RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 FLT1P17948 1338 aa12.07□□□□□ -0.48
TMEM40-208ENST00000485124 H0YGN5 161 aa12.06□□□□□ -0.48
TMEM40-208ENST00000485124 INHAP05111 366 aa12.06□□□□□ -0.48
TMEM40-208ENST00000485124 PDE4AP27815 886 aa12.06□□□□□ -0.48
TMEM40-208ENST00000485124 HMGCS2P54868 508 aa12.06□□□□□ -0.48
TMEM40-208ENST00000485124 BACE1P56817 501 aa12.06□□□□□ -0.48
TMEM40-208ENST00000485124 AAMPQ13685 434 aa12.06□□□□□ -0.48
TMEM40-208ENST00000485124 GTF3C2Q8WUA4 911 aaPredicted RBP12.06□□□□□ -0.48
TMEM40-208ENST00000485124 CRISPLD2Q9H0B8 497 aa12.06□□□□□ -0.48
TMEM40-208ENST00000485124 ASCC2Q9H1I8 757 aaPredicted RBP12.06□□□□□ -0.48
TMEM40-208ENST00000485124 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.06□□□□□ -0.48
TMEM40-208ENST00000485124 DBNLQ9UJU6 430 aaKnown RBP12.06□□□□□ -0.48
TMEM40-208ENST00000485124 COLQQ9Y215 455 aaPredicted RBP12.06□□□□□ -0.48
TMEM40-208ENST00000485124 COG6Q9Y2V7 657 aa12.06□□□□□ -0.48
TMEM40-208ENST00000485124 PLXNB2O15031 1838 aa12.06□□□□□ -0.48
TMEM40-208ENST00000485124 SZT2Q5T011 3432 aa12.05□□□□□ -0.48
TMEM40-208ENST00000485124 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
TMEM40-208ENST00000485124 FARP2O94887 1054 aaPredicted RBP12.05□□□□□ -0.48
TMEM40-208ENST00000485124 HLA-DOAP06340 250 aa12.05□□□□□ -0.48
TMEM40-208ENST00000485124 RRP1BQ14684 758 aaKnown RBP12.05□□□□□ -0.48
TMEM40-208ENST00000485124 CCDC84Q86UT8 332 aaPredicted RBP12.05□□□□□ -0.48
TMEM40-208ENST00000485124 ERC1Q8IUD2 1116 aa12.05□□□□□ -0.48
TMEM40-208ENST00000485124 ANKLE1Q8NAG6 615 aa12.05□□□□□ -0.48
TMEM40-208ENST00000485124 UNC93B1Q9H1C4 597 aa12.05□□□□□ -0.48
TMEM40-208ENST00000485124 SNRKQ9NRH2 765 aa12.05□□□□□ -0.48
TMEM40-208ENST00000485124 NR2E3Q9Y5X4 410 aa12.05□□□□□ -0.48
TMEM40-208ENST00000485124 DDX60LQ5H9U9 1706 aaKnown RBP12.04□□□□□ -0.48
TMEM40-208ENST00000485124 USP17L10C9JJH3 530 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 HMGCRP04035 888 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 ELNP15502 786 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 ZAP70P43403 619 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 ADGRA1Q86SQ6 560 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 MAPKAPK5Q8IW41 473 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 CRACR2BQ8N4Y2 399 aaPredicted RBP12.04□□□□□ -0.48
TMEM40-208ENST00000485124 TGFBRAP1Q8WUH2 860 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 DPF3Q92784 378 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 TRIM34Q9BYJ4 488 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 EHD4Q9H223 541 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 DNAJC18Q9H819 358 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
TMEM40-208ENST00000485124 A0A1W2PPC1 479 aa12.03□□□□□ -0.48
TMEM40-208ENST00000485124 XRCC5P13010 732 aaKnown RBP12.03□□□□□ -0.48
TMEM40-208ENST00000485124 IRX3P78415 501 aaPredicted RBP12.03□□□□□ -0.48
TMEM40-208ENST00000485124 MTMR2Q13614 643 aa12.03□□□□□ -0.48
TMEM40-208ENST00000485124 HSP90AB4PQ58FF6 505 aa12.03□□□□□ -0.48
TMEM40-208ENST00000485124 TATDN1Q6P1N9 297 aa12.03□□□□□ -0.48
TMEM40-208ENST00000485124 CEP85Q6P2H3 762 aa12.03□□□□□ -0.48
TMEM40-208ENST00000485124 ITPRIPQ8IWB1 547 aa12.03□□□□□ -0.48
TMEM40-208ENST00000485124 TRMT44Q8IYL2 757 aaKnown RBP12.03□□□□□ -0.48
TMEM40-208ENST00000485124 SOCS4Q8WXH5 440 aa12.03□□□□□ -0.48
TMEM40-208ENST00000485124 EAF2Q96CJ1 260 aaPredicted RBP12.03□□□□□ -0.48
TMEM40-208ENST00000485124 PIH1D3Q9NQM4 214 aaKnown RBP12.03□□□□□ -0.48
TMEM40-208ENST00000485124 GJD2Q9UKL4 321 aa12.03□□□□□ -0.48
TMEM40-208ENST00000485124 TAOK2Q9UL54 1235 aa12.03□□□□□ -0.48
TMEM40-208ENST00000485124 ZBTB21Q9ULJ3 1066 aa12.03□□□□□ -0.48
TMEM40-208ENST00000485124 IGHDP01880 384 aa12.02□□□□□ -0.49
TMEM40-208ENST00000485124 HERVK_113P62684 666 aa12.02□□□□□ -0.49
TMEM40-208ENST00000485124 MAP3K12Q12852 859 aa12.02□□□□□ -0.49
TMEM40-208ENST00000485124 C12orf42Q96LP6 360 aa12.02□□□□□ -0.49
TMEM40-208ENST00000485124 DEFB118Q96PH6 123 aa12.02□□□□□ -0.49
TMEM40-208ENST00000485124 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.02□□□□□ -0.49
TMEM40-208ENST00000485124 PRO3102Q9H379 93 aa12.02□□□□□ -0.49
TMEM40-208ENST00000485124 SERPINB13Q9UIV8 391 aa12.02□□□□□ -0.49
TMEM40-208ENST00000485124 PALD1Q9ULE6 856 aa12.02□□□□□ -0.49
TMEM40-208ENST00000485124 RPTORQ8N122 1335 aa12.02□□□□□ -0.49
TMEM40-208ENST00000485124 ALPK3Q96L96 1907 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 IDH1O75874 414 aaKnown RBP12.01□□□□□ -0.49
TMEM40-208ENST00000485124 TFRCP02786 760 aaKnown RBP12.01□□□□□ -0.49
TMEM40-208ENST00000485124 CYP7A1P22680 504 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 MAPK4P31152 587 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 ANP32AP39687 249 aaKnown RBP12.01□□□□□ -0.49
TMEM40-208ENST00000485124 TTF1Q15361 905 aaPredicted RBP12.01□□□□□ -0.49
TMEM40-208ENST00000485124 MAP3K21Q5TCX8 1036 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 USP17L2Q6R6M4 530 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 CHRDL2Q6WN34 429 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 NECAB2Q7Z6G3 386 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 TTC6Q86TZ1 520 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 GPRC5AQ8NFJ5 357 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.01□□□□□ -0.49
TMEM40-208ENST00000485124 CCDC8Q9H0W5 538 aaPredicted RBP12.01□□□□□ -0.49
TMEM40-208ENST00000485124 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 HMX1Q9NP08 348 aaPredicted RBP12.01□□□□□ -0.49
TMEM40-208ENST00000485124 TLR7Q9NYK1 1049 aaKnown RBP12.01□□□□□ -0.49
TMEM40-208ENST00000485124 LAMA3Q16787 3333 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 NAV1Q8NEY1 1877 aa12.01□□□□□ -0.49
TMEM40-208ENST00000485124 USP14P54578 494 aa12□□□□□ -0.49
TMEM40-208ENST00000485124 JAG1P78504 1218 aa12□□□□□ -0.49
TMEM40-208ENST00000485124 MAGEB6Q8N7X4 407 aa12□□□□□ -0.49
TMEM40-208ENST00000485124 P2RX7Q99572 595 aaKnown RBP12□□□□□ -0.49
TMEM40-208ENST00000485124 NUDT12Q9BQG2 462 aa12□□□□□ -0.49
TMEM40-208ENST00000485124 PCDHB15Q9Y5E8 787 aa12□□□□□ -0.49
TMEM40-208ENST00000485124 EVI5O60447 810 aa11.99□□□□□ -0.49
TMEM40-208ENST00000485124 GDF11O95390 407 aa11.99□□□□□ -0.49
TMEM40-208ENST00000485124 USP5P45974 858 aa11.99□□□□□ -0.49
TMEM40-208ENST00000485124 ERVK-9P63128 1117 aa11.99□□□□□ -0.49
TMEM40-208ENST00000485124 ERVK-24P63145 666 aa11.99□□□□□ -0.49
TMEM40-208ENST00000485124 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
TMEM40-208ENST00000485124 C8orf34Q49A92 452 aa11.99□□□□□ -0.49
TMEM40-208ENST00000485124 LBX2Q6XYB7 198 aa11.99□□□□□ -0.49
TMEM40-208ENST00000485124 RPAP2Q8IXW5 612 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms