RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 LACTBP83111 547 aaPredicted RBP15.57■□□□□ 0.08
HDAC1-209ENST00000484305 TREML2Q5T2D2 321 aa15.57■□□□□ 0.08
HDAC1-209ENST00000484305 KBTBD3Q8NAB2 608 aa15.57■□□□□ 0.08
HDAC1-209ENST00000484305 EXOC6Q8TAG9 804 aa15.57■□□□□ 0.08
HDAC1-209ENST00000484305 PI4K2BQ8TCG2 481 aa15.57■□□□□ 0.08
HDAC1-209ENST00000484305 PARK7Q99497 189 aaKnown RBP15.57■□□□□ 0.08
HDAC1-209ENST00000484305 PUS7LQ9H0K6 701 aaKnown RBP15.57■□□□□ 0.08
HDAC1-209ENST00000484305 AS3MTQ9HBK9 375 aa15.57■□□□□ 0.08
HDAC1-209ENST00000484305 ZBTB21Q9ULJ3 1066 aa15.57■□□□□ 0.08
HDAC1-209ENST00000484305 SLC45A1Q9Y2W3 748 aa15.57■□□□□ 0.08
HDAC1-209ENST00000484305 TTC41PQ6P2S7 1318 aa15.57■□□□□ 0.08
HDAC1-209ENST00000484305 ECM2O94769 699 aaPredicted RBP15.56■□□□□ 0.08
HDAC1-209ENST00000484305 AAMPQ13685 434 aa15.56■□□□□ 0.08
HDAC1-209ENST00000484305 ANKRD45Q5TZF3 282 aa15.56■□□□□ 0.08
HDAC1-209ENST00000484305 PROCA1Q8NCQ7 364 aaPredicted RBP15.56■□□□□ 0.08
HDAC1-209ENST00000484305 GCC1Q96CN9 775 aa15.56■□□□□ 0.08
HDAC1-209ENST00000484305 WDR18Q9BV38 432 aa15.56■□□□□ 0.08
HDAC1-209ENST00000484305 GINM1Q9NU53 330 aa15.56■□□□□ 0.08
HDAC1-209ENST00000484305 AGTPBP1Q9UPW5 1226 aa15.56■□□□□ 0.08
HDAC1-209ENST00000484305 SUPT16HQ9Y5B9 1047 aaKnown RBP15.56■□□□□ 0.08
HDAC1-209ENST00000484305 MYH8P13535 1937 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 MGAMO43451 1857 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 SALL3Q9BXA9 1300 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 GH2P01242 217 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 CYP2D6P10635 497 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 BCRP11274 1271 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 MX1P20591 662 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 CTGFP29279 349 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 SHMT1P34896 483 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 GABPAQ06546 454 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 MTMR2Q13614 643 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 KIF22Q14807 665 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 SH3D19Q5HYK7 790 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 ATP8A2Q9NTI2 1148 aa15.55■□□□□ 0.08
HDAC1-209ENST00000484305 ERC2O15083 957 aa15.54■□□□□ 0.08
HDAC1-209ENST00000484305 SOX10P56693 466 aa15.54■□□□□ 0.08
HDAC1-209ENST00000484305 BACE1P56817 501 aa15.54■□□□□ 0.08
HDAC1-209ENST00000484305 ARHGEF6Q15052 776 aa15.54■□□□□ 0.08
HDAC1-209ENST00000484305 CERKLQ49MI3 558 aaPredicted RBP15.54■□□□□ 0.08
HDAC1-209ENST00000484305 SLC4A4Q9Y6R1 1079 aa15.54■□□□□ 0.08
HDAC1-209ENST00000484305 HTTP42858 3142 aa15.54■□□□□ 0.08
HDAC1-209ENST00000484305 CYP2D7A0A087X1C5 515 aa15.53■□□□□ 0.08
HDAC1-209ENST00000484305 USP17L10C9JJH3 530 aa15.53■□□□□ 0.08
HDAC1-209ENST00000484305 SMIM22K7EJ46 135 aa15.53■□□□□ 0.08
HDAC1-209ENST00000484305 RNF113AO15541 343 aaKnown RBP15.53■□□□□ 0.08
HDAC1-209ENST00000484305 GLRX3O76003 335 aaKnown RBP15.53■□□□□ 0.08
HDAC1-209ENST00000484305 RGS19P49795 217 aa15.53■□□□□ 0.08
HDAC1-209ENST00000484305 ABCB5Q2M3G0 1257 aa15.53■□□□□ 0.08
HDAC1-209ENST00000484305 SMCR8Q8TEV9 937 aaPredicted RBP15.53■□□□□ 0.08
HDAC1-209ENST00000484305 OSBP2Q969R2 916 aa15.53■□□□□ 0.08
HDAC1-209ENST00000484305 DYNLL2Q96FJ2 89 aa15.53■□□□□ 0.08
HDAC1-209ENST00000484305 TRIM47Q96LD4 638 aa15.53■□□□□ 0.08
HDAC1-209ENST00000484305 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
HDAC1-209ENST00000484305 C19orf81C9J6K1 198 aa15.52■□□□□ 0.08
HDAC1-209ENST00000484305 USP17L12C9JPN9 530 aa15.52■□□□□ 0.08
HDAC1-209ENST00000484305 USP17L21D6R901 530 aa15.52■□□□□ 0.08
HDAC1-209ENST00000484305 IGHDP01880 384 aa15.52■□□□□ 0.08
HDAC1-209ENST00000484305 PSMC4P43686 418 aa15.52■□□□□ 0.08
HDAC1-209ENST00000484305 RAB3GAP1Q15042 981 aa15.52■□□□□ 0.08
HDAC1-209ENST00000484305 SLC44A5Q8NCS7 719 aa15.52■□□□□ 0.08
HDAC1-209ENST00000484305 APPBP2Q92624 585 aa15.52■□□□□ 0.08
HDAC1-209ENST00000484305 STRBPQ96SI9 672 aaKnown RBP15.52■□□□□ 0.08
HDAC1-209ENST00000484305 RWDD1Q9H446 243 aaPredicted RBP15.52■□□□□ 0.08
HDAC1-209ENST00000484305 PTCH2Q9Y6C5 1203 aa15.52■□□□□ 0.08
HDAC1-209ENST00000484305 GNRH1P01148 92 aa15.51■□□□□ 0.07
HDAC1-209ENST00000484305 ZFYP08048 801 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-209ENST00000484305 GUCY1A2P33402 732 aa15.51■□□□□ 0.07
HDAC1-209ENST00000484305 C12orf60Q5U649 245 aa15.51■□□□□ 0.07
HDAC1-209ENST00000484305 SMC5Q8IY18 1101 aa15.51■□□□□ 0.07
HDAC1-209ENST00000484305 ASCC2Q9H1I8 757 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-209ENST00000484305 CABP5Q9NP86 173 aa15.51■□□□□ 0.07
HDAC1-209ENST00000484305 EMILIN3Q9NT22 766 aa15.51■□□□□ 0.07
HDAC1-209ENST00000484305 TMOD4Q9NZQ9 345 aa15.51■□□□□ 0.07
HDAC1-209ENST00000484305 STAP2Q9UGK3 403 aa15.51■□□□□ 0.07
HDAC1-209ENST00000484305 PNMA3Q9UL41 463 aa15.51■□□□□ 0.07
HDAC1-209ENST00000484305 DOCK3Q8IZD9 2030 aa15.51■□□□□ 0.07
HDAC1-209ENST00000484305 GSG1L2A8MUP6 293 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 M0R2C6 588 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 FMNL1O95466 1100 aaPredicted RBP15.5■□□□□ 0.07
HDAC1-209ENST00000484305 OSBPP22059 807 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 PDE1AP54750 535 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 PABPC4Q13310 644 aaKnown RBP eCLIP15.5■□□□□ 0.07
HDAC1-209ENST00000484305 SEPT2Q15019 361 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 ZYXQ15942 572 aaKnown RBP15.5■□□□□ 0.07
HDAC1-209ENST00000484305 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 CTR9Q6PD62 1173 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 ANKRD13CQ8N6S4 541 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 FSD1Q9BTV5 496 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 SWAP70Q9UH65 585 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 CENPFP49454 3210 aa15.5■□□□□ 0.07
HDAC1-209ENST00000484305 MPHOSPH10O00566 681 aaKnown RBP15.49■□□□□ 0.07
HDAC1-209ENST00000484305 GPAA1O43292 621 aa15.49■□□□□ 0.07
HDAC1-209ENST00000484305 HOXA7P31268 230 aaPredicted RBP15.49■□□□□ 0.07
HDAC1-209ENST00000484305 CDK8P49336 464 aa15.49■□□□□ 0.07
HDAC1-209ENST00000484305 USP17L2Q6R6M4 530 aa15.49■□□□□ 0.07
HDAC1-209ENST00000484305 AMOTL1Q8IY63 956 aa15.49■□□□□ 0.07
HDAC1-209ENST00000484305 ACER1Q8TDN7 264 aa15.49■□□□□ 0.07
HDAC1-209ENST00000484305 ARMC5Q96C12 935 aa15.49■□□□□ 0.07
HDAC1-209ENST00000484305 SEC62Q99442 399 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms