RNA–Protein interactions for RNA: ENST00000486902.5

PDE9A-223, Transcript of phosphodiesterase 9A, human

TSL 2

Gene PDE9A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-223	ENST00000486902	TRMT44	Q8IYL2	757 aa	Known RBP	11.44	□□□□□ -0.58
PDE9A-223	ENST00000486902	USP6NL	Q92738	828 aa		11.44	□□□□□ -0.58
PDE9A-223	ENST00000486902	TIFA	Q96CG3	184 aa		11.44	□□□□□ -0.58
PDE9A-223	ENST00000486902	OCEL1	Q9H607	264 aa		11.44	□□□□□ -0.58
PDE9A-223	ENST00000486902	MORF4L1	Q9UBU8	362 aa		11.44	□□□□□ -0.58
PDE9A-223	ENST00000486902	CHD9	Q3L8U1	2897 aa		11.44	□□□□□ -0.58
PDE9A-223	ENST00000486902	DNM1L	O00429	736 aa		11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	BMP1	P13497	986 aa		11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	ITGB8	P26012	769 aa		11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	MRE11	P49959	708 aa		11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	SH3BP5L	Q7L8J4	393 aa		11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	TSPYL6	Q8N831	410 aa		11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	PUS3	Q9BZE2	481 aa	Known RBP	11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	MYH16	Q9H6N6	1097 aa		11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	TXNRD2	Q9NNW7	524 aa		11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	C11orf16	Q9NQ32	467 aa		11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	LRRFIP2	Q9Y608	721 aa	Known RBP	11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	TCF20	Q9UGU0	1960 aa	Known RBP	11.43	□□□□□ -0.58
PDE9A-223	ENST00000486902	FAM86C2P	A6NEL3	165 aa		11.42	□□□□□ -0.58
PDE9A-223	ENST00000486902	HMGCS2	P54868	508 aa		11.42	□□□□□ -0.58
PDE9A-223	ENST00000486902	TFF2	Q03403	129 aa		11.42	□□□□□ -0.58
PDE9A-223	ENST00000486902	CCDC57	Q2TAC2	916 aa		11.42	□□□□□ -0.58
PDE9A-223	ENST00000486902	GJC2	Q5T442	439 aa	Predicted RBP	11.42	□□□□□ -0.58
PDE9A-223	ENST00000486902	SLC39A5	Q6ZMH5	540 aa		11.42	□□□□□ -0.58
PDE9A-223	ENST00000486902	APBA2	Q99767	749 aa		11.42	□□□□□ -0.58
PDE9A-223	ENST00000486902	DDX20	Q9UHI6	824 aa	Known RBP	11.42	□□□□□ -0.58
PDE9A-223	ENST00000486902	SUGT1	Q9Y2Z0	365 aa		11.42	□□□□□ -0.58
PDE9A-223	ENST00000486902	DOCK1	Q14185	1865 aa		11.42	□□□□□ -0.58
PDE9A-223	ENST00000486902	LOC285556	D6RIA3	1793 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	CTNND1	O60716	968 aa	Known RBP	11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	IGFBP4	P22692	258 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	RGS2	P41220	211 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	RGS3	P49796	1198 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	KCNQ1	P51787	676 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	SPP2	Q13103	211 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	MORN1	Q5T089	497 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	LPAR1	Q92633	364 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	PORCN	Q9H237	461 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	RTN4	Q9NQC3	1192 aa	Known RBP	11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	USP40	Q9NVE5	1235 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	IFT57	Q9NWB7	429 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	FLRT1	Q9NZU1	646 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	DOCK2	Q92608	1830 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	MYO9B	Q13459	2157 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	XIRP2	A4UGR9	3374 aa		11.41	□□□□□ -0.58
PDE9A-223	ENST00000486902	DDTL	A6NHG4	134 aa	Predicted RBP	11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	CNGA1	P29973	690 aa		11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	PBX2	P40425	430 aa		11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	MAP3K10	Q02779	954 aa		11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	SNX17	Q15036	470 aa		11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	GPR142	Q7Z601	462 aa		11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	LINS1	Q8NG48	757 aa		11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	RUNDC1	Q96C34	613 aa		11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	P2RX7	Q99572	595 aa	Known RBP	11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	RLF	Q13129	1914 aa		11.4	□□□□□ -0.58
PDE9A-223	ENST00000486902	REV3L	O60673	3130 aa		11.4	□□□□□ -0.59
PDE9A-223	ENST00000486902	FAM196B	A6NMK8	535 aa		11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	GRXCR1	A8MXD5	290 aa		11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	MAPK4	P31152	587 aa		11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	CAVIN4	Q5BKX8	364 aa		11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	TRPV1	Q8NER1	839 aa		11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	GPRC5A	Q8NFJ5	357 aa		11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	DNAAF4	Q8WXU2	420 aa		11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	STK31	Q9BXU1	1019 aa		11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	CHD7	Q9P2D1	2997 aa		11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	RFX7	Q2KHR2	1363 aa		11.39	□□□□□ -0.59
PDE9A-223	ENST00000486902	GPR37L1	O60883	481 aa		11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902	PRDX5	P30044	214 aa		11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902	HERVK_113	P62684	666 aa		11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902	GNAI1	P63096	354 aa		11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902	IRX3	P78415	501 aa	Predicted RBP	11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902	TLE2	Q04725	743 aa		11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902		Q3C1V9	767 aa		11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902	MFSD14C	Q5VZR4	134 aa		11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902	PLEKHH3	Q7Z736	793 aa		11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902	ZNF280C	Q8ND82	737 aa		11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902	PBX4	Q9BYU1	374 aa		11.38	□□□□□ -0.59
PDE9A-223	ENST00000486902	UTY	O14607	1347 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	KBTBD13	C9JR72	458 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	MSC	O60682	206 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	ENTPD3	O75355	529 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	ADCYAP1R1	P41586	468 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	FPGS	Q05932	587 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	FLII	Q13045	1269 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	MAP2K5	Q13163	448 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	ANO1	Q5XXA6	986 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	FERMT2	Q96AC1	680 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	IDI2	Q9BXS1	227 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	DDX4	Q9NQI0	724 aa	Known RBP	11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	RBPJL	Q9UBG7	517 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	ADAMTS8	Q9UP79	889 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	NDUFB9	Q9Y6M9	179 aa		11.37	□□□□□ -0.59
PDE9A-223	ENST00000486902	CYP2C19	P33261	490 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms