RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ARMCX6Q7L4S7 300 aa10.67□□□□□ -0.7
UBR3-210ENST00000484596 ZNF654Q8IZM8 581 aa10.67□□□□□ -0.7
UBR3-210ENST00000484596 FBRSQ9HAH7 460 aa10.67□□□□□ -0.7
UBR3-210ENST00000484596 GTF2IRD1Q9UHL9 959 aa10.67□□□□□ -0.7
UBR3-210ENST00000484596 RNF114Q9Y508 228 aa10.67□□□□□ -0.7
UBR3-210ENST00000484596 SNCAIPQ9Y6H5 919 aa10.67□□□□□ -0.7
UBR3-210ENST00000484596 SEPT6Q14141 434 aa10.66□□□□□ -0.7
UBR3-210ENST00000484596 AOC3Q16853 763 aa10.66□□□□□ -0.7
UBR3-210ENST00000484596 WIPI1Q5MNZ9 446 aaPredicted RBP10.66□□□□□ -0.7
UBR3-210ENST00000484596 WNT10AQ9GZT5 417 aa10.66□□□□□ -0.7
UBR3-210ENST00000484596 KBTBD4Q9NVX7 518 aa10.66□□□□□ -0.7
UBR3-210ENST00000484596 DDX41Q9UJV9 622 aaKnown RBP10.66□□□□□ -0.7
UBR3-210ENST00000484596 TMEM265A0A087WTH1 108 aa10.65□□□□□ -0.7
UBR3-210ENST00000484596 IGF2BP3O00425 579 aaKnown RBP eCLIP10.65□□□□□ -0.7
UBR3-210ENST00000484596 LRIG2O94898 1065 aa10.65□□□□□ -0.7
UBR3-210ENST00000484596 EOMESO95936 686 aa10.65□□□□□ -0.7
UBR3-210ENST00000484596 PHC3Q8NDX5 983 aa10.65□□□□□ -0.7
UBR3-210ENST00000484596 HRASLS5Q96KN8 279 aa10.65□□□□□ -0.7
UBR3-210ENST00000484596 TNKS2Q9H2K2 1166 aa10.65□□□□□ -0.7
UBR3-210ENST00000484596 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.65□□□□□ -0.7
UBR3-210ENST00000484596 TXKP42681 527 aa10.64□□□□□ -0.71
UBR3-210ENST00000484596 ETF1P62495 437 aaKnown RBP10.64□□□□□ -0.71
UBR3-210ENST00000484596 SLBPQ14493 270 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBR3-210ENST00000484596 NKG7Q16617 165 aa10.64□□□□□ -0.71
UBR3-210ENST00000484596 ZNF792Q3KQV3 632 aa10.64□□□□□ -0.71
UBR3-210ENST00000484596 CCSER2Q9H7U1 834 aa10.64□□□□□ -0.71
UBR3-210ENST00000484596 SLITRK5O94991 958 aa10.63□□□□□ -0.71
UBR3-210ENST00000484596 FUT4P22083 530 aa10.63□□□□□ -0.71
UBR3-210ENST00000484596 LMNB2Q03252 620 aa10.63□□□□□ -0.71
UBR3-210ENST00000484596 ZNF394Q53GI3 561 aa10.63□□□□□ -0.71
UBR3-210ENST00000484596 CCDC84Q86UT8 332 aaPredicted RBP10.63□□□□□ -0.71
UBR3-210ENST00000484596 COPRSQ9NQ92 184 aa10.63□□□□□ -0.71
UBR3-210ENST00000484596 MINDY4BA8MYZ0 360 aa10.62□□□□□ -0.71
UBR3-210ENST00000484596 GFRA2O00451 464 aa10.62□□□□□ -0.71
UBR3-210ENST00000484596 ITGB5P18084 799 aa10.62□□□□□ -0.71
UBR3-210ENST00000484596 EIF4A3P38919 411 aaKnown RBP10.62□□□□□ -0.71
UBR3-210ENST00000484596 RAD51AP2Q09MP3 1159 aa10.62□□□□□ -0.71
UBR3-210ENST00000484596 RHOVQ96L33 236 aa10.62□□□□□ -0.71
UBR3-210ENST00000484596 FOXQ1Q9C009 403 aa10.62□□□□□ -0.71
UBR3-210ENST00000484596 MIR1-1HGQ9H1L0 117 aa10.62□□□□□ -0.71
UBR3-210ENST00000484596 TLR6Q9Y2C9 796 aa10.62□□□□□ -0.71
UBR3-210ENST00000484596 SNX11Q9Y5W9 270 aa10.62□□□□□ -0.71
UBR3-210ENST00000484596 TFE3P19532 575 aaPredicted RBP10.61□□□□□ -0.71
UBR3-210ENST00000484596 GRK4P32298 578 aa10.61□□□□□ -0.71
UBR3-210ENST00000484596 NKPD1Q17RQ9 610 aa10.61□□□□□ -0.71
UBR3-210ENST00000484596 SPACA3Q8IXA5 215 aa10.61□□□□□ -0.71
UBR3-210ENST00000484596 PRDM5Q9NQX1 630 aaPredicted RBP10.61□□□□□ -0.71
UBR3-210ENST00000484596 CAP2P40123 477 aa10.6□□□□□ -0.71
UBR3-210ENST00000484596 ZC3H6P61129 1189 aaKnown RBP10.6□□□□□ -0.71
UBR3-210ENST00000484596 RACK1P63244 317 aaKnown RBP10.6□□□□□ -0.71
UBR3-210ENST00000484596 CAMK2GQ13555 558 aaPredicted RBP10.6□□□□□ -0.71
UBR3-210ENST00000484596 HID1Q8IV36 788 aa10.6□□□□□ -0.71
UBR3-210ENST00000484596 GOLGA2P5Q9HBQ8 144 aa10.6□□□□□ -0.71
UBR3-210ENST00000484596 SUPT16HQ9Y5B9 1047 aaKnown RBP10.6□□□□□ -0.71
UBR3-210ENST00000484596 PCDHGB7Q9Y5F8 929 aa10.6□□□□□ -0.71
UBR3-210ENST00000484596 CNTNAP4Q9C0A0 1308 aa10.59□□□□□ -0.71
UBR3-210ENST00000484596 PF4P02776 101 aa10.59□□□□□ -0.71
UBR3-210ENST00000484596 JUNBP17275 347 aaPredicted RBP10.59□□□□□ -0.71
UBR3-210ENST00000484596 GNL2Q13823 731 aaKnown RBP10.59□□□□□ -0.71
UBR3-210ENST00000484596 KRTAP19-1Q8IUB9 90 aa10.59□□□□□ -0.71
UBR3-210ENST00000484596 KIAA0825Q8IV33 1275 aa10.59□□□□□ -0.71
UBR3-210ENST00000484596 C8orf37Q96NL8 207 aa10.59□□□□□ -0.71
UBR3-210ENST00000484596 MIPEPQ99797 713 aa10.59□□□□□ -0.71
UBR3-210ENST00000484596 SPON2Q9BUD6 331 aa10.59□□□□□ -0.71
UBR3-210ENST00000484596 KCNQ5Q9NR82 932 aa10.59□□□□□ -0.71
UBR3-210ENST00000484596 MBNL3Q9NUK0 354 aaKnown RBP10.59□□□□□ -0.71
UBR3-210ENST00000484596 ADAMTS6Q9UKP5 1117 aa10.59□□□□□ -0.71
UBR3-210ENST00000484596 MAPK8IP1Q9UQF2 711 aa10.59□□□□□ -0.71
UBR3-210ENST00000484596 ROBO2Q9HCK4 1378 aa10.58□□□□□ -0.72
UBR3-210ENST00000484596 GNAT3A8MTJ3 354 aa10.58□□□□□ -0.72
UBR3-210ENST00000484596 RNASE1P07998 156 aaKnown RBP10.58□□□□□ -0.72
UBR3-210ENST00000484596 SNAP47Q5SQN1 464 aa10.58□□□□□ -0.72
UBR3-210ENST00000484596 MFSD2AQ8NA29 543 aa10.58□□□□□ -0.72
UBR3-210ENST00000484596 RIN3Q8TB24 985 aa10.58□□□□□ -0.72
UBR3-210ENST00000484596 PI4K2BQ8TCG2 481 aa10.58□□□□□ -0.72
UBR3-210ENST00000484596 ASIC4Q96FT7 647 aa10.58□□□□□ -0.72
UBR3-210ENST00000484596 F6X3S4 739 aa10.57□□□□□ -0.72
UBR3-210ENST00000484596 ANGEL2Q5VTE6 544 aaKnown RBP10.57□□□□□ -0.72
UBR3-210ENST00000484596 PRAMEF13Q5VWM6 474 aa10.57□□□□□ -0.72
UBR3-210ENST00000484596 ZNF296Q8WUU4 475 aaPredicted RBP10.57□□□□□ -0.72
UBR3-210ENST00000484596 ASB11Q8WXH4 323 aa10.57□□□□□ -0.72
UBR3-210ENST00000484596 JARID2Q92833 1246 aaPredicted RBP10.57□□□□□ -0.72
UBR3-210ENST00000484596 SPATA32Q96LK8 384 aa10.57□□□□□ -0.72
UBR3-210ENST00000484596 TPX2Q9ULW0 747 aaKnown RBP10.57□□□□□ -0.72
UBR3-210ENST00000484596 TACC3Q9Y6A5 838 aa10.57□□□□□ -0.72
UBR3-210ENST00000484596 PAPLNO95428 1278 aa10.56□□□□□ -0.72
UBR3-210ENST00000484596 CST3P01034 146 aaPredicted RBP10.56□□□□□ -0.72
UBR3-210ENST00000484596 GOLM1Q8NBJ4 401 aa10.56□□□□□ -0.72
UBR3-210ENST00000484596 XAGE3Q8WTP9 111 aa10.56□□□□□ -0.72
UBR3-210ENST00000484596 RC3H2Q9HBD1 1191 aaKnown RBP10.56□□□□□ -0.72
UBR3-210ENST00000484596 PRR33A8MZF0 331 aa10.55□□□□□ -0.72
UBR3-210ENST00000484596 FAM160A1Q05DH4 1040 aa10.55□□□□□ -0.72
UBR3-210ENST00000484596 LETMD1Q6P1Q0 360 aa10.55□□□□□ -0.72
UBR3-210ENST00000484596 FBXL19Q6PCT2 694 aa10.55□□□□□ -0.72
UBR3-210ENST00000484596 GATAD2BQ8WXI9 593 aa10.55□□□□□ -0.72
UBR3-210ENST00000484596 NT5C1AQ9BXI3 368 aa10.55□□□□□ -0.72
UBR3-210ENST00000484596 ACBD3Q9H3P7 528 aa10.55□□□□□ -0.72
UBR3-210ENST00000484596 ADAMTS1Q9UHI8 967 aa10.55□□□□□ -0.72
UBR3-210ENST00000484596 INPP5FQ9Y2H2 1132 aa10.55□□□□□ -0.72
UBR3-210ENST00000484596 GREM1O60565 184 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms