RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 PTPN18Q99952 460 aa19.55■□□□□ 0.72
CCDC78-212ENST00000482152 CABP5Q9NP86 173 aa19.55■□□□□ 0.72
CCDC78-212ENST00000482152 LAMB1P07942 1786 aa19.55■□□□□ 0.72
CCDC78-212ENST00000482152 IGF2BP3O00425 579 aaKnown RBP eCLIP19.54■□□□□ 0.72
CCDC78-212ENST00000482152 RRP1BQ14684 758 aaKnown RBP19.54■□□□□ 0.72
CCDC78-212ENST00000482152 SLC4A8Q2Y0W8 1093 aa19.54■□□□□ 0.72
CCDC78-212ENST00000482152 TTC22Q5TAA0 569 aa19.54■□□□□ 0.72
CCDC78-212ENST00000482152 ANKRD23Q86SG2 305 aa19.54■□□□□ 0.72
CCDC78-212ENST00000482152 CCDC17Q96LX7 622 aa19.54■□□□□ 0.72
CCDC78-212ENST00000482152 SEC62Q99442 399 aaKnown RBP19.54■□□□□ 0.72
CCDC78-212ENST00000482152 ZNF287Q9HBT7 754 aa19.54■□□□□ 0.72
CCDC78-212ENST00000482152 MYH1P12882 1939 aa19.54■□□□□ 0.72
CCDC78-212ENST00000482152 A0A0G2JLL6 359 aaPredicted RBP19.53■□□□□ 0.72
CCDC78-212ENST00000482152 SHMT1P34896 483 aa19.53■□□□□ 0.72
CCDC78-212ENST00000482152 ABCB5Q2M3G0 1257 aa19.53■□□□□ 0.72
CCDC78-212ENST00000482152 PRRT2Q7Z6L0 340 aaPredicted RBP19.53■□□□□ 0.72
CCDC78-212ENST00000482152 IFNL3Q8IZI9 196 aa19.53■□□□□ 0.72
CCDC78-212ENST00000482152 C19orf81C9J6K1 198 aa19.52■□□□□ 0.72
CCDC78-212ENST00000482152 TDO2P48775 406 aa19.52■□□□□ 0.72
CCDC78-212ENST00000482152 C16orf86Q6ZW13 317 aa19.52■□□□□ 0.72
CCDC78-212ENST00000482152 PROCA1Q8NCQ7 364 aaPredicted RBP19.52■□□□□ 0.72
CCDC78-212ENST00000482152 ZFYVE28Q9HCC9 887 aa19.52■□□□□ 0.72
CCDC78-212ENST00000482152 DIAPH3Q9NSV4 1193 aa19.52■□□□□ 0.72
CCDC78-212ENST00000482152 ZBTB21Q9ULJ3 1066 aa19.52■□□□□ 0.72
CCDC78-212ENST00000482152 SLC45A1Q9Y2W3 748 aa19.52■□□□□ 0.72
CCDC78-212ENST00000482152 BTBD19C9JJ37 291 aa19.51■□□□□ 0.71
CCDC78-212ENST00000482152 TBC1D8O95759 1140 aa19.51■□□□□ 0.71
CCDC78-212ENST00000482152 GH2P01242 217 aa19.51■□□□□ 0.71
CCDC78-212ENST00000482152 SLC3A2P08195 630 aaKnown RBP19.51■□□□□ 0.71
CCDC78-212ENST00000482152 CYP2D6P10635 497 aa19.51■□□□□ 0.71
CCDC78-212ENST00000482152 SPP2Q13103 211 aa19.51■□□□□ 0.71
CCDC78-212ENST00000482152 ALX1Q15699 326 aa19.51■□□□□ 0.71
CCDC78-212ENST00000482152 SH3D19Q5HYK7 790 aa19.51■□□□□ 0.71
CCDC78-212ENST00000482152 NAPBQ9H115 298 aa19.51■□□□□ 0.71
CCDC78-212ENST00000482152 SIPA1L1O43166 1804 aa19.51■□□□□ 0.71
CCDC78-212ENST00000482152 DDX60LQ5H9U9 1706 aaKnown RBP19.51■□□□□ 0.71
CCDC78-212ENST00000482152 DOCK1Q14185 1865 aa19.5■□□□□ 0.71
CCDC78-212ENST00000482152 NAV1Q8NEY1 1877 aa19.5■□□□□ 0.71
CCDC78-212ENST00000482152 TRIM75PA6NK02 468 aa19.5■□□□□ 0.71
CCDC78-212ENST00000482152 GDF11O95390 407 aa19.5■□□□□ 0.71
CCDC78-212ENST00000482152 CDK8P49336 464 aa19.5■□□□□ 0.71
CCDC78-212ENST00000482152 NMIQ13287 307 aaPredicted RBP19.5■□□□□ 0.71
CCDC78-212ENST00000482152 FAM43AQ8N2R8 423 aa19.5■□□□□ 0.71
CCDC78-212ENST00000482152 FAM227BQ96M60 508 aa19.5■□□□□ 0.71
CCDC78-212ENST00000482152 TSKSQ9UJT2 592 aa19.5■□□□□ 0.71
CCDC78-212ENST00000482152 A0A0D9SFI3 127 aa19.49■□□□□ 0.71
CCDC78-212ENST00000482152 MINDY4BA8MYZ0 360 aa19.49■□□□□ 0.71
CCDC78-212ENST00000482152 USP17L10C9JJH3 530 aa19.49■□□□□ 0.71
CCDC78-212ENST00000482152 GPR25O00155 361 aa19.49■□□□□ 0.71
CCDC78-212ENST00000482152 BACE1P56817 501 aa19.49■□□□□ 0.71
CCDC78-212ENST00000482152 PABPC4Q13310 644 aaKnown RBP eCLIP19.49■□□□□ 0.71
CCDC78-212ENST00000482152 MOGSQ13724 837 aa19.49■□□□□ 0.71
CCDC78-212ENST00000482152 TAF1CQ15572 869 aaPredicted RBP19.49■□□□□ 0.71
CCDC78-212ENST00000482152 TMEM179Q6ZVK1 233 aa19.49■□□□□ 0.71
CCDC78-212ENST00000482152 EPB41L4AQ9HCS5 686 aaPredicted RBP19.49■□□□□ 0.71
CCDC78-212ENST00000482152 ROBO3Q96MS0 1386 aa19.48■□□□□ 0.71
CCDC78-212ENST00000482152 PDHXO00330 501 aa19.48■□□□□ 0.71
CCDC78-212ENST00000482152 GSPT1P15170 499 aaKnown RBP19.48■□□□□ 0.71
CCDC78-212ENST00000482152 JAG1P78504 1218 aa19.48■□□□□ 0.71
CCDC78-212ENST00000482152 RUFY2Q8WXA3 655 aa19.48■□□□□ 0.71
CCDC78-212ENST00000482152 DYNLL2Q96FJ2 89 aa19.48■□□□□ 0.71
CCDC78-212ENST00000482152 MKNK2Q9HBH9 465 aa19.48■□□□□ 0.71
CCDC78-212ENST00000482152 TMOD4Q9NZQ9 345 aa19.48■□□□□ 0.71
CCDC78-212ENST00000482152 CCDC171Q6TFL3 1326 aa19.48■□□□□ 0.71
CCDC78-212ENST00000482152 CYP2D7A0A087X1C5 515 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 TLR2O60603 784 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 USP14P54578 494 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 PDE4BQ07343 736 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 CRHR2Q13324 411 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 RAB3GAP1Q15042 981 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 GPAT2Q6NUI2 795 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 CWC27Q6UX04 472 aaKnown RBP19.47■□□□□ 0.71
CCDC78-212ENST00000482152 GADL1Q6ZQY3 521 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 CCDC129Q6ZRS4 1044 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 PPP4R2Q9NY27 417 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 AGTPBP1Q9UPW5 1226 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 ZMYM6O95789 1325 aa19.47■□□□□ 0.71
CCDC78-212ENST00000482152 MPHOSPH10O00566 681 aaKnown RBP19.46■□□□□ 0.71
CCDC78-212ENST00000482152 FKTNO75072 461 aa19.46■□□□□ 0.71
CCDC78-212ENST00000482152 HSPD1P10809 573 aaKnown RBP19.46■□□□□ 0.71
CCDC78-212ENST00000482152 USP17L2Q6R6M4 530 aa19.46■□□□□ 0.71
CCDC78-212ENST00000482152 ZNF444Q8N0Y2 327 aaPredicted RBP19.46■□□□□ 0.71
CCDC78-212ENST00000482152 SLC44A5Q8NCS7 719 aa19.46■□□□□ 0.71
CCDC78-212ENST00000482152 PARK7Q99497 189 aaKnown RBP19.46■□□□□ 0.71
CCDC78-212ENST00000482152 KIAA1683Q9H0B3 1180 aa19.46■□□□□ 0.71
CCDC78-212ENST00000482152 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.46■□□□□ 0.71
CCDC78-212ENST00000482152 ANAPC4Q9UJX5 808 aa19.46■□□□□ 0.71
CCDC78-212ENST00000482152 PNMA3Q9UL41 463 aa19.46■□□□□ 0.71
CCDC78-212ENST00000482152 HMGCS2P54868 508 aa19.45■□□□□ 0.7
CCDC78-212ENST00000482152 EVX2Q03828 476 aa19.45■□□□□ 0.7
CCDC78-212ENST00000482152 PPARAQ07869 468 aa19.45■□□□□ 0.7
CCDC78-212ENST00000482152 ARHGEF6Q15052 776 aa19.45■□□□□ 0.7
CCDC78-212ENST00000482152 COL13A1Q5TAT6 717 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-212ENST00000482152 CCDC84Q86UT8 332 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-212ENST00000482152 ZNF296Q8WUU4 475 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-212ENST00000482152 KANSL2Q9H9L4 492 aa19.45■□□□□ 0.7
CCDC78-212ENST00000482152 FOXP2O15409 715 aa19.44■□□□□ 0.7
CCDC78-212ENST00000482152 FGAP02671 866 aa19.44■□□□□ 0.7
CCDC78-212ENST00000482152 GUCY1A2P33402 732 aa19.44■□□□□ 0.7
CCDC78-212ENST00000482152 MTMR2Q13614 643 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms