RNA–Protein interactions for RNA: ENST00000485941.2

NBPF3-211, Transcript of NBPF member 3, humanhuman

TSL 1 (best)

Gene NBPF3, Length 921 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-211ENST00000485941 PALD1Q9ULE6 856 aa28.54■■■□□ 2.16
NBPF3-211ENST00000485941 NR2E3Q9Y5X4 410 aa28.54■■■□□ 2.16
NBPF3-211ENST00000485941 LAMA3Q16787 3333 aa28.54■■■□□ 2.16
NBPF3-211ENST00000485941 SURF6O75683 361 aaKnown RBP28.53■■■□□ 2.16
NBPF3-211ENST00000485941 TFRCP02786 760 aaKnown RBP28.53■■■□□ 2.16
NBPF3-211ENST00000485941 RLBP1P12271 317 aa28.53■■■□□ 2.16
NBPF3-211ENST00000485941 MNX1P50219 401 aaPredicted RBP28.53■■■□□ 2.16
NBPF3-211ENST00000485941 P2RX7Q99572 595 aaKnown RBP28.53■■■□□ 2.16
NBPF3-211ENST00000485941 NOL10Q9BSC4 688 aaKnown RBP28.53■■■□□ 2.16
NBPF3-211ENST00000485941 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.53■■■□□ 2.16
NBPF3-211ENST00000485941 C1orf115Q9H7X2 142 aa28.53■■■□□ 2.16
NBPF3-211ENST00000485941 TXNRD2Q9NNW7 524 aa28.53■■■□□ 2.16
NBPF3-211ENST00000485941 PEX10O60683 326 aa28.52■■■□□ 2.16
NBPF3-211ENST00000485941 HMGCRP04035 888 aa28.52■■■□□ 2.16
NBPF3-211ENST00000485941 TRIM32Q13049 653 aa28.52■■■□□ 2.16
NBPF3-211ENST00000485941 EAF2Q96CJ1 260 aaPredicted RBP28.52■■■□□ 2.16
NBPF3-211ENST00000485941 ALPK3Q96L96 1907 aa28.51■■■□□ 2.16
NBPF3-211ENST00000485941 DYNLL1P63167 89 aaKnown RBP28.51■■■□□ 2.15
NBPF3-211ENST00000485941 PAWRQ96IZ0 340 aaKnown RBP28.51■■■□□ 2.15
NBPF3-211ENST00000485941 TAOK2Q9UL54 1235 aa28.51■■■□□ 2.15
NBPF3-211ENST00000485941 ZBTB21Q9ULJ3 1066 aa28.51■■■□□ 2.15
NBPF3-211ENST00000485941 C19orf81C9J6K1 198 aa28.5■■■□□ 2.15
NBPF3-211ENST00000485941 MAP3K21Q5TCX8 1036 aa28.5■■■□□ 2.15
NBPF3-211ENST00000485941 DIS3LQ8TF46 1054 aaKnown RBP28.5■■■□□ 2.15
NBPF3-211ENST00000485941 RBPJLQ9UBG7 517 aa28.5■■■□□ 2.15
NBPF3-211ENST00000485941 RPTORQ8N122 1335 aa28.49■■■□□ 2.15
NBPF3-211ENST00000485941 USP17L10C9JJH3 530 aa28.49■■■□□ 2.15
NBPF3-211ENST00000485941 GDF11O95390 407 aa28.49■■■□□ 2.15
NBPF3-211ENST00000485941 HERVK_113P62684 666 aa28.49■■■□□ 2.15
NBPF3-211ENST00000485941 CCDC8Q9H0W5 538 aaPredicted RBP28.49■■■□□ 2.15
NBPF3-211ENST00000485941 EMILIN3Q9NT22 766 aa28.49■■■□□ 2.15
NBPF3-211ENST00000485941 OS9Q13438 667 aaPredicted RBP28.48■■■□□ 2.15
NBPF3-211ENST00000485941 ANKLE1Q8NAG6 615 aa28.48■■■□□ 2.15
NBPF3-211ENST00000485941 TRIB2Q92519 343 aa28.48■■■□□ 2.15
NBPF3-211ENST00000485941 USP6NLQ92738 828 aa28.48■■■□□ 2.15
NBPF3-211ENST00000485941 Q3C1V9 767 aa28.47■■■□□ 2.15
NBPF3-211ENST00000485941 TATDN1Q6P1N9 297 aa28.47■■■□□ 2.15
NBPF3-211ENST00000485941 TMOD4Q9NZQ9 345 aa28.47■■■□□ 2.15
NBPF3-211ENST00000485941 SAP30BPQ9UHR5 308 aaKnown RBP28.47■■■□□ 2.15
NBPF3-211ENST00000485941 EVI5O60447 810 aa28.46■■■□□ 2.15
NBPF3-211ENST00000485941 CYP7A1P22680 504 aa28.46■■■□□ 2.15
NBPF3-211ENST00000485941 IRX3P78415 501 aaPredicted RBP28.46■■■□□ 2.15
NBPF3-211ENST00000485941 A0A1W2PPC1 479 aa28.45■■■□□ 2.14
NBPF3-211ENST00000485941 XRCC5P13010 732 aaKnown RBP28.45■■■□□ 2.14
NBPF3-211ENST00000485941 NECAB2Q7Z6G3 386 aa28.45■■■□□ 2.14
NBPF3-211ENST00000485941 CRACR2BQ8N4Y2 399 aaPredicted RBP28.45■■■□□ 2.14
NBPF3-211ENST00000485941 GPRC5AQ8NFJ5 357 aa28.45■■■□□ 2.14
NBPF3-211ENST00000485941 C12orf42Q96LP6 360 aa28.45■■■□□ 2.14
NBPF3-211ENST00000485941 HMX1Q9NP08 348 aaPredicted RBP28.45■■■□□ 2.14
NBPF3-211ENST00000485941 OGDHLQ9ULD0 1010 aa28.45■■■□□ 2.14
NBPF3-211ENST00000485941 CEP85Q6P2H3 762 aa28.44■■■□□ 2.14
NBPF3-211ENST00000485941 ANTXR1Q9H6X2 564 aa28.44■■■□□ 2.14
NBPF3-211ENST00000485941 NDUFB9Q9Y6M9 179 aa28.44■■■□□ 2.14
NBPF3-211ENST00000485941 MIGA1Q8NAN2 632 aa28.43■■■□□ 2.14
NBPF3-211ENST00000485941 EHD4Q9H223 541 aa28.43■■■□□ 2.14
NBPF3-211ENST00000485941 PORCNQ9H237 461 aa28.43■■■□□ 2.14
NBPF3-211ENST00000485941 GH2P01242 217 aa28.42■■■□□ 2.14
NBPF3-211ENST00000485941 HLA-DOAP06340 250 aa28.42■■■□□ 2.14
NBPF3-211ENST00000485941 CYP2B6P20813 491 aa28.42■■■□□ 2.14
NBPF3-211ENST00000485941 ERVK-9P63128 1117 aa28.42■■■□□ 2.14
NBPF3-211ENST00000485941 ERVK-24P63145 666 aa28.42■■■□□ 2.14
NBPF3-211ENST00000485941 MORN1Q5T089 497 aa28.42■■■□□ 2.14
NBPF3-211ENST00000485941 IDH1O75874 414 aaKnown RBP28.41■■■□□ 2.14
NBPF3-211ENST00000485941 USP17L2Q6R6M4 530 aa28.41■■■□□ 2.14
NBPF3-211ENST00000485941 CERS3Q8IU89 383 aa28.41■■■□□ 2.14
NBPF3-211ENST00000485941 ITPRIPQ8IWB1 547 aa28.41■■■□□ 2.14
NBPF3-211ENST00000485941 MAGEB6Q8N7X4 407 aa28.41■■■□□ 2.14
NBPF3-211ENST00000485941 SOCS4Q8WXH5 440 aa28.41■■■□□ 2.14
NBPF3-211ENST00000485941 GDF15Q99988 308 aa28.41■■■□□ 2.14
NBPF3-211ENST00000485941 NUDT12Q9BQG2 462 aa28.41■■■□□ 2.14
NBPF3-211ENST00000485941 STAP2Q9UGK3 403 aa28.41■■■□□ 2.14
NBPF3-211ENST00000485941 MYH1P12882 1939 aa28.41■■■□□ 2.14
NBPF3-211ENST00000485941 SOX1O00570 391 aaPredicted RBP28.4■■■□□ 2.14
NBPF3-211ENST00000485941 CNMDO75829 334 aa28.4■■■□□ 2.14
NBPF3-211ENST00000485941 MAPK4P31152 587 aa28.4■■■□□ 2.14
NBPF3-211ENST00000485941 TMED8Q6PL24 325 aaPredicted RBP28.4■■■□□ 2.14
NBPF3-211ENST00000485941 FTSJ3Q8IY81 847 aaKnown RBP28.4■■■□□ 2.14
NBPF3-211ENST00000485941 RIOK1Q9BRS2 568 aaKnown RBP28.4■■■□□ 2.14
NBPF3-211ENST00000485941 TRIM34Q9BYJ4 488 aa28.4■■■□□ 2.14
NBPF3-211ENST00000485941 GTF3C2Q8WUA4 911 aaPredicted RBP28.39■■■□□ 2.14
NBPF3-211ENST00000485941 NBPF3Q9H094 633 aa28.39■■■□□ 2.14
NBPF3-211ENST00000485941 SERPINB13Q9UIV8 391 aa28.39■■■□□ 2.14
NBPF3-211ENST00000485941 DDX60LQ5H9U9 1706 aaKnown RBP28.38■■■□□ 2.13
NBPF3-211ENST00000485941 PRKAR2AP13861 404 aaKnown RBP28.38■■■□□ 2.13
NBPF3-211ENST00000485941 GPR142Q7Z601 462 aa28.38■■■□□ 2.13
NBPF3-211ENST00000485941 BMP8BP34820 402 aa28.37■■■□□ 2.13
NBPF3-211ENST00000485941 CACNB2Q08289 660 aaPredicted RBP28.37■■■□□ 2.13
NBPF3-211ENST00000485941 LHX8Q68G74 356 aa28.37■■■□□ 2.13
NBPF3-211ENST00000485941 EXOC6BQ9Y2D4 811 aa28.37■■■□□ 2.13
NBPF3-211ENST00000485941 COL6A1P12109 1028 aa28.36■■■□□ 2.13
NBPF3-211ENST00000485941 GUCY1A2P33402 732 aa28.36■■■□□ 2.13
NBPF3-211ENST00000485941 SHMT1P34896 483 aa28.36■■■□□ 2.13
NBPF3-211ENST00000485941 PLCD1P51178 756 aa28.36■■■□□ 2.13
NBPF3-211ENST00000485941 GABPAQ06546 454 aa28.36■■■□□ 2.13
NBPF3-211ENST00000485941 CCL14Q16627 93 aa28.36■■■□□ 2.13
NBPF3-211ENST00000485941 CATSPERGQ6ZRH7 1159 aa28.36■■■□□ 2.13
NBPF3-211ENST00000485941 TRMT44Q8IYL2 757 aaKnown RBP28.36■■■□□ 2.13
NBPF3-211ENST00000485941 ACER1Q8TDN7 264 aa28.36■■■□□ 2.13
NBPF3-211ENST00000485941 KIAA1683Q9H0B3 1180 aa28.36■■■□□ 2.13
NBPF3-211ENST00000485941 RABGAP1Q9Y3P9 1069 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms