RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 TBC1D2Q9BYX2 928 aa15.93■□□□□ 0.14
UBR4-213ENST00000483922 HERC5Q9UII4 1024 aaKnown RBP15.93■□□□□ 0.14
UBR4-213ENST00000483922 AKAP2Q9Y2D5 859 aa15.93■□□□□ 0.14
UBR4-213ENST00000483922 STXBP5LQ9Y2K9 1186 aa15.93■□□□□ 0.14
UBR4-213ENST00000483922 PNMA6EA0A0J9YXQ4 647 aa15.92■□□□□ 0.14
UBR4-213ENST00000483922 LDHCP07864 332 aa15.92■□□□□ 0.14
UBR4-213ENST00000483922 XRCC5P13010 732 aaKnown RBP15.92■□□□□ 0.14
UBR4-213ENST00000483922 PABPC4Q13310 644 aaKnown RBP eCLIP15.92■□□□□ 0.14
UBR4-213ENST00000483922 MORN1Q5T089 497 aa15.92■□□□□ 0.14
UBR4-213ENST00000483922 EMILIN3Q9NT22 766 aa15.92■□□□□ 0.14
UBR4-213ENST00000483922 AATFQ9NY61 560 aaKnown RBP eCLIP15.92■□□□□ 0.14
UBR4-213ENST00000483922 RAI14Q9P0K7 980 aa15.92■□□□□ 0.14
UBR4-213ENST00000483922 PI4KBQ9UBF8 816 aa15.92■□□□□ 0.14
UBR4-213ENST00000483922 CNMDO75829 334 aa15.91■□□□□ 0.14
UBR4-213ENST00000483922 GSTO1P78417 241 aa15.91■□□□□ 0.14
UBR4-213ENST00000483922 MAPKAPK5Q8IW41 473 aa15.91■□□□□ 0.14
UBR4-213ENST00000483922 GPRC5AQ8NFJ5 357 aa15.91■□□□□ 0.14
UBR4-213ENST00000483922 TGFBRAP1Q8WUH2 860 aa15.91■□□□□ 0.14
UBR4-213ENST00000483922 NUDT12Q9BQG2 462 aa15.91■□□□□ 0.14
UBR4-213ENST00000483922 API5Q9BZZ5 524 aaKnown RBP15.91■□□□□ 0.14
UBR4-213ENST00000483922 SNRKQ9NRH2 765 aa15.91■□□□□ 0.14
UBR4-213ENST00000483922 FLRT1Q9NZU1 646 aa15.91■□□□□ 0.14
UBR4-213ENST00000483922 PALD1Q9ULE6 856 aa15.91■□□□□ 0.14
UBR4-213ENST00000483922 GDF11O95390 407 aa15.9■□□□□ 0.14
UBR4-213ENST00000483922 RARSP54136 660 aaKnown RBP15.9■□□□□ 0.14
UBR4-213ENST00000483922 PPP4CP60510 307 aa15.9■□□□□ 0.14
UBR4-213ENST00000483922 ERVK-9P63128 1117 aa15.9■□□□□ 0.14
UBR4-213ENST00000483922 ERVK-24P63145 666 aa15.9■□□□□ 0.14
UBR4-213ENST00000483922 GPR142Q7Z601 462 aa15.9■□□□□ 0.14
UBR4-213ENST00000483922 UBE2OQ9C0C9 1292 aaKnown RBP15.9■□□□□ 0.14
UBR4-213ENST00000483922 AS3MTQ9HBK9 375 aa15.9■□□□□ 0.14
UBR4-213ENST00000483922 POTEB2H3BUK9 544 aa15.89■□□□□ 0.13
UBR4-213ENST00000483922 CYP2E1P05181 493 aaPredicted RBP15.89■□□□□ 0.13
UBR4-213ENST00000483922 IRX3P78415 501 aaPredicted RBP15.89■□□□□ 0.13
UBR4-213ENST00000483922 MDM2Q00987 491 aaPredicted RBP15.89■□□□□ 0.13
UBR4-213ENST00000483922 FOXP4Q8IVH2 680 aaPredicted RBP15.89■□□□□ 0.13
UBR4-213ENST00000483922 LRP2BPQ9P2M1 347 aa15.89■□□□□ 0.13
UBR4-213ENST00000483922 FLT1P17948 1338 aa15.89■□□□□ 0.13
UBR4-213ENST00000483922 CDH23Q9H251 3354 aa15.89■□□□□ 0.13
UBR4-213ENST00000483922 C19orf81C9J6K1 198 aa15.88■□□□□ 0.13
UBR4-213ENST00000483922 USP17L10C9JJH3 530 aa15.88■□□□□ 0.13
UBR4-213ENST00000483922 ASNSP08243 561 aa15.88■□□□□ 0.13
UBR4-213ENST00000483922 DYNLL1P63167 89 aaKnown RBP15.88■□□□□ 0.13
UBR4-213ENST00000483922 GUCD1Q96NT3 240 aa15.88■□□□□ 0.13
UBR4-213ENST00000483922 COL25A1Q9BXS0 654 aaPredicted RBP15.88■□□□□ 0.13
UBR4-213ENST00000483922 DHX36Q9H2U1 1008 aaKnown RBP15.88■□□□□ 0.13
UBR4-213ENST00000483922 TMOD4Q9NZQ9 345 aa15.88■□□□□ 0.13
UBR4-213ENST00000483922 ZBTB21Q9ULJ3 1066 aa15.88■□□□□ 0.13
UBR4-213ENST00000483922 HDAC5Q9UQL6 1122 aa15.88■□□□□ 0.13
UBR4-213ENST00000483922 NDUFB9Q9Y6M9 179 aa15.88■□□□□ 0.13
UBR4-213ENST00000483922 CDK5RAP2Q96SN8 1893 aa15.87■□□□□ 0.13
