RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 SLURP2P0DP57 97 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 TDO2P48775 406 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 NMIQ13287 307 aaPredicted RBP18.66■□□□□ 0.58
RPP40-206ENST00000483546 SLC4A8Q2Y0W8 1093 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 IFNL1Q8IU54 200 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 IFNL3Q8IZI9 196 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 FAM227BQ96M60 508 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 CFHR5Q9BXR6 569 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 ZHX2Q9Y6X8 837 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 ROBO3Q96MS0 1386 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 CCL15-CCL14A0A0B4J2E2 113 aa18.65■□□□□ 0.58
RPP40-206ENST00000483546 SHMT1P34896 483 aa18.65■□□□□ 0.58
RPP40-206ENST00000483546 CCL15Q16663 113 aa18.65■□□□□ 0.58
RPP40-206ENST00000483546 CERKLQ49MI3 558 aaPredicted RBP18.65■□□□□ 0.58
RPP40-206ENST00000483546 C16orf86Q6ZW13 317 aa18.65■□□□□ 0.58
RPP40-206ENST00000483546 NAPBQ9H115 298 aa18.65■□□□□ 0.58
RPP40-206ENST00000483546 ZNF287Q9HBT7 754 aa18.65■□□□□ 0.58
RPP40-206ENST00000483546 EPB41L4AQ9HCS5 686 aaPredicted RBP18.65■□□□□ 0.58
RPP40-206ENST00000483546 RNF186Q9NXI6 227 aa18.65■□□□□ 0.58
RPP40-206ENST00000483546 ZBTB21Q9ULJ3 1066 aa18.65■□□□□ 0.58
RPP40-206ENST00000483546 AFG3L2Q9Y4W6 797 aa18.65■□□□□ 0.58
RPP40-206ENST00000483546 CCDC171Q6TFL3 1326 aa18.65■□□□□ 0.58
RPP40-206ENST00000483546 FOXN1O15353 648 aa18.64■□□□□ 0.57
RPP40-206ENST00000483546 RRP1BQ14684 758 aaKnown RBP18.64■□□□□ 0.57
RPP40-206ENST00000483546 ALX1Q15699 326 aa18.64■□□□□ 0.57
RPP40-206ENST00000483546 CCDC17Q96LX7 622 aa18.64■□□□□ 0.57
RPP40-206ENST00000483546 WDR18Q9BV38 432 aa18.64■□□□□ 0.57
RPP40-206ENST00000483546 CABP5Q9NP86 173 aa18.64■□□□□ 0.57
RPP40-206ENST00000483546 ZMYM6O95789 1325 aa18.64■□□□□ 0.57
RPP40-206ENST00000483546 RAD50Q92878 1312 aa18.64■□□□□ 0.57
RPP40-206ENST00000483546 A0A0G2JLL6 359 aaPredicted RBP18.63■□□□□ 0.57
RPP40-206ENST00000483546 CYP2D6P10635 497 aa18.63■□□□□ 0.57
RPP40-206ENST00000483546 ABCB5Q2M3G0 1257 aa18.63■□□□□ 0.57
RPP40-206ENST00000483546 NOM1Q5C9Z4 860 aaKnown RBP18.63■□□□□ 0.57
RPP40-206ENST00000483546 CCDC129Q6ZRS4 1044 aa18.63■□□□□ 0.57
RPP40-206ENST00000483546 FASTKD5Q7L8L6 764 aaKnown RBP18.63■□□□□ 0.57
RPP40-206ENST00000483546 PRRT2Q7Z6L0 340 aaPredicted RBP18.63■□□□□ 0.57
RPP40-206ENST00000483546 ZNF280CQ8ND82 737 aa18.63■□□□□ 0.57
RPP40-206ENST00000483546 RUFY2Q8WXA3 655 aa18.63■□□□□ 0.57
RPP40-206ENST00000483546 BRI3BPQ8WY22 251 aa18.63■□□□□ 0.57
RPP40-206ENST00000483546 IGF2BP3O00425 579 aaKnown RBP eCLIP18.62■□□□□ 0.57
RPP40-206ENST00000483546 TRPA1O75762 1119 aa18.62■□□□□ 0.57
RPP40-206ENST00000483546 SLC3A2P08195 630 aaKnown RBP18.62■□□□□ 0.57
RPP40-206ENST00000483546 CDK8P49336 464 aa18.62■□□□□ 0.57
RPP40-206ENST00000483546 BMP2KLQ5H9B9 411 aa18.62■□□□□ 0.57
RPP40-206ENST00000483546 CWC27Q6UX04 472 aaKnown RBP18.62■□□□□ 0.57
RPP40-206ENST00000483546 PRDM10Q9NQV6 1147 aa18.62■□□□□ 0.57
RPP40-206ENST00000483546 LOC285556D6RIA3 1793 aa18.62■□□□□ 0.57
RPP40-206ENST00000483546 CYP2D7A0A087X1C5 515 aa18.61■□□□□ 0.57
RPP40-206ENST00000483546 MINDY4BA8MYZ0 360 aa18.61■□□□□ 0.57
RPP40-206ENST00000483546 GDF11O95390 407 aa18.61■□□□□ 0.57
RPP40-206ENST00000483546 GH2P01242 217 aa18.61■□□□□ 0.57
RPP40-206ENST00000483546 HSPA8P11142 646 aaKnown RBP18.61■□□□□ 0.57
RPP40-206ENST00000483546 TMEM179Q6ZVK1 233 aa18.61■□□□□ 0.57
RPP40-206ENST00000483546 ANKRD23Q86SG2 305 aa18.61■□□□□ 0.57
RPP40-206ENST00000483546 DYNLL2Q96FJ2 89 aa18.61■□□□□ 0.57
RPP40-206ENST00000483546 PTPN18Q99952 460 aa18.61■□□□□ 0.57
RPP40-206ENST00000483546 C19orf81C9J6K1 198 aa18.6■□□□□ 0.57
RPP40-206ENST00000483546 FOXP2O15409 715 aa18.6■□□□□ 0.57
RPP40-206ENST00000483546 HSPD1P10809 573 aaKnown RBP18.6■□□□□ 0.57
RPP40-206ENST00000483546 SPP2Q13103 211 aa18.6■□□□□ 0.57
RPP40-206ENST00000483546 ZNF589Q86UQ0 364 aaPredicted RBP18.6■□□□□ 0.57
RPP40-206ENST00000483546 PROCA1Q8NCQ7 364 aaPredicted RBP18.6■□□□□ 0.57
RPP40-206ENST00000483546 SLC45A1Q9Y2W3 748 aa18.6■□□□□ 0.57
RPP40-206ENST00000483546 TRIM75PA6NK02 468 aa18.59■□□□□ 0.57
RPP40-206ENST00000483546 EVX2Q03828 476 aa18.59■□□□□ 0.57
RPP40-206ENST00000483546 PDE4BQ07343 736 aa18.59■□□□□ 0.57
RPP40-206ENST00000483546 PPARAQ07869 468 aa18.59■□□□□ 0.57
RPP40-206ENST00000483546 SH3D19Q5HYK7 790 aa18.59■□□□□ 0.57
RPP40-206ENST00000483546 VPS53Q5VIR6 699 aa18.59■□□□□ 0.57
RPP40-206ENST00000483546 SLC44A5Q8NCS7 719 aa18.59■□□□□ 0.57
RPP40-206ENST00000483546 ANAPC4Q9UJX5 808 aa18.59■□□□□ 0.57
RPP40-206ENST00000483546 GREB1LQ9C091 1923 aaPredicted RBP18.59■□□□□ 0.57
RPP40-206ENST00000483546 LAMA4Q16363 1823 aa18.58■□□□□ 0.57
RPP40-206ENST00000483546 BTBD19C9JJ37 291 aa18.58■□□□□ 0.56
RPP40-206ENST00000483546 USP17L10C9JJH3 530 aa18.58■□□□□ 0.56
RPP40-206ENST00000483546 CHMLP26374 656 aa18.58■□□□□ 0.56
RPP40-206ENST00000483546 BACE1P56817 501 aa18.58■□□□□ 0.56
RPP40-206ENST00000483546 JAG1P78504 1218 aa18.58■□□□□ 0.56
RPP40-206ENST00000483546 MOGSQ13724 837 aa18.58■□□□□ 0.56
RPP40-206ENST00000483546 DSCC1Q9BVC3 393 aa18.58■□□□□ 0.56
RPP40-206ENST00000483546 MKNK2Q9HBH9 465 aa18.58■□□□□ 0.56
RPP40-206ENST00000483546 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.58■□□□□ 0.56
RPP40-206ENST00000483546 MPHOSPH10O00566 681 aaKnown RBP18.57■□□□□ 0.56
RPP40-206ENST00000483546 FGAP02671 866 aa18.57■□□□□ 0.56
RPP40-206ENST00000483546 PCP11498 1178 aaKnown RBP18.57■□□□□ 0.56
RPP40-206ENST00000483546 LBX1P52954 281 aa18.57■□□□□ 0.56
RPP40-206ENST00000483546 USP14P54578 494 aa18.57■□□□□ 0.56
RPP40-206ENST00000483546 PABPC4Q13310 644 aaKnown RBP eCLIP18.57■□□□□ 0.56
RPP40-206ENST00000483546 RAB3GAP1Q15042 981 aa18.57■□□□□ 0.56
RPP40-206ENST00000483546 TAF1CQ15572 869 aaPredicted RBP18.57■□□□□ 0.56
RPP40-206ENST00000483546 CCDC84Q86UT8 332 aaPredicted RBP18.57■□□□□ 0.56
RPP40-206ENST00000483546 FAM43AQ8N2R8 423 aa18.57■□□□□ 0.56
RPP40-206ENST00000483546 ZFYVE28Q9HCC9 887 aa18.57■□□□□ 0.56
RPP40-206ENST00000483546 NT5C2P49902 561 aa18.56■□□□□ 0.56
RPP40-206ENST00000483546 GADL1Q6ZQY3 521 aa18.56■□□□□ 0.56
RPP40-206ENST00000483546 ZNF444Q8N0Y2 327 aaPredicted RBP18.56■□□□□ 0.56
RPP40-206ENST00000483546 PARK7Q99497 189 aaKnown RBP18.56■□□□□ 0.56
RPP40-206ENST00000483546 SH2D4AQ9H788 454 aa18.56■□□□□ 0.56
RPP40-206ENST00000483546 TMOD4Q9NZQ9 345 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms