RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 FOXP2O15409 715 aa12.74□□□□□ -0.37
SSBP1-210ENST00000481508 PLCD1P51178 756 aa12.74□□□□□ -0.37
SSBP1-210ENST00000481508 JAG1P78504 1218 aa12.74□□□□□ -0.37
SSBP1-210ENST00000481508 TTC22Q5TAA0 569 aa12.74□□□□□ -0.37
SSBP1-210ENST00000481508 CCDC84Q86UT8 332 aaPredicted RBP12.74□□□□□ -0.37
SSBP1-210ENST00000481508 RILPL2Q969X0 211 aa12.74□□□□□ -0.37
SSBP1-210ENST00000481508 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
SSBP1-210ENST00000481508 FAM227BQ96M60 508 aa12.74□□□□□ -0.37
SSBP1-210ENST00000481508 CRNKL1Q9BZJ0 848 aaKnown RBP12.74□□□□□ -0.37
SSBP1-210ENST00000481508 EPB41L4AQ9HCS5 686 aaPredicted RBP12.74□□□□□ -0.37
SSBP1-210ENST00000481508 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
SSBP1-210ENST00000481508 UNC80Q8N2C7 3258 aa12.73□□□□□ -0.37
SSBP1-210ENST00000481508 A0A0D9SFI3 127 aa12.73□□□□□ -0.37
SSBP1-210ENST00000481508 POTEFA5A3E0 1075 aa12.73□□□□□ -0.37
SSBP1-210ENST00000481508 GPAA1O43292 621 aa12.73□□□□□ -0.37
SSBP1-210ENST00000481508 TBC1D12O60347 775 aa12.73□□□□□ -0.37
SSBP1-210ENST00000481508 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-210ENST00000481508 ZNF296Q8WUU4 475 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-210ENST00000481508 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
SSBP1-210ENST00000481508 SLC10A4Q96EP9 437 aa12.73□□□□□ -0.37
SSBP1-210ENST00000481508 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
SSBP1-210ENST00000481508 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.73□□□□□ -0.37
SSBP1-210ENST00000481508 COLQQ9Y215 455 aaPredicted RBP12.73□□□□□ -0.37
SSBP1-210ENST00000481508 SLC4A4Q9Y6R1 1079 aa12.73□□□□□ -0.37
SSBP1-210ENST00000481508 LAMA3Q16787 3333 aa12.73□□□□□ -0.37
SSBP1-210ENST00000481508 SPDYE5A6NIY4 337 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 GSG1L2A8MUP6 293 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 NMIQ13287 307 aaPredicted RBP12.72□□□□□ -0.37
SSBP1-210ENST00000481508 NOL9Q5SY16 702 aaKnown RBP12.72□□□□□ -0.37
SSBP1-210ENST00000481508 METTL16Q86W50 562 aaKnown RBP12.72□□□□□ -0.37
SSBP1-210ENST00000481508 CERS3Q8IU89 383 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 HOOK2Q96ED9 719 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 CCDC136Q96JN2 1154 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 IL25Q9H293 177 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 PI4KBQ9UBF8 816 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 CSADQ9Y600 493 aa12.72□□□□□ -0.37
SSBP1-210ENST00000481508 GREB1LQ9C091 1923 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-210ENST00000481508 TBC1D8O95759 1140 aa12.71□□□□□ -0.37
SSBP1-210ENST00000481508 SDSP20132 328 aa12.71□□□□□ -0.37
SSBP1-210ENST00000481508 GABPAQ06546 454 aa12.71□□□□□ -0.37
SSBP1-210ENST00000481508 VPS53Q5VIR6 699 aa12.71□□□□□ -0.37
SSBP1-210ENST00000481508 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-210ENST00000481508 ZNF589Q86UQ0 364 aaPredicted RBP12.71□□□□□ -0.37
SSBP1-210ENST00000481508 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.37
SSBP1-210ENST00000481508 DYNLL2Q96FJ2 89 aa12.71□□□□□ -0.37
SSBP1-210ENST00000481508 DHX36Q9H2U1 1008 aaKnown RBP12.71□□□□□ -0.37
SSBP1-210ENST00000481508 LAMA4Q16363 1823 aa12.71□□□□□ -0.38
SSBP1-210ENST00000481508 LOC285556D6RIA3 1793 aa12.71□□□□□ -0.38
SSBP1-210ENST00000481508 UNCXA6NJT0 531 aa12.7□□□□□ -0.38
SSBP1-210ENST00000481508 GDF11O95390 407 aa12.7□□□□□ -0.38
SSBP1-210ENST00000481508 HLA-DOAP06340 250 aa12.7□□□□□ -0.38
SSBP1-210ENST00000481508 CTR9Q6PD62 1173 aa12.7□□□□□ -0.38
SSBP1-210ENST00000481508 RASEFQ8IZ41 740 aa12.7□□□□□ -0.38
SSBP1-210ENST00000481508 SCYL3Q8IZE3 742 aa12.7□□□□□ -0.38
SSBP1-210ENST00000481508 KIF12Q96FN5 646 aa12.7□□□□□ -0.38
SSBP1-210ENST00000481508 ATP8A2Q9NTI2 1148 aa12.7□□□□□ -0.38
SSBP1-210ENST00000481508 HERC5Q9UII4 1024 aaKnown RBP12.7□□□□□ -0.38
SSBP1-210ENST00000481508 USP17L12C9JPN9 530 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 USP17L21D6R901 530 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 IGF2BP3O00425 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
SSBP1-210ENST00000481508 IRF6O14896 467 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 POLR3DP05423 398 aaPredicted RBP12.69□□□□□ -0.38
SSBP1-210ENST00000481508 ZBTB48P10074 688 aaPredicted RBP12.69□□□□□ -0.38
SSBP1-210ENST00000481508 PTPRAP18433 802 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 SHMT1P34896 483 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 CAP2P40123 477 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 ERO1BQ86YB8 467 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 FOXP4Q8IVH2 680 aaPredicted RBP12.69□□□□□ -0.38
SSBP1-210ENST00000481508 MS4A4AQ96JQ5 239 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 PTPN18Q99952 460 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 EHD4Q9H223 541 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
SSBP1-210ENST00000481508 CTNND1O60716 968 aaKnown RBP12.68□□□□□ -0.38
SSBP1-210ENST00000481508 PPIL2Q13356 520 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 MOGSQ13724 837 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 LRRFIP1Q32MZ4 808 aaKnown RBP12.68□□□□□ -0.38
SSBP1-210ENST00000481508 C12orf60Q5U649 245 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 TATDN1Q6P1N9 297 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 TTC6Q86TZ1 520 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 IFNL3Q8IZI9 196 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 STK11IPQ8N1F8 1099 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 CRACR2BQ8N4Y2 399 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-210ENST00000481508 SLC17A8Q8NDX2 589 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 BRI3BPQ8WY22 251 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 HELLSQ9NRZ9 838 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 PPP4R2Q9NY27 417 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 TACC3Q9Y6A5 838 aa12.68□□□□□ -0.38
SSBP1-210ENST00000481508 ZSWIM8A7E2V4 1837 aa12.67□□□□□ -0.38
SSBP1-210ENST00000481508 PATL2C9JE40 543 aaKnown RBP12.67□□□□□ -0.38
SSBP1-210ENST00000481508 GUCY1A2P33402 732 aa12.67□□□□□ -0.38
SSBP1-210ENST00000481508 TM4SF4P48230 202 aa12.67□□□□□ -0.38
SSBP1-210ENST00000481508 PPATQ06203 517 aa12.67□□□□□ -0.38
SSBP1-210ENST00000481508 PKN2Q16513 984 aaKnown RBP12.67□□□□□ -0.38
SSBP1-210ENST00000481508 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
SSBP1-210ENST00000481508 FBXO46Q6PJ61 603 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-210ENST00000481508 CWC27Q6UX04 472 aaKnown RBP12.67□□□□□ -0.38
SSBP1-210ENST00000481508 R3HDMLQ9H3Y0 253 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms