□□□ -0.45
NEK4-204ENST00000487068 DCP1AQ9NPI6 582 aaPredicted RBP12.26□□□□□ -0.45
NEK4-204ENST00000487068 STAP2Q9UGK3 403 aa12.26□□□□□ -0.45
NEK4-204ENST00000487068 GPAA1O43292 621 aa12.25□□□□□ -0.45
NEK4-204ENST00000487068 ASNSP08243 561 aa12.25□□□□□ -0.45
NEK4-204ENST00000487068 TDO2P48775 406 aa12.25□□□□□ -0.45
NEK4-204ENST00000487068 MS4A4AQ96JQ5 239 aa12.25□□□□□ -0.45
NEK4-204ENST00000487068 EHD4Q9H223 541 aa12.25□□□□□ -0.45
NEK4-204ENST00000487068 DNAJC18Q9H819 358 aa12.25□□□□□ -0.45
NEK4-204ENST00000487068 ATP8A2Q9NTI2 1148 aa12.25□□□□□ -0.45
NEK4-204ENST00000487068 M0R2C6 588 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 MPHOSPH10O00566 681 aaKnown RBP12.24□□□□□ -0.45
NEK4-204ENST00000487068 CYP2D6P10635 497 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 GNAT2P19087 354 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 PLCD1P51178 756 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 MAP3K10Q02779 954 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 CRHR2Q13324 411 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 CERKLQ49MI3 558 aaPredicted RBP12.24□□□□□ -0.45
NEK4-204ENST00000487068 PLEKHM2Q8IWE5 1019 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 STK11IPQ8N1F8 1099 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 OSBP2Q969R2 916 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 FEZ1Q99689 392 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 CABP5Q9NP86 173 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 ARPP21Q9UBL0 812 aaPredicted RBP12.24□□□□□ -0.45
NEK4-204ENST00000487068 ZBTB21Q9ULJ3 1066 aa12.24□□□□□ -0.45
NEK4-204ENST00000487068 GREB1LQ9C091 1923 aaPredicted RBP12.23□□□□□ -0.45
NEK4-204ENST00000487068 USP17L5A8MUK1 530 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 BTBD19C9JJ37 291 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 FKTNO75072 461 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 GH2P01242 217 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 ABCB5Q2M3G0 1257 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 FAM43AQ8N2R8 423 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 STRBPQ96SI9 672 aaKnown RBP12.23□□□□□ -0.45
NEK4-204ENST00000487068 SEC62Q99442 399 aaKnown RBP12.23□□□□□ -0.45
NEK4-204ENST00000487068 PTPN18Q99952 460 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 CFHR5Q9BXR6 569 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 NACAP1Q9BZK3 213 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 KCNH4Q9UQ05 1017 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 PARP14Q460N5 1801 aa12.23□□□□□ -0.45
NEK4-204ENST00000487068 CYP2D7A0A087X1C5 515 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
NEK4-204ENST00000487068 MINDY4BA8MYZ0 360 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 USP17L12C9JPN9 530 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 USP17L21D6R901 530 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 PDHXO00330 501 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 CXCL11O14625 94 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 HMGCS2P54868 508 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 EVX2Q03828 476 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 SPP2Q13103 211 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 MTMR2Q13614 643 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 RRP1BQ14684 758 aaKnown RBP12.22□□□□□ -0.45
NEK4-204ENST00000487068 ZYXQ15942 572 aaKnown RBP12.22□□□□□ -0.45
NEK4-204ENST00000487068 SHROOM1Q2M3G4 852 aaPredicted RBP12.22□□□□□ -0.45
NEK4-204ENST00000487068 ZMYM1Q5SVZ6 1142 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 FASTKD5Q7L8L6 764 aaKnown RBP12.22□□□□□ -0.45
NEK4-204ENST00000487068 SLC44A5Q8NCS7 719 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 ZNF280CQ8ND82 737 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 TBC1D2Q9BYX2 928 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 NAPBQ9H115 298 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 DIAPH3Q9NSV4 1193 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 SWAP70Q9UH65 585 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 AFG3L2Q9Y4W6 797 aa12.22□□□□□ -0.45
NEK4-204ENST00000487068 COL11A1P12107 1806 aaPredicted RBP12.22□□□□□ -0.45
NEK4-204ENST00000487068 A0A0G2JLL6 359 aaPredicted RBP12.21□□□□□ -0.45
NEK4-204ENST00000487068 ECM2O94769 699 aaPredicted RBP12.21□□□□□ -0.45
NEK4-204ENST00000487068 SHMT1P34896 483 aa12.21□□□□□ -0.45
NEK4-204ENST00000487068 CCDC129Q6ZRS4 1044 aa12.21□□□□□ -0.45
NEK4-204ENST00000487068 PRRT2Q7Z6L0 340 aaPredicted RBP12.21□□□□□ -0.45
NEK4-204ENST00000487068 ANKRD23Q86SG2 305 aa12.21□□□□□ -0.45
NEK4-204ENST00000487068 SMCR8Q8TEV9 937 aaPredicted RBP12.21□□□□□ -0.45
NEK4-204ENST00000487068 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.45
NEK4-204ENST00000487068 PARK7Q99497 189 aaKnown RBP12.21□□□□□ -0.45
NEK4-204ENST00000487068 GINM1Q9NU53 330 aa12.21□□□□□ -0.45
NEK4-204ENST00000487068 TMOD4Q9NZQ9 345 aa12.21□□□□□ -0.45
NEK4-204ENST00000487068 DOCK3Q8IZD9 2030 aa12.2□□□□□ -0.46
NEK4-204ENST00000487068 GSG1L2A8MUP6 293 aa12.2□□□□□ -0.46
NEK4-204ENST00000487068 NMIQ13287 307 aaPredicted RBP12.2□□□□□ -0.46
NEK4-204ENST00000487068 C12orf60Q5U649 245 aa12.2□□□□□ -0.46
NEK4-204ENST00000487068 TATDN1Q6P1N9 297 aa12.2□□□□□ -0.46
NEK4-204ENST00000487068 CTR9Q6PD62 1173 aa12.2□□□□□ -0.46
NEK4-204ENST00000487068 METTL16Q86W50 562 aaKnown RBP12.2□□□□□ -0.46
NEK4-204ENST00000487068 CCDC136Q96JN2 1154 aa12.2□□□□□ -0.46
NEK4-204ENST00000487068 R3HDMLQ9H3Y0 253 aa12.2□□□□□ -0.46
NEK4-204ENST00000487068 OSBPL3Q9H4L5 887 aa12.2□□□□□ -0.46
NEK4-204ENST00000487068 MKNK2Q9HBH9 465 aa12.2□□□□□ -0.46
NEK4-204ENST00000487068 EPB41L4AQ9HCS5 686 aaPredicted RBP12.2□□□□□ -0.46
NEK4-204ENST00000487068 ZCCHC17Q9NP64 241 aaKnown RBP12.2□□□□□ -0.46
NEK4-204ENST00000487068 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms