RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 MED23Q9ULK4 1368 aa8.47□□□□□ -1.05
SMARCAL1-212ENST00000486983 XRCC6P12956 609 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 PDIA4P13667 645 aaKnown RBP8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 CASP7P55210 303 aa8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZNF445P59923 1031 aa8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 FAM43AQ8N2R8 423 aa8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 EAF2Q96CJ1 260 aaPredicted RBP8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 GRPEL1Q9HAV7 217 aa8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 GPR108Q9NPR9 543 aa8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 STRN4Q9NRL3 753 aa8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZDHHC9Q9Y397 364 aa8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 CCDC171Q6TFL3 1326 aa8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 RPAP1Q9BWH6 1393 aaPredicted RBP8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 TJP1Q07157 1748 aa8.46□□□□□ -1.06
SMARCAL1-212ENST00000486983 DYRK3O43781 588 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 MAP4K4O95819 1239 aaPredicted RBP8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 MBD3O95983 291 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 ATP5JP18859 108 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 PTPN12Q05209 780 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 PKP1Q13835 747 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 VPS53Q5VIR6 699 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 MCTP1Q6DN14 999 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 CWC27Q6UX04 472 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 TOM1L2Q6ZVM7 507 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZSCAN31Q96LW9 406 aaPredicted RBP8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 GZF1Q9H116 711 aaPredicted RBP8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 ALDH8A1Q9H2A2 487 aaPredicted RBP8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 ATG3Q9NT62 314 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 LMBRD1Q9NUN5 540 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 HMG20BQ9P0W2 317 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 PRR12Q9ULL5 1215 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 LIMCH1Q9UPQ0 1083 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 DDX49Q9Y6V7 483 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 WDR33Q9C0J8 1336 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 DISP2A7MBM2 1401 aa8.45□□□□□ -1.06
SMARCAL1-212ENST00000486983 COL22A1Q8NFW1 1626 aaPredicted RBP8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 TOGARAM1Q9Y4F4 1720 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZKSCAN1P17029 563 aaPredicted RBP8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 SMTNP53814 917 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 NECTIN1Q15223 517 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 SLFNL1Q499Z3 407 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 TNNI3KQ59H18 835 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 EPHA10Q5JZY3 1008 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 LCE3BQ5TA77 95 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 MEX3CQ5U5Q3 659 aaKnown RBP8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 CCDC191Q8NCU4 936 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 MAP4K1Q92918 833 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZIC5Q96T25 663 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 MDFIQ99750 246 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 TEX13AQ9BXU3 409 aaPredicted RBP8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 UPF3BQ9BZI7 483 aaKnown RBP8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 SH2B1Q9NRF2 756 aaPredicted RBP8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 USP3Q9Y6I4 520 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 FPGT-TNNI3KV9GXZ4 949 aa8.44□□□□□ -1.06
SMARCAL1-212ENST00000486983 AHDC1Q5TGY3 1603 aaPredicted RBP8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 COL14A1Q05707 1796 aaKnown RBP8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 SPEF2Q9C093 1822 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 ELOA3CA0A087WX78 387 aaPredicted RBP8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 A0A087WZG4 1122 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 ELOA3DA6NLF2 546 aaPredicted RBP8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 EFSO43281 561 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 CIAO1O76071 339 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 PSMA5P28066 241 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 AK2P54819 239 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 ELOA3BQ3SY89 546 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 PRRT3Q5FWE3 981 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 ARTNQ5T4W7 220 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 UBE3BQ7Z3V4 1068 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 TMEM87AQ8NBN3 555 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 ELOA3Q8NG57 546 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 CWC25Q9NXE8 425 aaPredicted RBP8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZDHHC3Q9NYG2 299 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 IQSEC3Q9UPP2 1182 aaPredicted RBP8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 PALLDQ8WX93 1383 aa8.43□□□□□ -1.06
SMARCAL1-212ENST00000486983 SPDYE3A6NKU9 549 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 CASTP20810 708 aaKnown RBP8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 IL15P40933 162 aaPredicted RBP8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 FOXO4P98177 505 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 TRIM28Q13263 835 aaKnown RBP8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 NMIQ13287 307 aaPredicted RBP8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 KRT32Q14532 448 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 ANKRD1Q15327 319 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 SAMD5Q5TGI4 173 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 USPL1Q5W0Q7 1092 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 RUFY3Q7L099 469 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 FSD1Q9BTV5 496 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 CCDC8Q9H0W5 538 aaPredicted RBP8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZFP64Q9NPA5 681 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 TLR7Q9NYK1 1049 aaKnown RBP8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 MARK1Q9P0L2 795 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 DBNLQ9UJU6 430 aaKnown RBP8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 RBM8AQ9Y5S9 174 aaKnown RBP8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 CYP46A1Q9Y6A2 500 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 ABCC12Q96J65 1359 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZNF609O15014 1411 aa8.42□□□□□ -1.06
SMARCAL1-212ENST00000486983 SH3TC1Q8TE82 1336 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms