RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 PLEKHH3Q7Z736 793 aa16.52■□□□□ 0.24
NDC1-202ENST00000480952 USP6NLQ92738 828 aa16.52■□□□□ 0.24
NDC1-202ENST00000480952 NSUN4Q96CB9 384 aaKnown RBP16.52■□□□□ 0.24
NDC1-202ENST00000480952 NEUROD6Q96NK8 337 aa16.52■□□□□ 0.24
NDC1-202ENST00000480952 PAGR1Q9BTK6 254 aa16.52■□□□□ 0.24
NDC1-202ENST00000480952 PRKAG2Q9UGJ0 569 aa16.52■□□□□ 0.24
NDC1-202ENST00000480952 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
NDC1-202ENST00000480952 MORN1Q5T089 497 aa16.51■□□□□ 0.23
NDC1-202ENST00000480952 GORABQ5T7V8 394 aa16.51■□□□□ 0.23
NDC1-202ENST00000480952 SPATA5Q8NB90 893 aa16.51■□□□□ 0.23
NDC1-202ENST00000480952 GTF3C2Q8WUA4 911 aaPredicted RBP16.51■□□□□ 0.23
NDC1-202ENST00000480952 APBA2Q99767 749 aa16.51■□□□□ 0.23
NDC1-202ENST00000480952 NOL10Q9BSC4 688 aaKnown RBP16.51■□□□□ 0.23
NDC1-202ENST00000480952 TRIM34Q9BYJ4 488 aa16.51■□□□□ 0.23
NDC1-202ENST00000480952 PORCNQ9H237 461 aa16.51■□□□□ 0.23
NDC1-202ENST00000480952 HMG20BQ9P0W2 317 aa16.51■□□□□ 0.23
NDC1-202ENST00000480952 COL2A1P02458 1487 aaPredicted RBP16.5■□□□□ 0.23
NDC1-202ENST00000480952 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
NDC1-202ENST00000480952 TFCP2Q12800 502 aa16.5■□□□□ 0.23
NDC1-202ENST00000480952 MFSD14CQ5VZR4 134 aa16.5■□□□□ 0.23
NDC1-202ENST00000480952 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
NDC1-202ENST00000480952 EDC3Q96F86 508 aaKnown RBP16.5■□□□□ 0.23
NDC1-202ENST00000480952 DHX36Q9H2U1 1008 aaKnown RBP16.5■□□□□ 0.23
NDC1-202ENST00000480952 LOC285556D6RIA3 1793 aa16.5■□□□□ 0.23
NDC1-202ENST00000480952 LAMA2P24043 3122 aaKnown RBP16.49■□□□□ 0.23
NDC1-202ENST00000480952 GLRX3O76003 335 aaKnown RBP16.49■□□□□ 0.23
NDC1-202ENST00000480952 JAG1P78504 1218 aa16.49■□□□□ 0.23
NDC1-202ENST00000480952 PI16Q6UXB8 463 aa16.49■□□□□ 0.23
NDC1-202ENST00000480952 CRACR2BQ8N4Y2 399 aaPredicted RBP16.49■□□□□ 0.23
NDC1-202ENST00000480952 CDX2Q99626 313 aaPredicted RBP16.49■□□□□ 0.23
NDC1-202ENST00000480952 SMC4Q9NTJ3 1288 aa16.49■□□□□ 0.23
NDC1-202ENST00000480952 LRP2BPQ9P2M1 347 aa16.49■□□□□ 0.23
NDC1-202ENST00000480952 ZNF521Q96K83 1311 aa16.48■□□□□ 0.23
NDC1-202ENST00000480952 CNGA1P29973 690 aa16.48■□□□□ 0.23
NDC1-202ENST00000480952 MAP2K5Q13163 448 aa16.48■□□□□ 0.23
NDC1-202ENST00000480952 ALDH1L2Q3SY69 923 aa16.48■□□□□ 0.23
NDC1-202ENST00000480952 WDR78Q5VTH9 848 aa16.48■□□□□ 0.23
NDC1-202ENST00000480952 FOXP4Q8IVH2 680 aaPredicted RBP16.48■□□□□ 0.23
NDC1-202ENST00000480952 GINM1Q9NU53 330 aa16.48■□□□□ 0.23
NDC1-202ENST00000480952 DDX20Q9UHI6 824 aaKnown RBP16.48■□□□□ 0.23
NDC1-202ENST00000480952 VCANP13611 3396 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 PLXNB2O15031 1838 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 E9PSI1 815 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 GDF11O95390 407 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 BAG3O95817 575 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 CCNA1P78396 465 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 MAFAQ8NHW3 353 aaPredicted RBP16.47■□□□□ 0.23
NDC1-202ENST00000480952 TGFBRAP1Q8WUH2 860 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 SEMA6BQ9H3T3 888 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 EMILIN3Q9NT22 766 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 AATFQ9NY61 560 aaKnown RBP eCLIP16.47■□□□□ 0.23
NDC1-202ENST00000480952 NDUFB9Q9Y6M9 179 aa16.47■□□□□ 0.23
NDC1-202ENST00000480952 SRGAP3O43295 1099 aa16.46■□□□□ 0.23
NDC1-202ENST00000480952 MSCO60682 206 aa16.46■□□□□ 0.23
NDC1-202ENST00000480952 PLCG2P16885 1265 aa16.46■□□□□ 0.23
NDC1-202ENST00000480952 ATP2B2Q01814 1243 aa16.46■□□□□ 0.23
NDC1-202ENST00000480952 SHROOM1Q2M3G4 852 aaPredicted RBP16.46■□□□□ 0.23
NDC1-202ENST00000480952 POTEEQ6S8J3 1075 aa16.46■□□□□ 0.23
NDC1-202ENST00000480952 MAPKAPK5Q8IW41 473 aa16.46■□□□□ 0.23
NDC1-202ENST00000480952 LPAR1Q92633 364 aa16.46■□□□□ 0.23
NDC1-202ENST00000480952 PRDM6Q9NQX0 595 aa16.46■□□□□ 0.23
NDC1-202ENST00000480952 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.23
NDC1-202ENST00000480952 DNAH12Q6ZR08 3092 aa16.46■□□□□ 0.23
NDC1-202ENST00000480952 DNM1LO00429 736 aa16.45■□□□□ 0.22
NDC1-202ENST00000480952 RTP1P59025 263 aa16.45■□□□□ 0.22
NDC1-202ENST00000480952 SHHQ15465 462 aa16.45■□□□□ 0.22
NDC1-202ENST00000480952 NAA16Q6N069 864 aaPredicted RBP16.45■□□□□ 0.22
NDC1-202ENST00000480952 METTL16Q86W50 562 aaKnown RBP16.45■□□□□ 0.22
NDC1-202ENST00000480952 DNAJC18Q9H819 358 aa16.45■□□□□ 0.22
NDC1-202ENST00000480952 FLRT1Q9NZU1 646 aa16.45■□□□□ 0.22
NDC1-202ENST00000480952 PALD1Q9ULE6 856 aa16.45■□□□□ 0.22
NDC1-202ENST00000480952 ZBTB21Q9ULJ3 1066 aa16.45■□□□□ 0.22
NDC1-202ENST00000480952 NOB1Q9ULX3 412 aaKnown RBP16.45■□□□□ 0.22
NDC1-202ENST00000480952 ATP11BQ9Y2G3 1177 aa16.45■□□□□ 0.22
NDC1-202ENST00000480952 SLC15A5A6NIM6 579 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 USP17L15C9J2P7 530 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 USP17L13C9JLJ4 530 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 USP17L11C9JVI0 530 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 USP17L18D6R9N7 530 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 USP17L22D6RA61 530 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 USP17L17D6RBQ6 530 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 USP17L19D6RCP7 530 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 USP17L20D6RJB6 530 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 ARID4AP29374 1257 aaPredicted RBP16.44■□□□□ 0.22
NDC1-202ENST00000480952 USP17L24Q0WX57 530 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 MEIS3Q99687 375 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
NDC1-202ENST00000480952 PRDM5Q9NQX1 630 aaPredicted RBP16.44■□□□□ 0.22
NDC1-202ENST00000480952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.44■□□□□ 0.22
NDC1-202ENST00000480952 IVNS1ABPQ9Y6Y0 642 aa16.44■□□□□ 0.22
NDC1-202ENST00000480952 CNMDO75829 334 aa16.43■□□□□ 0.22
NDC1-202ENST00000480952 HLA-DOAP06340 250 aa16.43■□□□□ 0.22
NDC1-202ENST00000480952 UQCRFS1P1P0C7P4 283 aa16.43■□□□□ 0.22
NDC1-202ENST00000480952 PTPREP23469 700 aa16.43■□□□□ 0.22
NDC1-202ENST00000480952 CYP2C19P33261 490 aa16.43■□□□□ 0.22
NDC1-202ENST00000480952 MCAMP43121 646 aa16.43■□□□□ 0.22
NDC1-202ENST00000480952 PPP4CP60510 307 aa16.43■□□□□ 0.22
NDC1-202ENST00000480952 ZYXQ15942 572 aaKnown RBP16.43■□□□□ 0.22
NDC1-202ENST00000480952 ATF7IPQ6VMQ6 1270 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms