RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 COG5Q9UP83 839 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 SUGT1Q9Y2Z0 365 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 ZDBF2Q9HCK1 2354 aa10.56□□□□□ -0.72
APTX-228ENST00000486724 PI4KAP2A4QPH2 592 aa10.55□□□□□ -0.72
APTX-228ENST00000486724 GRXCR1A8MXD5 290 aa10.55□□□□□ -0.72
APTX-228ENST00000486724 CCDC174Q6PII3 467 aa10.55□□□□□ -0.72
APTX-228ENST00000486724 GPR142Q7Z601 462 aa10.55□□□□□ -0.72
APTX-228ENST00000486724 CCDC84Q86UT8 332 aaPredicted RBP10.55□□□□□ -0.72
APTX-228ENST00000486724 PI4KAP1Q8N8J0 262 aa10.55□□□□□ -0.72
APTX-228ENST00000486724 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.55□□□□□ -0.723e-6■■□□□ 12.8
APTX-228ENST00000486724 SLC28A3Q9HAS3 691 aa10.55□□□□□ -0.72
APTX-228ENST00000486724 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.55□□□□□ -0.72
APTX-228ENST00000486724 FAM198AQ9UFP1 575 aa10.55□□□□□ -0.72
APTX-228ENST00000486724 IQSEC3Q9UPP2 1182 aaPredicted RBP10.55□□□□□ -0.72
APTX-228ENST00000486724 HMGCS2P54868 508 aa10.54□□□□□ -0.72
APTX-228ENST00000486724 IRX3P78415 501 aaPredicted RBP10.54□□□□□ -0.72
APTX-228ENST00000486724 MAP2K5Q13163 448 aa10.54□□□□□ -0.72
APTX-228ENST00000486724 GCKRQ14397 625 aa10.54□□□□□ -0.72
APTX-228ENST00000486724 CDC42EP5Q6NZY7 148 aa10.54□□□□□ -0.72
APTX-228ENST00000486724 LDHAL6AQ6ZMR3 332 aa10.54□□□□□ -0.72
APTX-228ENST00000486724 PLEKHH3Q7Z736 793 aa10.54□□□□□ -0.72
APTX-228ENST00000486724 CWC22Q9HCG8 908 aaKnown RBP10.54□□□□□ -0.72
APTX-228ENST00000486724 CNNM1Q9NRU3 951 aa10.54□□□□□ -0.72
APTX-228ENST00000486724 CHMP3Q9Y3E7 222 aa10.54□□□□□ -0.72
APTX-228ENST00000486724 MYCNP04198 464 aaPredicted RBP10.53□□□□□ -0.72
APTX-228ENST00000486724 ADCYAP1R1P41586 468 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 CASP7P55210 303 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 MAP3K10Q02779 954 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 SPP2Q13103 211 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 TAF7LQ5H9L4 462 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 RASIP1Q5U651 963 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 ZNF280CQ8ND82 737 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 FERMT2Q96AC1 680 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 EDC3Q96F86 508 aaKnown RBP10.53□□□□□ -0.72
APTX-228ENST00000486724 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 PORCNQ9H237 461 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 TXNRD2Q9NNW7 524 aa10.53□□□□□ -0.72
APTX-228ENST00000486724 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
APTX-228ENST00000486724 PEX10O60683 326 aa10.52□□□□□ -0.73
APTX-228ENST00000486724 GLRX3O76003 335 aaKnown RBP10.52□□□□□ -0.73
APTX-228ENST00000486724 HERVK_113P62684 666 aa10.52□□□□□ -0.73
APTX-228ENST00000486724 ERVK-9P63128 1117 aa10.52□□□□□ -0.73
APTX-228ENST00000486724 ERVK-24P63145 666 aa10.52□□□□□ -0.73
APTX-228ENST00000486724 ZSCAN29Q8IWY8 852 aaPredicted RBP10.52□□□□□ -0.73
APTX-228ENST00000486724 WWC1Q8IX03 1113 aa10.52□□□□□ -0.73
APTX-228ENST00000486724 ZFPM1Q8IX07 1006 aa10.52□□□□□ -0.73
APTX-228ENST00000486724 NKX2-4Q9H2Z4 354 aa10.52□□□□□ -0.73
APTX-228ENST00000486724 TMEM39AQ9NV64 488 aa10.52□□□□□ -0.73
APTX-228ENST00000486724 FLRT1Q9NZU1 646 aa10.52□□□□□ -0.73
APTX-228ENST00000486724 GBF1Q92538 1859 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 GTPBP6O43824 516 aaPredicted RBP10.51□□□□□ -0.73
APTX-228ENST00000486724 PQBP1O60828 265 aaKnown RBP10.51□□□□□ -0.73
APTX-228ENST00000486724 CYBAP13498 195 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 ALADP13716 330 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 ATP2B2Q01814 1243 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 PPIGQ13427 754 aaKnown RBP eCLIP10.51□□□□□ -0.73
APTX-228ENST00000486724 CCDC57Q2TAC2 916 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 CAVIN4Q5BKX8 364 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 FBXO33Q7Z6M2 555 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 WDR63Q8IWG1 891 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 SLC44A5Q8NCS7 719 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 TRPV1Q8NER1 839 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 HLA-CQ95604 372 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 CHMP4AQ9BY43 222 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 MYH16Q9H6N6 1097 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 CD320Q9NPF0 282 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 USP40Q9NVE5 1235 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 TRIM35Q9UPQ4 493 aa10.51□□□□□ -0.73
APTX-228ENST00000486724 A0A0G2JMZ2 1700 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 SPTBN4Q9H254 2564 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 ATAD5Q96QE3 1844 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 ENTPD3O75355 529 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 HOXA7P31268 230 aaPredicted RBP10.5□□□□□ -0.73
APTX-228ENST00000486724 CYP2C19P33261 490 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 RGS3P49796 1198 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 LRRC41Q15345 812 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 NEUROD2Q15784 382 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 SH3D19Q5HYK7 790 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 TMEM240Q5SV17 173 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 CCDC30Q5VVM6 783 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 PPP2R2DQ66LE6 453 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 PSRC1Q6PGN9 363 aaPredicted RBP10.5□□□□□ -0.73
APTX-228ENST00000486724 GTF3C2Q8WUA4 911 aaPredicted RBP10.5□□□□□ -0.73
APTX-228ENST00000486724 ZNF594Q96JF6 807 aaPredicted RBP10.5□□□□□ -0.73
APTX-228ENST00000486724 PHOX2BQ99453 314 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.5□□□□□ -0.73
APTX-228ENST00000486724 MBIPQ9NS73 344 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 RBPJLQ9UBG7 517 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 NOP58Q9Y2X3 529 aaKnown RBP10.5□□□□□ -0.73
APTX-228ENST00000486724 IL16Q14005 1332 aa10.5□□□□□ -0.73
APTX-228ENST00000486724 E9PSI1 815 aa10.49□□□□□ -0.73
APTX-228ENST00000486724 ELL2O00472 640 aaPredicted RBP10.49□□□□□ -0.73
APTX-228ENST00000486724 SEPT4O43236 478 aa10.49□□□□□ -0.73
APTX-228ENST00000486724 TIMP1P01033 207 aa10.49□□□□□ -0.73
APTX-228ENST00000486724 HOXC6P09630 235 aa10.49□□□□□ -0.73
APTX-228ENST00000486724 POU3F3P20264 500 aaPredicted RBP10.49□□□□□ -0.73
APTX-228ENST00000486724 FOXO4P98177 505 aa10.49□□□□□ -0.73
APTX-228ENST00000486724 DIXDC1Q155Q3 683 aa10.49□□□□□ -0.73
APTX-228ENST00000486724 ANO1Q5XXA6 986 aa10.49□□□□□ -0.73
APTX-228ENST00000486724 MFSD5Q6N075 450 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms