RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 RREB1Q92766 1687 aa10.1□□□□□ -0.79
CBX3-206ENST00000481057 CFAP65Q6ZU64 1925 aaKnown RBP10.1□□□□□ -0.79
CBX3-206ENST00000481057 ENC1O14682 589 aa10.1□□□□□ -0.79
CBX3-206ENST00000481057 WISP1O95388 367 aa10.1□□□□□ -0.79
CBX3-206ENST00000481057 ST13P50502 369 aaKnown RBP10.1□□□□□ -0.79
CBX3-206ENST00000481057 PPP2R3AQ06190 1150 aa10.1□□□□□ -0.79
CBX3-206ENST00000481057 UBASH3BQ8TF42 649 aa10.1□□□□□ -0.79
CBX3-206ENST00000481057 LENG1Q96BZ8 264 aaPredicted RBP10.1□□□□□ -0.79
CBX3-206ENST00000481057 KIAA1522Q9P206 1035 aaPredicted RBP10.1□□□□□ -0.79
CBX3-206ENST00000481057 USP31Q70CQ4 1352 aa10.1□□□□□ -0.79
CBX3-206ENST00000481057 COL22A1Q8NFW1 1626 aaPredicted RBP10.09□□□□□ -0.79
CBX3-206ENST00000481057 AP3B2Q13367 1082 aa10.09□□□□□ -0.79
CBX3-206ENST00000481057 TAF1CQ15572 869 aaPredicted RBP10.09□□□□□ -0.79
CBX3-206ENST00000481057 ZNF526Q8TF50 670 aaPredicted RBP10.09□□□□□ -0.79
CBX3-206ENST00000481057 MRPL18Q9H0U6 180 aaKnown RBP10.09□□□□□ -0.79
CBX3-206ENST00000481057 C9orf172C9J069 976 aa10.08□□□□□ -0.8
CBX3-206ENST00000481057 RECKO95980 971 aa10.08□□□□□ -0.8
CBX3-206ENST00000481057 CELA3AP09093 270 aa10.08□□□□□ -0.8
CBX3-206ENST00000481057 LDLRAD1Q5T700 205 aa10.08□□□□□ -0.8
CBX3-206ENST00000481057 SV2BQ7L1I2 683 aa10.08□□□□□ -0.8
CBX3-206ENST00000481057 USP26Q9BXU7 913 aa10.08□□□□□ -0.8
CBX3-206ENST00000481057 PDGFDQ9GZP0 370 aaPredicted RBP10.08□□□□□ -0.8
CBX3-206ENST00000481057 KIAA1107Q9UPP5 1409 aa10.07□□□□□ -0.8
CBX3-206ENST00000481057 LOC100289279A0A1B0GTE1 492 aa10.07□□□□□ -0.8
CBX3-206ENST00000481057 DUOXA2Q1HG44 320 aa10.07□□□□□ -0.8
CBX3-206ENST00000481057 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.07□□□□□ -0.8
CBX3-206ENST00000481057 CDC42BPAQ5VT25 1732 aa10.07□□□□□ -0.8
CBX3-206ENST00000481057 PIK3C2BO00750 1634 aa10.07□□□□□ -0.8
CBX3-206ENST00000481057 PAGE1O75459 146 aa10.06□□□□□ -0.8
CBX3-206ENST00000481057 GDF11O95390 407 aa10.06□□□□□ -0.8
CBX3-206ENST00000481057 CYP11A1P05108 521 aa10.06□□□□□ -0.8
CBX3-206ENST00000481057 CHRNA4P43681 627 aa10.06□□□□□ -0.8
CBX3-206ENST00000481057 RBM25P49756 843 aaKnown RBP10.06□□□□□ -0.8
CBX3-206ENST00000481057 HTRA3P83110 453 aa10.06□□□□□ -0.8
CBX3-206ENST00000481057 POU4F3Q15319 338 aa10.06□□□□□ -0.8
CBX3-206ENST00000481057 CCDC85BQ15834 202 aaPredicted RBP10.06□□□□□ -0.8
CBX3-206ENST00000481057 ACAD11Q709F0 780 aa10.06□□□□□ -0.8
CBX3-206ENST00000481057 SULF2Q8IWU5 870 aa10.06□□□□□ -0.8
CBX3-206ENST00000481057 F8W735 103 aaPredicted RBP10.05□□□□□ -0.8
CBX3-206ENST00000481057 CTSBP07858 339 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 HSPA1AP0DMV8 641 aaKnown RBP10.05□□□□□ -0.8
CBX3-206ENST00000481057 HSPA1BP0DMV9 641 aaKnown RBP10.05□□□□□ -0.8
CBX3-206ENST00000481057 NME2P22392 152 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 MAOBP27338 520 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 NRG1Q02297 640 aaPredicted RBP10.05□□□□□ -0.8
CBX3-206ENST00000481057 ADGRE1Q14246 886 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 MBTPS1Q14703 1052 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 TSNAXIP1Q2TAA8 658 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 KIAA1211Q6ZU35 1233 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 CD163Q86VB7 1156 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 TMEM151AQ8N4L1 468 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 STK35Q8TDR2 534 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 CORO1BQ9BR76 489 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 NOC4LQ9BVI4 516 aaKnown RBP10.05□□□□□ -0.8
CBX3-206ENST00000481057 BACH2Q9BYV9 841 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 EFCAB6Q5THR3 1501 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 CASZ1Q86V15 1759 aa10.05□□□□□ -0.8
CBX3-206ENST00000481057 C1QTNF9BB2RNN3 333 aa10.04□□□□□ -0.8
CBX3-206ENST00000481057 ECEL1O95672 775 aa10.04□□□□□ -0.8
CBX3-206ENST00000481057 PDZD3Q86UT5 571 aa10.04□□□□□ -0.8
CBX3-206ENST00000481057 TBX22Q9Y458 520 aa10.04□□□□□ -0.8
CBX3-206ENST00000481057 DLGAP3O95886 979 aa10.03□□□□□ -0.8
CBX3-206ENST00000481057 GSTP1P09211 210 aaKnown RBP10.03□□□□□ -0.8
CBX3-206ENST00000481057 ARNTP27540 789 aa10.03□□□□□ -0.8
CBX3-206ENST00000481057 PCNX4Q63HM2 1172 aa10.03□□□□□ -0.8
CBX3-206ENST00000481057 TMEM87AQ8NBN3 555 aa10.03□□□□□ -0.8
CBX3-206ENST00000481057 WDR90Q96KV7 1748 aa10.03□□□□□ -0.8
CBX3-206ENST00000481057 RUSC1Q9BVN2 902 aa10.03□□□□□ -0.8
CBX3-206ENST00000481057 SAMM50Q9Y512 469 aa10.03□□□□□ -0.8
CBX3-206ENST00000481057 ITGB2P05107 769 aa10.02□□□□□ -0.81
CBX3-206ENST00000481057 BMP6P22004 513 aa10.02□□□□□ -0.81
CBX3-206ENST00000481057 AGGF1Q8N302 714 aaeCLIP10.02□□□□□ -0.81
CBX3-206ENST00000481057 AKTIPQ9H8T0 292 aa10.02□□□□□ -0.81
CBX3-206ENST00000481057 LAMC1P11047 1609 aa10.02□□□□□ -0.81
CBX3-206ENST00000481057 PLEKHH2Q8IVE3 1493 aa10.02□□□□□ -0.81
CBX3-206ENST00000481057 MAP3K5Q99683 1374 aa10.01□□□□□ -0.81
CBX3-206ENST00000481057 ZNF252P-AS1Q0IIN9 211 aa10.01□□□□□ -0.81
CBX3-206ENST00000481057 PLA2G4EQ3MJ16 856 aa10.01□□□□□ -0.81
CBX3-206ENST00000481057 RASIP1Q5U651 963 aa10.01□□□□□ -0.81
CBX3-206ENST00000481057 TTBK2Q6IQ55 1244 aa10.01□□□□□ -0.81
CBX3-206ENST00000481057 Q6ZS46 218 aa10.01□□□□□ -0.81
CBX3-206ENST00000481057 FAM196AQ6ZSG2 479 aa10.01□□□□□ -0.81
CBX3-206ENST00000481057 WFDC12Q8WWY7 111 aa10.01□□□□□ -0.81
CBX3-206ENST00000481057 EMILIN2Q9BXX0 1053 aa10.01□□□□□ -0.81
CBX3-206ENST00000481057 RNF208Q9H0X6 261 aa10.01□□□□□ -0.81
CBX3-206ENST00000481057 TMEM131LA2VDJ0 1609 aa10□□□□□ -0.81
CBX3-206ENST00000481057 MEGF11A6BM72 1044 aa10□□□□□ -0.81
CBX3-206ENST00000481057 ALX3O95076 343 aa10□□□□□ -0.81
CBX3-206ENST00000481057 NOS3P29474 1203 aa10□□□□□ -0.81
CBX3-206ENST00000481057 LIG3P49916 1009 aa10□□□□□ -0.81
CBX3-206ENST00000481057 HP1BP3Q5SSJ5 553 aaPredicted RBP10□□□□□ -0.81
CBX3-206ENST00000481057 TXNRD3Q86VQ6 643 aa10□□□□□ -0.81
CBX3-206ENST00000481057 TMPRSS13Q9BYE2 586 aa10□□□□□ -0.81
CBX3-206ENST00000481057 CCDC86Q9H6F5 360 aaKnown RBP10□□□□□ -0.81
CBX3-206ENST00000481057 ADGRB3O60242 1522 aa10□□□□□ -0.81
CBX3-206ENST00000481057 PLEKHG1Q9ULL1 1385 aa10□□□□□ -0.81
CBX3-206ENST00000481057 KIAA1210Q9ULL0 1709 aa9.99□□□□□ -0.81
CBX3-206ENST00000481057 IREB2P48200 963 aaKnown RBP9.99□□□□□ -0.81
CBX3-206ENST00000481057 IDI1Q13907 227 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms