RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 CDK5RAP2Q96SN8 1893 aa24.58■■□□□ 1.53
PHF1-208ENST00000486845 IGSF3O75054 1194 aa24.58■■□□□ 1.53
PHF1-208ENST00000486845 CYP2B6P20813 491 aa24.58■■□□□ 1.53
PHF1-208ENST00000486845 BMP8BP34820 402 aa24.58■■□□□ 1.53
PHF1-208ENST00000486845 HERVK_113P62684 666 aa24.58■■□□□ 1.53
PHF1-208ENST00000486845 FRAT1Q92837 279 aaPredicted RBP24.58■■□□□ 1.53
PHF1-208ENST00000486845 GDF15Q99988 308 aa24.58■■□□□ 1.53
PHF1-208ENST00000486845 NUDT12Q9BQG2 462 aa24.58■■□□□ 1.53
PHF1-208ENST00000486845 C11orf49Q9H6J7 331 aa24.58■■□□□ 1.53
PHF1-208ENST00000486845 DNAJC18Q9H819 358 aa24.58■■□□□ 1.53
PHF1-208ENST00000486845 OGDHLQ9ULD0 1010 aa24.58■■□□□ 1.53
PHF1-208ENST00000486845 USP17L10C9JJH3 530 aa24.57■■□□□ 1.52
PHF1-208ENST00000486845 XRCC5P13010 732 aaKnown RBP24.57■■□□□ 1.52
PHF1-208ENST00000486845 PDE3AQ14432 1141 aa24.57■■□□□ 1.52
PHF1-208ENST00000486845 TNNI3KQ59H18 835 aa24.57■■□□□ 1.52
PHF1-208ENST00000486845 MAP3K21Q5TCX8 1036 aa24.57■■□□□ 1.52
PHF1-208ENST00000486845 TRMT44Q8IYL2 757 aaKnown RBP24.57■■□□□ 1.52
PHF1-208ENST00000486845 GTF3C2Q8WUA4 911 aaPredicted RBP24.57■■□□□ 1.52
PHF1-208ENST00000486845 LRCH3Q96II8 777 aa24.57■■□□□ 1.52
PHF1-208ENST00000486845 ZBTB21Q9ULJ3 1066 aa24.57■■□□□ 1.52
PHF1-208ENST00000486845 FPGT-TNNI3KV9GXZ4 949 aa24.57■■□□□ 1.52
PHF1-208ENST00000486845 PRKAR2AP13861 404 aaKnown RBP24.56■■□□□ 1.52
PHF1-208ENST00000486845 MAPK4P31152 587 aa24.56■■□□□ 1.52
PHF1-208ENST00000486845 JAG1P78504 1218 aa24.56■■□□□ 1.52
PHF1-208ENST00000486845 OS9Q13438 667 aaPredicted RBP24.56■■□□□ 1.52
PHF1-208ENST00000486845 DBNDD2Q9BQY9 259 aa24.56■■□□□ 1.52
PHF1-208ENST00000486845 TXNRD2Q9NNW7 524 aa24.56■■□□□ 1.52
PHF1-208ENST00000486845 PALD1Q9ULE6 856 aa24.56■■□□□ 1.52
PHF1-208ENST00000486845 ZMYND8Q9ULU4 1186 aaPredicted RBP24.56■■□□□ 1.52
PHF1-208ENST00000486845 TNNQ9UQP3 1299 aa24.56■■□□□ 1.52
PHF1-208ENST00000486845 GDF11O95390 407 aa24.55■■□□□ 1.52
PHF1-208ENST00000486845 CYP2E1P05181 493 aaPredicted RBP24.55■■□□□ 1.52
PHF1-208ENST00000486845 HLA-DOAP06340 250 aa24.55■■□□□ 1.52
PHF1-208ENST00000486845 MNX1P50219 401 aaPredicted RBP24.55■■□□□ 1.52
PHF1-208ENST00000486845 ADGRA1Q86SQ6 560 aa24.55■■□□□ 1.52
PHF1-208ENST00000486845 CLUAP1Q96AJ1 413 aa24.55■■□□□ 1.52
PHF1-208ENST00000486845 ZKSCAN1P17029 563 aaPredicted RBP24.54■■□□□ 1.52
PHF1-208ENST00000486845 POLA2Q14181 598 aa24.54■■□□□ 1.52
PHF1-208ENST00000486845 CCAR1Q8IX12 1150 aaKnown RBP24.54■■□□□ 1.52
PHF1-208ENST00000486845 SLC17A8Q8NDX2 589 aa24.54■■□□□ 1.52
PHF1-208ENST00000486845 ZNF512BQ96KM6 892 aaPredicted RBP24.54■■□□□ 1.52
PHF1-208ENST00000486845 RBPJLQ9UBG7 517 aa24.54■■□□□ 1.52
PHF1-208ENST00000486845 LAMA3Q16787 3333 aa24.53■■□□□ 1.52
PHF1-208ENST00000486845 PEX10O60683 326 aa24.53■■□□□ 1.52
PHF1-208ENST00000486845 BCAR3O75815 825 aa24.53■■□□□ 1.52
PHF1-208ENST00000486845 ERVK-9P63128 1117 aa24.53■■□□□ 1.52
PHF1-208ENST00000486845 ERVK-24P63145 666 aa24.53■■□□□ 1.52
PHF1-208ENST00000486845 SHROOM1Q2M3G4 852 aaPredicted RBP24.53■■□□□ 1.52
PHF1-208ENST00000486845 SAP30BPQ9UHR5 308 aaKnown RBP24.53■■□□□ 1.52
PHF1-208ENST00000486845 RGS2P41220 211 aa24.52■■□□□ 1.52
PHF1-208ENST00000486845 GPR153Q6NV75 609 aa24.52■■□□□ 1.52
PHF1-208ENST00000486845 USP17L2Q6R6M4 530 aa24.52■■□□□ 1.52
PHF1-208ENST00000486845 SSH3Q8TE77 659 aa24.52■■□□□ 1.52
PHF1-208ENST00000486845 MYO5AQ9Y4I1 1855 aaKnown RBP24.51■■□□□ 1.51
PHF1-208ENST00000486845 ZAP70P43403 619 aa24.51■■□□□ 1.51
PHF1-208ENST00000486845 USP6NLQ92738 828 aa24.51■■□□□ 1.51
PHF1-208ENST00000486845 PAGR1Q9BTK6 254 aa24.51■■□□□ 1.51
PHF1-208ENST00000486845 PIH1D3Q9NQM4 214 aaKnown RBP24.51■■□□□ 1.51
PHF1-208ENST00000486845 EMILIN3Q9NT22 766 aa24.51■■□□□ 1.51
PHF1-208ENST00000486845 CCER2I3L3R5 266 aa24.5■■□□□ 1.51
PHF1-208ENST00000486845 SURF6O75683 361 aaKnown RBP24.5■■□□□ 1.51
PHF1-208ENST00000486845 SYN1P17600 705 aa24.5■■□□□ 1.51
PHF1-208ENST00000486845 MAGEA10P43363 369 aaPredicted RBP24.5■■□□□ 1.51
PHF1-208ENST00000486845 CACNB2Q08289 660 aaPredicted RBP24.5■■□□□ 1.51
PHF1-208ENST00000486845 MORN1Q5T089 497 aa24.5■■□□□ 1.51
PHF1-208ENST00000486845 GPR142Q7Z601 462 aa24.5■■□□□ 1.51
PHF1-208ENST00000486845 PLEKHH3Q7Z736 793 aa24.5■■□□□ 1.51
PHF1-208ENST00000486845 CERS3Q8IU89 383 aa24.5■■□□□ 1.51
PHF1-208ENST00000486845 TMEM57Q8N5G2 664 aa24.5■■□□□ 1.51
PHF1-208ENST00000486845 APBA2Q99767 749 aa24.5■■□□□ 1.51
PHF1-208ENST00000486845 PORCNQ9H237 461 aa24.5■■□□□ 1.51
PHF1-208ENST00000486845 CYP7A1P22680 504 aa24.49■■□□□ 1.51
PHF1-208ENST00000486845 DYNLL1P63167 89 aaKnown RBP24.49■■□□□ 1.51
PHF1-208ENST00000486845 ATP8B2P98198 1209 aa24.49■■□□□ 1.51
PHF1-208ENST00000486845 Q3C1V9 767 aa24.49■■□□□ 1.51
PHF1-208ENST00000486845 ZKSCAN2Q63HK3 967 aa24.49■■□□□ 1.51
PHF1-208ENST00000486845 CWC22Q9HCG8 908 aaKnown RBP24.49■■□□□ 1.51
PHF1-208ENST00000486845 PFASO15067 1338 aa24.49■■□□□ 1.51
PHF1-208ENST00000486845 MYH1P12882 1939 aa24.49■■□□□ 1.51
PHF1-208ENST00000486845 GH2P01242 217 aa24.48■■□□□ 1.51
PHF1-208ENST00000486845 LRIT3Q3SXY7 679 aa24.48■■□□□ 1.51
PHF1-208ENST00000486845 C12orf42Q96LP6 360 aa24.48■■□□□ 1.51
PHF1-208ENST00000486845 FEZ1Q99689 392 aa24.48■■□□□ 1.51
PHF1-208ENST00000486845 DBNLQ9UJU6 430 aaKnown RBP24.48■■□□□ 1.51
PHF1-208ENST00000486845 RABGAP1Q9Y3P9 1069 aa24.48■■□□□ 1.51
PHF1-208ENST00000486845 COL6A1P12109 1028 aa24.47■■□□□ 1.51
PHF1-208ENST00000486845 CCL14Q16627 93 aa24.47■■□□□ 1.51
PHF1-208ENST00000486845 TDHQ8IZJ6 230 aa24.47■■□□□ 1.51
PHF1-208ENST00000486845 USP17L15C9J2P7 530 aa24.46■■□□□ 1.51
PHF1-208ENST00000486845 USP17L13C9JLJ4 530 aa24.46■■□□□ 1.51
PHF1-208ENST00000486845 USP17L11C9JVI0 530 aa24.46■■□□□ 1.51
PHF1-208ENST00000486845 USP17L18D6R9N7 530 aa24.46■■□□□ 1.51
PHF1-208ENST00000486845 USP17L22D6RA61 530 aa24.46■■□□□ 1.51
PHF1-208ENST00000486845 USP17L17D6RBQ6 530 aa24.46■■□□□ 1.51
PHF1-208ENST00000486845 USP17L19D6RCP7 530 aa24.46■■□□□ 1.51
PHF1-208ENST00000486845 USP17L20D6RJB6 530 aa24.46■■□□□ 1.51
PHF1-208ENST00000486845 DLL1O00548 723 aa24.46■■□□□ 1.51
PHF1-208ENST00000486845 IDH1O75874 414 aaKnown RBP24.46■■□□□ 1.51
PHF1-208ENST00000486845 GLRX3O76003 335 aaKnown RBP24.46■■□□□ 1.51
PHF1-208ENST00000486845 CCND3P30281 292 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms