RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 LENG1Q96BZ8 264 aaPredicted RBP7.89□□□□□ -1.15
UPF3A-207ENST00000481131 TM9SF2Q99805 663 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 TRIM55Q9BYV6 548 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 CNNM2Q9H8M5 875 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 AKTIPQ9H8T0 292 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 PICK1Q9NRD5 415 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 SIRPGQ9P1W8 387 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 KLHL3Q9UH77 587 aa7.89□□□□□ -1.15
UPF3A-207ENST00000481131 CDK11AQ9UQ88 783 aaPredicted RBP7.89□□□□□ -1.15
UPF3A-207ENST00000481131 SMARCA5O60264 1052 aaPredicted RBP7.88□□□□□ -1.15
UPF3A-207ENST00000481131 APBA3O96018 575 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 NME1P15531 152 aaKnown RBP7.88□□□□□ -1.15
UPF3A-207ENST00000481131 GUCY2CP25092 1073 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 PREPP48147 710 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 ARSHQ5FYA8 562 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 CDCP2Q5VXM1 449 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 ANKRD34AQ69YU3 496 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 FDX2Q6P4F2 183 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 NLRC3Q7RTR2 1065 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 NOP9Q86U38 636 aaKnown RBP7.88□□□□□ -1.15
UPF3A-207ENST00000481131 MCATQ8IVS2 390 aaKnown RBP7.88□□□□□ -1.15
UPF3A-207ENST00000481131 ISL2Q96A47 359 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 TMEM87BQ96K49 555 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 TPSG1Q9NRR2 321 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 MSRB2Q9Y3D2 182 aa7.88□□□□□ -1.15
UPF3A-207ENST00000481131 FAM221BA6H8Z2 402 aa7.87□□□□□ -1.15
UPF3A-207ENST00000481131 ADGRE1Q14246 886 aa7.87□□□□□ -1.15
UPF3A-207ENST00000481131 SLBPQ14493 270 aaKnown RBP eCLIP7.87□□□□□ -1.15
UPF3A-207ENST00000481131 RASA3Q14644 834 aa7.87□□□□□ -1.15
UPF3A-207ENST00000481131 MRPL41Q8IXM3 137 aaKnown RBP7.87□□□□□ -1.15
UPF3A-207ENST00000481131 ZNF507Q8TCN5 953 aa7.87□□□□□ -1.15
UPF3A-207ENST00000481131 MKL1Q969V6 931 aa7.87□□□□□ -1.15
UPF3A-207ENST00000481131 SLC9A7Q96T83 725 aa7.87□□□□□ -1.15
UPF3A-207ENST00000481131 USP21Q9UK80 565 aa7.87□□□□□ -1.15
UPF3A-207ENST00000481131 LTBP3Q9NS15 1303 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 TNFRSF10CO14798 259 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 NOS3P29474 1203 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 POLR2BP30876 1174 aaKnown RBP7.86□□□□□ -1.15
UPF3A-207ENST00000481131 ASPAP45381 313 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 MLECQ14165 292 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 MBTPS1Q14703 1052 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 PPP2R5EQ16537 467 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 DDR2Q16832 855 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 RSPO4Q2I0M5 234 aaPredicted RBP7.86□□□□□ -1.15
UPF3A-207ENST00000481131 LARP1BQ659C4 914 aaKnown RBP7.86□□□□□ -1.15
UPF3A-207ENST00000481131 ZNF746Q6NUN9 644 aaPredicted RBP7.86□□□□□ -1.15
UPF3A-207ENST00000481131 HID1Q8IV36 788 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 Q8N3U1 123 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 FAM13CQ8NE31 585 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 UBL7Q96S82 380 aaPredicted RBP7.86□□□□□ -1.15
UPF3A-207ENST00000481131 DPH2Q9BQC3 489 aaPredicted RBP7.86□□□□□ -1.15
UPF3A-207ENST00000481131 ST7Q9NRC1 585 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 SNTG2Q9NY99 539 aa7.86□□□□□ -1.15
UPF3A-207ENST00000481131 R3HCC1Q9Y3T6 440 aaKnown RBP7.86□□□□□ -1.15
UPF3A-207ENST00000481131 B2RBV5 119 aa7.85□□□□□ -1.15
UPF3A-207ENST00000481131 CAP2P40123 477 aa7.85□□□□□ -1.15
UPF3A-207ENST00000481131 INTS3Q68E01 1043 aaKnown RBP7.85□□□□□ -1.15
UPF3A-207ENST00000481131 UNC5AQ6ZN44 842 aa7.85□□□□□ -1.15
UPF3A-207ENST00000481131 SLFN12Q8IYM2 578 aa7.85□□□□□ -1.15
UPF3A-207ENST00000481131 WFDC12Q8WWY7 111 aa7.85□□□□□ -1.15
UPF3A-207ENST00000481131 ACSS3Q9H6R3 686 aa7.85□□□□□ -1.15
UPF3A-207ENST00000481131 FAM86C2PA6NEL3 165 aa7.84□□□□□ -1.15
UPF3A-207ENST00000481131 U2SURPO15042 1029 aaKnown RBP7.84□□□□□ -1.15
UPF3A-207ENST00000481131 IREB2P48200 963 aaKnown RBP7.84□□□□□ -1.15
UPF3A-207ENST00000481131 NFE2L2Q16236 605 aa7.84□□□□□ -1.15
UPF3A-207ENST00000481131 NKAPLQ5M9Q1 402 aa7.84□□□□□ -1.15
UPF3A-207ENST00000481131 SLC6A19Q695T7 634 aa7.84□□□□□ -1.15
UPF3A-207ENST00000481131 CDPF1Q6NVV7 123 aa7.84□□□□□ -1.15
UPF3A-207ENST00000481131 SMYD4Q8IYR2 804 aaPredicted RBP7.84□□□□□ -1.15
UPF3A-207ENST00000481131 FAM177A1Q8N128 213 aaPredicted RBP7.84□□□□□ -1.15
UPF3A-207ENST00000481131 FAM46AQ96IP4 442 aaKnown RBP7.84□□□□□ -1.15
UPF3A-207ENST00000481131 DEPDC7Q96QD5 511 aa7.84□□□□□ -1.15
UPF3A-207ENST00000481131 PIDD1Q9HB75 910 aa7.84□□□□□ -1.15
UPF3A-207ENST00000481131 MAPK8IP1Q9UQF2 711 aa7.84□□□□□ -1.15
UPF3A-207ENST00000481131 TBX22Q9Y458 520 aa7.84□□□□□ -1.15
UPF3A-207ENST00000481131 RNGTTO60942 597 aaKnown RBP7.83□□□□□ -1.16
UPF3A-207ENST00000481131 GJB6O95452 261 aa7.83□□□□□ -1.16
UPF3A-207ENST00000481131 GLB1P16278 677 aa7.83□□□□□ -1.16
UPF3A-207ENST00000481131 YARSP54577 528 aaKnown RBP7.83□□□□□ -1.16
UPF3A-207ENST00000481131 FXNQ16595 210 aa7.83□□□□□ -1.16
UPF3A-207ENST00000481131 PRAMEF13Q5VWM6 474 aa7.83□□□□□ -1.16
UPF3A-207ENST00000481131 C6orf15Q6UXA7 325 aaPredicted RBP7.83□□□□□ -1.16
UPF3A-207ENST00000481131 CDC37L1Q7L3B6 337 aa7.83□□□□□ -1.16
UPF3A-207ENST00000481131 JAZF1Q86VZ6 243 aa7.83□□□□□ -1.16
UPF3A-207ENST00000481131 SRPK1Q96SB4 655 aaKnown RBP7.83□□□□□ -1.16
UPF3A-207ENST00000481131 CADPSQ9ULU8 1353 aa7.83□□□□□ -1.16
UPF3A-207ENST00000481131 CCDC85CA6NKD9 419 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 C9orf172C9J069 976 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 UBOX5O94941 541 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 CST3P01034 146 aaPredicted RBP7.82□□□□□ -1.16
UPF3A-207ENST00000481131 RAG1P15918 1043 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 RAB6AP20340 208 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 MRM1Q6IN84 353 aaKnown RBP7.82□□□□□ -1.16
UPF3A-207ENST00000481131 LRP10Q7Z4F1 713 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 NLGN1Q8N2Q7 840 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 MRFAP1L1Q96HT8 127 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 MEGF10Q96KG7 1140 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 KIF2CQ99661 725 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 CEP41Q9BYV8 373 aa7.82□□□□□ -1.16
UPF3A-207ENST00000481131 CCDC113Q9H0I3 377 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms