RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 BEGAINQ9BUH8 593 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 SWAP70Q9UH65 585 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 ZBTB21Q9ULJ3 1066 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 ZHX2Q9Y6X8 837 aa14.14□□□□□ -0.15
HPS4-214ENST00000485842 ROBO3Q96MS0 1386 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 CCL15-CCL14A0A0B4J2E2 113 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 MPHOSPH10O00566 681 aaKnown RBP14.13□□□□□ -0.15
HPS4-214ENST00000485842 GH2P01242 217 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 HSPA1AP0DMV8 641 aaKnown RBP14.13□□□□□ -0.15
HPS4-214ENST00000485842 HSPA1BP0DMV9 641 aaKnown RBP14.13□□□□□ -0.15
HPS4-214ENST00000485842 HSPD1P10809 573 aaKnown RBP14.13□□□□□ -0.15
HPS4-214ENST00000485842 CDK8P49336 464 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 JAG1P78504 1218 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 CCL15Q16663 113 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 ABCB5Q2M3G0 1257 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 TATDN1Q6P1N9 297 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 C16orf86Q6ZW13 317 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 RUFY2Q8WXA3 655 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 IL25Q9H293 177 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 RAD50Q92878 1312 aa14.13□□□□□ -0.15
HPS4-214ENST00000485842 USP17L5A8MUK1 530 aa14.12□□□□□ -0.15
HPS4-214ENST00000485842 ASNSP08243 561 aa14.12□□□□□ -0.15
HPS4-214ENST00000485842 GTF2A2P52657 109 aa14.12□□□□□ -0.15
HPS4-214ENST00000485842 PPARAQ07869 468 aa14.12□□□□□ -0.15
HPS4-214ENST00000485842 SNAPC2Q13487 334 aa14.12□□□□□ -0.15
HPS4-214ENST00000485842 CABP5Q9NP86 173 aa14.12□□□□□ -0.15
HPS4-214ENST00000485842 WBP1LQ9NX94 342 aa14.12□□□□□ -0.15
HPS4-214ENST00000485842 PTPRFP10586 1907 aa14.11□□□□□ -0.15
HPS4-214ENST00000485842 TRIM75PA6NK02 468 aa14.11□□□□□ -0.15
HPS4-214ENST00000485842 CETPP11597 493 aa14.11□□□□□ -0.15
HPS4-214ENST00000485842 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
HPS4-214ENST00000485842 RAB3GAP1Q15042 981 aa14.11□□□□□ -0.15
HPS4-214ENST00000485842 REM2Q8IYK8 340 aaPredicted RBP14.11□□□□□ -0.15
HPS4-214ENST00000485842 BRI3BPQ8WY22 251 aa14.11□□□□□ -0.15
HPS4-214ENST00000485842 AS3MTQ9HBK9 375 aa14.11□□□□□ -0.15
HPS4-214ENST00000485842 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
HPS4-214ENST00000485842 KCNH4Q9UQ05 1017 aa14.11□□□□□ -0.15
HPS4-214ENST00000485842 IGF2BP3O00425 579 aaKnown RBP eCLIP14.1□□□□□ -0.15
HPS4-214ENST00000485842 PRDM1O75626 825 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 FGAP02671 866 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 SLC3A2P08195 630 aaKnown RBP14.1□□□□□ -0.15
HPS4-214ENST00000485842 AKR1B1P15121 316 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 TM4SF4P48230 202 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 SPP2Q13103 211 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 ALX1Q15699 326 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 IFNL1Q8IU54 200 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 MS4A4AQ96JQ5 239 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 MKNK2Q9HBH9 465 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 GINM1Q9NU53 330 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 TSKSQ9UJT2 592 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 AFG3L2Q9Y4W6 797 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 LAMA4Q16363 1823 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 ZMYM6O95789 1325 aa14.1□□□□□ -0.15
HPS4-214ENST00000485842 CXCL11O14625 94 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 FOXN1O15353 648 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 SGSM2O43147 1006 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 CDC45O75419 566 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 TRPA1O75762 1119 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 INHBEP58166 350 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 HAND2P61296 217 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 PDE4BQ07343 736 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 SEPT2Q15019 361 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 GADL1Q6ZQY3 521 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 CLEC10AQ8IUN9 316 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 ZNF280CQ8ND82 737 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 FEZ1Q99689 392 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 DSCC1Q9BVC3 393 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 RNF186Q9NXI6 227 aa14.09□□□□□ -0.15
HPS4-214ENST00000485842 A0A0G2JLL6 359 aaPredicted RBP14.08□□□□□ -0.16
HPS4-214ENST00000485842 TESPA1A2RU30 521 aaPredicted RBP14.08□□□□□ -0.16
HPS4-214ENST00000485842 RASA1P20936 1047 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 GUCY1A2P33402 732 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 MTMR2Q13614 643 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 CASC1Q6TDU7 716 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 TMEM179Q6ZVK1 233 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 PRRT2Q7Z6L0 340 aaPredicted RBP14.08□□□□□ -0.16
HPS4-214ENST00000485842 PIAS4Q8N2W9 510 aaPredicted RBP14.08□□□□□ -0.16
HPS4-214ENST00000485842 CCDC17Q96LX7 622 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 PTPN18Q99952 460 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 TBC1D2Q9BYX2 928 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 ZNF287Q9HBT7 754 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 TOMM22Q9NS69 142 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 LOC285556D6RIA3 1793 aa14.08□□□□□ -0.16
HPS4-214ENST00000485842 BTBD19C9JJ37 291 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 CA12O43570 354 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 HMGCS2P54868 508 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 ICA1Q05084 483 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 DGKZQ13574 1117 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 ZYXQ15942 572 aaKnown RBP14.07□□□□□ -0.16
HPS4-214ENST00000485842 OTUD7BQ6GQQ9 843 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 FAM43AQ8N2R8 423 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 WDR18Q9BV38 432 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 INCENPQ9NQS7 918 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 ANAPC4Q9UJX5 808 aa14.07□□□□□ -0.16
HPS4-214ENST00000485842 GREB1LQ9C091 1923 aaPredicted RBP14.07□□□□□ -0.16
HPS4-214ENST00000485842 USP17L10C9JJH3 530 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 TBC1D8O95759 1140 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 ALDH1A1P00352 501 aa14.06□□□□□ -0.16
HPS4-214ENST00000485842 ATP2B2Q01814 1243 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms