RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 TPSG1Q9NRR2 321 aa9.39□□□□□ -0.91
RTN4-214ENST00000486085 USP35Q9P2H5 1018 aa9.39□□□□□ -0.91
RTN4-214ENST00000486085 STRIP2Q9ULQ0 834 aa9.39□□□□□ -0.91
RTN4-214ENST00000486085 DYNC1LI2O43237 492 aaPredicted RBP9.38□□□□□ -0.91
RTN4-214ENST00000486085 DNAJA2O60884 412 aa9.38□□□□□ -0.91
RTN4-214ENST00000486085 GTF2F1P35269 517 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTN4-214ENST00000486085 DOC2BQ14184 412 aa9.38□□□□□ -0.91
RTN4-214ENST00000486085 PAOXQ6QHF9 649 aa9.38□□□□□ -0.91
RTN4-214ENST00000486085 CLEC10AQ8IUN9 316 aa9.38□□□□□ -0.91
RTN4-214ENST00000486085 DPH2Q9BQC3 489 aaPredicted RBP9.38□□□□□ -0.91
RTN4-214ENST00000486085 LRRFIP1Q32MZ4 808 aaKnown RBP9.37□□□□□ -0.91
RTN4-214ENST00000486085 SLC6A19Q695T7 634 aa9.37□□□□□ -0.91
RTN4-214ENST00000486085 MRPL41Q8IXM3 137 aaKnown RBP9.37□□□□□ -0.91
RTN4-214ENST00000486085 DHX38Q92620 1227 aaKnown RBP9.37□□□□□ -0.91
RTN4-214ENST00000486085 SHDQ96IW2 340 aa9.37□□□□□ -0.91
RTN4-214ENST00000486085 FAM83CQ9BQN1 747 aa9.37□□□□□ -0.91
RTN4-214ENST00000486085 GMIPQ9P107 970 aa9.37□□□□□ -0.91
RTN4-214ENST00000486085 STOML1Q9UBI4 398 aa9.37□□□□□ -0.91
RTN4-214ENST00000486085 RAXQ9Y2V3 346 aa9.37□□□□□ -0.91
RTN4-214ENST00000486085 HMX2A2RU54 273 aa9.36□□□□□ -0.91
RTN4-214ENST00000486085 ETFBP38117 255 aa9.36□□□□□ -0.91
RTN4-214ENST00000486085 GIPRP48546 466 aa9.36□□□□□ -0.91
RTN4-214ENST00000486085 YARSP54577 528 aaKnown RBP9.36□□□□□ -0.91
RTN4-214ENST00000486085 ARSHQ5FYA8 562 aa9.36□□□□□ -0.91
RTN4-214ENST00000486085 PRAMEF13Q5VWM6 474 aa9.36□□□□□ -0.91
RTN4-214ENST00000486085 OVOS1Q6IE37 1185 aa9.36□□□□□ -0.91
RTN4-214ENST00000486085 XAGE3Q8WTP9 111 aa9.36□□□□□ -0.91
RTN4-214ENST00000486085 FOXQ1Q9C009 403 aa9.36□□□□□ -0.91
RTN4-214ENST00000486085 CST3P01034 146 aaPredicted RBP9.35□□□□□ -0.91
RTN4-214ENST00000486085 CDK5R2Q13319 367 aa9.35□□□□□ -0.91
RTN4-214ENST00000486085 SEZ6L2Q6UXD5 910 aa9.35□□□□□ -0.91
RTN4-214ENST00000486085 RUFY4Q6ZNE9 571 aa9.35□□□□□ -0.91
RTN4-214ENST00000486085 PRR23CQ6ZRP0 262 aa9.35□□□□□ -0.91
RTN4-214ENST00000486085 ARMCX6Q7L4S7 300 aa9.35□□□□□ -0.91
RTN4-214ENST00000486085 TMEM40Q8WWA1 233 aa9.35□□□□□ -0.91
RTN4-214ENST00000486085 ATG4CQ96DT6 458 aa9.35□□□□□ -0.91
RTN4-214ENST00000486085 C7orf69Q9H7B7 122 aa9.35□□□□□ -0.91
RTN4-214ENST00000486085 STK10O94804 968 aaKnown RBP9.34□□□□□ -0.91
RTN4-214ENST00000486085 CAP2P40123 477 aa9.34□□□□□ -0.91
RTN4-214ENST00000486085 GPAT2Q6NUI2 795 aa9.34□□□□□ -0.91
RTN4-214ENST00000486085 LSRQ86X29 649 aaPredicted RBP9.34□□□□□ -0.91
RTN4-214ENST00000486085 RBBP8NLQ8NC74 664 aaPredicted RBP9.34□□□□□ -0.91
RTN4-214ENST00000486085 SPOCK3Q9BQ16 436 aa9.34□□□□□ -0.91
RTN4-214ENST00000486085 ZNF408Q9H9D4 720 aa9.34□□□□□ -0.91
RTN4-214ENST00000486085 C1GALT1Q9NS00 363 aa9.34□□□□□ -0.91
RTN4-214ENST00000486085 MEIS3P2A8K0S8 358 aa9.33□□□□□ -0.92
RTN4-214ENST00000486085 LRIG2O94898 1065 aa9.33□□□□□ -0.92
RTN4-214ENST00000486085 RAG1P15918 1043 aa9.33□□□□□ -0.92
RTN4-214ENST00000486085 NLRC3Q7RTR2 1065 aa9.33□□□□□ -0.92
RTN4-214ENST00000486085 PHACTR4Q8IZ21 702 aa9.33□□□□□ -0.92
RTN4-214ENST00000486085 MSTNO14793 375 aa9.32□□□□□ -0.92
RTN4-214ENST00000486085 PROCP04070 461 aa9.32□□□□□ -0.92
RTN4-214ENST00000486085 NME1P15531 152 aaKnown RBP9.32□□□□□ -0.92
RTN4-214ENST00000486085 CDCP2Q5VXM1 449 aa9.32□□□□□ -0.92
RTN4-214ENST00000486085 SLFN12Q8IYM2 578 aa9.32□□□□□ -0.92
RTN4-214ENST00000486085 FAM169BQ8N8A8 192 aa9.32□□□□□ -0.92
RTN4-214ENST00000486085 MFSD2AQ8NA29 543 aa9.32□□□□□ -0.92
RTN4-214ENST00000486085 OR6P1Q8NGX9 317 aa9.32□□□□□ -0.92
RTN4-214ENST00000486085 KIF2CQ99661 725 aa9.32□□□□□ -0.92
RTN4-214ENST00000486085 CNNM2Q9H8M5 875 aa9.32□□□□□ -0.92
RTN4-214ENST00000486085 FAM86C2PA6NEL3 165 aa9.31□□□□□ -0.92
RTN4-214ENST00000486085 SMAD7O15105 426 aaKnown RBP9.31□□□□□ -0.92
RTN4-214ENST00000486085 PPP2R5EQ16537 467 aa9.31□□□□□ -0.92
RTN4-214ENST00000486085 TOP6BLQ8N6T0 577 aa9.31□□□□□ -0.92
RTN4-214ENST00000486085 TBC1D32Q96NH3 1257 aa9.31□□□□□ -0.92
RTN4-214ENST00000486085 PSMG3-AS1Q96PY0 264 aa9.31□□□□□ -0.92
RTN4-214ENST00000486085 MIPEPQ99797 713 aa9.31□□□□□ -0.92
RTN4-214ENST00000486085 TM9SF2Q99805 663 aa9.31□□□□□ -0.92
RTN4-214ENST00000486085 PRDM10Q9NQV6 1147 aa9.31□□□□□ -0.92
RTN4-214ENST00000486085 POLR2BP30876 1174 aaKnown RBP9.3□□□□□ -0.92
RTN4-214ENST00000486085 GBP1P32455 592 aa9.3□□□□□ -0.92
RTN4-214ENST00000486085 ADMP35318 185 aa9.3□□□□□ -0.92
RTN4-214ENST00000486085 SHISA5Q8N114 240 aa9.3□□□□□ -0.92
RTN4-214ENST00000486085 FBXL6Q8N531 539 aa9.3□□□□□ -0.92
RTN4-214ENST00000486085 GIMAP7Q8NHV1 300 aa9.3□□□□□ -0.92
RTN4-214ENST00000486085 BAHD1Q8TBE0 780 aaPredicted RBP9.3□□□□□ -0.92
RTN4-214ENST00000486085 CCDC74BQ96LY2 380 aa9.3□□□□□ -0.92
RTN4-214ENST00000486085 MFSD14AQ96MC6 490 aa9.3□□□□□ -0.92
RTN4-214ENST00000486085 PRKAG3Q9UGI9 489 aa9.3□□□□□ -0.92
RTN4-214ENST00000486085 LEFTY1O75610 366 aa9.29□□□□□ -0.92
RTN4-214ENST00000486085 ACRP10323 421 aa9.29□□□□□ -0.92
RTN4-214ENST00000486085 ANKS3Q6ZW76 656 aa9.29□□□□□ -0.92
RTN4-214ENST00000486085 RIN3Q8TB24 985 aa9.29□□□□□ -0.92
RTN4-214ENST00000486085 CYB5D2Q8WUJ1 264 aa9.29□□□□□ -0.92
RTN4-214ENST00000486085 UBXN4Q92575 508 aa9.29□□□□□ -0.92
RTN4-214ENST00000486085 SLC9A7Q96T83 725 aa9.29□□□□□ -0.92
RTN4-214ENST00000486085 DNAJC2Q99543 621 aaKnown RBP9.29□□□□□ -0.92
RTN4-214ENST00000486085 TNFRSF10CO14798 259 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 SLITRK5O94991 958 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 H2AFB1P0C5Y9 115 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 H2AFB2P0C5Z0 115 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 FAM87AP0C7U9 286 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 GUCY2CP25092 1073 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 RNF43Q68DV7 783 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 INTS3Q68E01 1043 aaKnown RBP9.28□□□□□ -0.92
RTN4-214ENST00000486085 LETMD1Q6P1Q0 360 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 ZAR1Q86SH2 424 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 ARMC5Q96C12 935 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 DUSP23Q9BVJ7 150 aa9.28□□□□□ -0.92
RTN4-214ENST00000486085 R3HCC1Q9Y3T6 440 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 516.2 ms