UBR4-213ENST00000483922 IGHA2P01877 340 aa15.87■□□□□ 0.13
UBR4-213ENST00000483922 GNAI3P08754 354 aa15.87■□□□□ 0.13
UBR4-213ENST00000483922 GORABQ5T7V8 394 aa15.87■□□□□ 0.13
UBR4-213ENST00000483922 NAA16Q6N069 864 aaPredicted RBP15.87■□□□□ 0.13
UBR4-213ENST00000483922 PLEKHH3Q7Z736 793 aa15.87■□□□□ 0.13
UBR4-213ENST00000483922 SOCS4Q8WXH5 440 aa15.87■□□□□ 0.13
UBR4-213ENST00000483922 ARHGAP45Q92619 1136 aa15.87■□□□□ 0.13
UBR4-213ENST00000483922 DBNDD2Q9BQY9 259 aa15.87■□□□□ 0.13
UBR4-213ENST00000483922 PAGR1Q9BTK6 254 aa15.87■□□□□ 0.13
UBR4-213ENST00000483922 PIH1D3Q9NQM4 214 aaKnown RBP15.87■□□□□ 0.13
UBR4-213ENST00000483922 SAP30BPQ9UHR5 308 aaKnown RBP15.87■□□□□ 0.13
UBR4-213ENST00000483922 CT47B1P0C2W7 299 aaPredicted RBP15.86■□□□□ 0.13
UBR4-213ENST00000483922 ZKSCAN1P17029 563 aaPredicted RBP15.86■□□□□ 0.13
UBR4-213ENST00000483922 MAPK4P31152 587 aa15.86■□□□□ 0.13
UBR4-213ENST00000483922 TRPV1Q8NER1 839 aa15.86■□□□□ 0.13
UBR4-213ENST00000483922 PRUNE2Q8WUY3 3088 aa15.86■□□□□ 0.13
UBR4-213ENST00000483922 MYO5AQ9Y4I1 1855 aaKnown RBP15.86■□□□□ 0.13
UBR4-213ENST00000483922 UQCRFS1P1P0C7P4 283 aa15.85■□□□□ 0.13
UBR4-213ENST00000483922 RGS2P41220 211 aa15.85■□□□□ 0.13
UBR4-213ENST00000483922 NPLOC4Q8TAT6 608 aa15.85■□□□□ 0.13
UBR4-213ENST00000483922 BTBD7Q9P203 1132 aa15.85■□□□□ 0.13
UBR4-213ENST00000483922 BAG3O95817 575 aa15.84■□□□□ 0.13
UBR4-213ENST00000483922 GH2P01242 217 aa15.84■□□□□ 0.13
UBR4-213ENST00000483922 ZAP70P43403 619 aa15.84■□□□□ 0.13
UBR4-213ENST00000483922 MAP2K5Q13163 448 aa15.84■□□□□ 0.13
UBR4-213ENST00000483922 TATDN1Q6P1N9 297 aa15.84■□□□□ 0.13
UBR4-213ENST00000483922 USP17L2Q6R6M4 530 aa15.84■□□□□ 0.13
UBR4-213ENST00000483922 TRMT44Q8IYL2 757 aaKnown RBP15.84■□□□□ 0.13
UBR4-213ENST00000483922 ACER1Q8TDN7 264 aa15.84■□□□□ 0.13
UBR4-213ENST00000483922 EDC3Q96F86 508 aaKnown RBP15.84■□□□□ 0.13
UBR4-213ENST00000483922 SENP6Q9GZR1 1112 aaPredicted RBP15.84■□□□□ 0.13
UBR4-213ENST00000483922 FOCADQ5VW36 1801 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 GNAI2P04899 355 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 TRIM27P14373 513 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 PTPREP23469 700 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 G3BP1Q13283 466 aaKnown RBP eCLIP15.83■□□□□ 0.12
UBR4-213ENST00000483922 PDE3AQ14432 1141 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 ZYXQ15942 572 aaKnown RBP15.83■□□□□ 0.12
UBR4-213ENST00000483922 TNNI3KQ59H18 835 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 FAM109BQ6ICB4 259 aaPredicted RBP15.83■□□□□ 0.12
UBR4-213ENST00000483922 CATSPERGQ6ZRH7 1159 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 CRACR2BQ8N4Y2 399 aaPredicted RBP15.83■□□□□ 0.12
UBR4-213ENST00000483922 C12orf42Q96LP6 360 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 FAM161BQ96MY7 647 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 APBA2Q99767 749 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 GINM1Q9NU53 330 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 RABGAP1Q9Y3P9 1069 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 FPGT-TNNI3KV9GXZ4 949 aa15.83■□□□□ 0.12
UBR4-213ENST00000483922 BCAR3O75815 825 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms