RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 TMEM87BQ96K49 555 aa7.73□□□□□ -1.17
SRRM1-213ENST00000485441 SRPK1Q96SB4 655 aaKnown RBP7.73□□□□□ -1.17
SRRM1-213ENST00000485441 ATXN3LQ9H3M9 355 aa7.73□□□□□ -1.17
SRRM1-213ENST00000485441 PIK3R2O00459 728 aa7.72□□□□□ -1.17
SRRM1-213ENST00000485441 ALX3O95076 343 aa7.72□□□□□ -1.17
SRRM1-213ENST00000485441 COL8A1P27658 744 aa7.72□□□□□ -1.17
SRRM1-213ENST00000485441 CANXP27824 592 aaKnown RBP7.72□□□□□ -1.17
SRRM1-213ENST00000485441 PPP2R5EQ16537 467 aa7.72□□□□□ -1.17
SRRM1-213ENST00000485441 AGGF1Q8N302 714 aaeCLIP7.72□□□□□ -1.17
SRRM1-213ENST00000485441 BEND7Q8N7W2 519 aaPredicted RBP7.72□□□□□ -1.17
SRRM1-213ENST00000485441 C12orf50Q8NA57 414 aaPredicted RBP7.72□□□□□ -1.17
SRRM1-213ENST00000485441 ADAMTS8Q9UP79 889 aa7.72□□□□□ -1.17
SRRM1-213ENST00000485441 TMA7Q9Y2S6 64 aaKnown RBP7.72□□□□□ -1.17
SRRM1-213ENST00000485441 GJB6O95452 261 aa7.71□□□□□ -1.18
SRRM1-213ENST00000485441 RASGRF1Q13972 1273 aa7.71□□□□□ -1.18
SRRM1-213ENST00000485441 ANKRD34AQ69YU3 496 aa7.71□□□□□ -1.18
SRRM1-213ENST00000485441 SDE2Q6IQ49 451 aa7.71□□□□□ -1.18
SRRM1-213ENST00000485441 LILRB2Q8N423 598 aa7.71□□□□□ -1.18
SRRM1-213ENST00000485441 ISL2Q96A47 359 aa7.71□□□□□ -1.18
SRRM1-213ENST00000485441 RNPC3Q96LT9 517 aaKnown RBP7.71□□□□□ -1.18
SRRM1-213ENST00000485441 FAM105AQ9NUU6 356 aa7.71□□□□□ -1.18
SRRM1-213ENST00000485441 NOP53Q9NZM5 478 aaKnown RBP7.71□□□□□ -1.18
SRRM1-213ENST00000485441 ACTL7BQ9Y614 415 aa7.71□□□□□ -1.18
SRRM1-213ENST00000485441 RGS13O14921 159 aa7.7□□□□□ -1.18
SRRM1-213ENST00000485441 PDPK1O15530 556 aa7.7□□□□□ -1.18
SRRM1-213ENST00000485441 HCLS1P14317 486 aaPredicted RBP7.7□□□□□ -1.18
SRRM1-213ENST00000485441 PRRT3Q5FWE3 981 aa7.7□□□□□ -1.18
SRRM1-213ENST00000485441 EGFLAMQ63HQ2 1017 aa7.7□□□□□ -1.18
SRRM1-213ENST00000485441 MRM1Q6IN84 353 aaKnown RBP7.7□□□□□ -1.18
SRRM1-213ENST00000485441 DYMQ7RTS9 669 aa7.7□□□□□ -1.18
SRRM1-213ENST00000485441 KLHL3Q9UH77 587 aa7.7□□□□□ -1.18
SRRM1-213ENST00000485441 AP4E1Q9UPM8 1137 aa7.7□□□□□ -1.18
SRRM1-213ENST00000485441 MAPK8IP1Q9UQF2 711 aa7.7□□□□□ -1.18
SRRM1-213ENST00000485441 SLC12A7Q9Y666 1083 aa7.7□□□□□ -1.18
SRRM1-213ENST00000485441 MRPL42Q9Y6G3 142 aaKnown RBP7.7□□□□□ -1.18
SRRM1-213ENST00000485441 UBOX5O94941 541 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 CST3P01034 146 aaPredicted RBP7.69□□□□□ -1.18
SRRM1-213ENST00000485441 SPATA31C1P0DKV0 1188 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 CCNFP41002 786 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 ASPAP45381 313 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 LARP1BQ659C4 914 aaKnown RBP7.69□□□□□ -1.18
SRRM1-213ENST00000485441 C6orf15Q6UXA7 325 aaPredicted RBP7.69□□□□□ -1.18
SRRM1-213ENST00000485441 FAM178BQ8IXR5 827 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 JMYQ8N9B5 988 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 KCT2Q8NC54 265 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 FAM13CQ8NE31 585 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 KLHL6Q8WZ60 621 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 UBL7Q96S82 380 aaPredicted RBP7.69□□□□□ -1.18
SRRM1-213ENST00000485441 DNAJC7Q99615 494 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 ACSS3Q9H6R3 686 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 AKTIPQ9H8T0 292 aa7.69□□□□□ -1.18
SRRM1-213ENST00000485441 ZNF214Q9UL59 606 aaPredicted RBP7.69□□□□□ -1.18
SRRM1-213ENST00000485441 COL17A1Q9UMD9 1497 aaPredicted RBP7.68□□□□□ -1.18
SRRM1-213ENST00000485441 B2RBV5 119 aa7.68□□□□□ -1.18
SRRM1-213ENST00000485441 POLR2BP30876 1174 aaKnown RBP7.68□□□□□ -1.18
SRRM1-213ENST00000485441 PREPP48147 710 aa7.68□□□□□ -1.18
SRRM1-213ENST00000485441 YARSP54577 528 aaKnown RBP7.68□□□□□ -1.18
SRRM1-213ENST00000485441 ZNF662Q6ZS27 426 aa7.68□□□□□ -1.18
SRRM1-213ENST00000485441 TMEM192Q8IY95 271 aa7.68□□□□□ -1.18
SRRM1-213ENST00000485441 SMYD4Q8IYR2 804 aaPredicted RBP7.68□□□□□ -1.18
SRRM1-213ENST00000485441 PPP1R13LQ8WUF5 828 aa7.68□□□□□ -1.18
SRRM1-213ENST00000485441 FAM46AQ96IP4 442 aaKnown RBP7.68□□□□□ -1.18
SRRM1-213ENST00000485441 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
SRRM1-213ENST00000485441 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.67□□□□□ -1.18
SRRM1-213ENST00000485441 DDAH1O94760 285 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 RAG1P15918 1043 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 NOS3P29474 1203 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 TCEAL1Q15170 157 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 FDX2Q6P4F2 183 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 CCDC74BQ96LY2 380 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 KIF2CQ99661 725 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 PHAXQ9H814 394 aaKnown RBP7.67□□□□□ -1.18
SRRM1-213ENST00000485441 KANSL2Q9H9L4 492 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 PICK1Q9NRD5 415 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 PCOLCE2Q9UKZ9 415 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 PCDHB10Q9UN67 800 aa7.67□□□□□ -1.18
SRRM1-213ENST00000485441 CCDC85CA6NKD9 419 aa7.66□□□□□ -1.18
SRRM1-213ENST00000485441 C9orf172C9J069 976 aa7.66□□□□□ -1.18
SRRM1-213ENST00000485441 PRAMEF13Q5VWM6 474 aa7.66□□□□□ -1.18
SRRM1-213ENST00000485441 CDPF1Q6NVV7 123 aa7.66□□□□□ -1.18
SRRM1-213ENST00000485441 SEZ6L2Q6UXD5 910 aa7.66□□□□□ -1.18
SRRM1-213ENST00000485441 CDC37L1Q7L3B6 337 aa7.66□□□□□ -1.18
SRRM1-213ENST00000485441 BAHD1Q8TBE0 780 aaPredicted RBP7.66□□□□□ -1.18
SRRM1-213ENST00000485441 WFDC12Q8WWY7 111 aa7.66□□□□□ -1.18
SRRM1-213ENST00000485441 EZH1Q92800 747 aaPredicted RBP7.66□□□□□ -1.18
SRRM1-213ENST00000485441 ZNF669Q96BR6 464 aaPredicted RBP7.66□□□□□ -1.18
SRRM1-213ENST00000485441 VWCEQ96DN2 955 aa7.66□□□□□ -1.18
SRRM1-213ENST00000485441 KRBA1A5PL33 1030 aa7.65□□□□□ -1.18
SRRM1-213ENST00000485441 ENPP3O14638 875 aa7.65□□□□□ -1.18
SRRM1-213ENST00000485441 RNGTTO60942 597 aaKnown RBP7.65□□□□□ -1.18
SRRM1-213ENST00000485441 LRIG2O94898 1065 aa7.65□□□□□ -1.18
SRRM1-213ENST00000485441 ADGRE1Q14246 886 aa7.65□□□□□ -1.18
SRRM1-213ENST00000485441 NCAPHQ15003 741 aa7.65□□□□□ -1.18
SRRM1-213ENST00000485441 VHLLQ6RSH7 139 aa7.65□□□□□ -1.18
SRRM1-213ENST00000485441 PODNQ7Z5L7 613 aa7.65□□□□□ -1.18
SRRM1-213ENST00000485441 DZIP1LQ8IYY4 767 aaKnown RBP7.65□□□□□ -1.18
SRRM1-213ENST00000485441 ST13P5Q8NFI4 369 aaPredicted RBP7.65□□□□□ -1.18
SRRM1-213ENST00000485441 CYB5D2Q8WUJ1 264 aa7.65□□□□□ -1.18
SRRM1-213ENST00000485441 DPH2Q9BQC3 489 aaPredicted RBP7.65□□□□□ -1.18
SRRM1-213ENST00000485441 FOXQ1Q9C009 403 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms