RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 MYH8P13535 1937 aa18.07■□□□□ 0.48
ABCF3-213ENST00000480539 PHIPQ8WWQ0 1821 aa18.07■□□□□ 0.48
ABCF3-213ENST00000480539 IRF6O14896 467 aa18.06■□□□□ 0.48
ABCF3-213ENST00000480539 GH2P01242 217 aa18.06■□□□□ 0.48
ABCF3-213ENST00000480539 CDK8P49336 464 aa18.06■□□□□ 0.48
ABCF3-213ENST00000480539 PPATQ06203 517 aa18.06■□□□□ 0.48
ABCF3-213ENST00000480539 CERKLQ49MI3 558 aaPredicted RBP18.06■□□□□ 0.48
ABCF3-213ENST00000480539 RUFY2Q8WXA3 655 aa18.06■□□□□ 0.48
ABCF3-213ENST00000480539 SWAP70Q9UH65 585 aa18.06■□□□□ 0.48
ABCF3-213ENST00000480539 ZHX2Q9Y6X8 837 aa18.06■□□□□ 0.48
ABCF3-213ENST00000480539 ZMYM6O95789 1325 aa18.05■□□□□ 0.48
ABCF3-213ENST00000480539 MANSC4A6NHS7 340 aaPredicted RBP18.05■□□□□ 0.48
ABCF3-213ENST00000480539 MPHOSPH10O00566 681 aaKnown RBP18.05■□□□□ 0.48
ABCF3-213ENST00000480539 PPARAQ07869 468 aa18.05■□□□□ 0.48
ABCF3-213ENST00000480539 LAMA4Q16363 1823 aa18.05■□□□□ 0.48
ABCF3-213ENST00000480539 TRIM75PA6NK02 468 aa18.04■□□□□ 0.48
ABCF3-213ENST00000480539 SGSM2O43147 1006 aa18.04■□□□□ 0.48
ABCF3-213ENST00000480539 FGAP02671 866 aa18.04■□□□□ 0.48
ABCF3-213ENST00000480539 ASNSP08243 561 aa18.04■□□□□ 0.48
ABCF3-213ENST00000480539 CTDSPL2Q05D32 466 aa18.04■□□□□ 0.48
ABCF3-213ENST00000480539 SREBF2Q12772 1141 aa18.04■□□□□ 0.48
ABCF3-213ENST00000480539 ALX1Q15699 326 aa18.04■□□□□ 0.48
ABCF3-213ENST00000480539 ABCB5Q2M3G0 1257 aa18.04■□□□□ 0.48
ABCF3-213ENST00000480539 CCL15-CCL14A0A0B4J2E2 113 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 USP17L5A8MUK1 530 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 CDC45O75419 566 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 PRDM1O75626 825 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 HSPA1AP0DMV8 641 aaKnown RBP18.03■□□□□ 0.48
ABCF3-213ENST00000480539 HSPA1BP0DMV9 641 aaKnown RBP18.03■□□□□ 0.48
ABCF3-213ENST00000480539 AKR1B1P15121 316 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 GTF2A2P52657 109 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 MAP2K1Q02750 393 aaPredicted RBP18.03■□□□□ 0.48
ABCF3-213ENST00000480539 SNAPC2Q13487 334 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 RAB3GAP1Q15042 981 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 CCL15Q16663 113 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 MS4A4AQ96JQ5 239 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 KCNH4Q9UQ05 1017 aa18.03■□□□□ 0.48
ABCF3-213ENST00000480539 HAND2P61296 217 aa18.02■□□□□ 0.48
ABCF3-213ENST00000480539 CLEC10AQ8IUN9 316 aa18.02■□□□□ 0.48
ABCF3-213ENST00000480539 BRI3BPQ8WY22 251 aa18.02■□□□□ 0.48
ABCF3-213ENST00000480539 DSCC1Q9BVC3 393 aa18.02■□□□□ 0.48
ABCF3-213ENST00000480539 MKNK2Q9HBH9 465 aa18.02■□□□□ 0.48
ABCF3-213ENST00000480539 CABP5Q9NP86 173 aa18.02■□□□□ 0.48
ABCF3-213ENST00000480539 WBP1LQ9NX94 342 aa18.02■□□□□ 0.48
ABCF3-213ENST00000480539 AFG3L2Q9Y4W6 797 aa18.02■□□□□ 0.48
ABCF3-213ENST00000480539 PTPRFP10586 1907 aa18.02■□□□□ 0.47
ABCF3-213ENST00000480539 IGF2BP3O00425 579 aaKnown RBP eCLIP18.01■□□□□ 0.47
ABCF3-213ENST00000480539 RASA1P20936 1047 aa18.01■□□□□ 0.47
ABCF3-213ENST00000480539 SEPT2Q15019 361 aa18.01■□□□□ 0.47
ABCF3-213ENST00000480539 ESYT1Q9BSJ8 1104 aa18.01■□□□□ 0.47
ABCF3-213ENST00000480539 AS3MTQ9HBK9 375 aa18.01■□□□□ 0.47
ABCF3-213ENST00000480539 GINM1Q9NU53 330 aa18.01■□□□□ 0.47
ABCF3-213ENST00000480539 TAOK2Q9UL54 1235 aa18.01■□□□□ 0.47
ABCF3-213ENST00000480539 LOC285556D6RIA3 1793 aa18.01■□□□□ 0.47
ABCF3-213ENST00000480539 PCNTO95613 3336 aa18.01■□□□□ 0.47
ABCF3-213ENST00000480539 SLC3A2P08195 630 aaKnown RBP18■□□□□ 0.47
ABCF3-213ENST00000480539 CETPP11597 493 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 GUCY1A2P33402 732 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 PTH1RQ03431 593 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 SPP2Q13103 211 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 DGKZQ13574 1117 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 MTMR2Q13614 643 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 CASC1Q6TDU7 716 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 IFNL1Q8IU54 200 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 TBC1D10CQ8IV04 446 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 ZNF280CQ8ND82 737 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 BEGAINQ9BUH8 593 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 NBPF3Q9H094 633 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 TSKSQ9UJT2 592 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 ANAPC4Q9UJX5 808 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 TACC3Q9Y6A5 838 aa18■□□□□ 0.47
ABCF3-213ENST00000480539 GREB1LQ9C091 1923 aaPredicted RBP18■□□□□ 0.47
ABCF3-213ENST00000480539 A0A0G2JLL6 359 aaPredicted RBP17.99■□□□□ 0.47
ABCF3-213ENST00000480539 CXCL11O14625 94 aa17.99■□□□□ 0.47
ABCF3-213ENST00000480539 TM4SF4P48230 202 aa17.99■□□□□ 0.47
ABCF3-213ENST00000480539 PDE4BQ07343 736 aa17.99■□□□□ 0.47
ABCF3-213ENST00000480539 ZYXQ15942 572 aaKnown RBP17.99■□□□□ 0.47
ABCF3-213ENST00000480539 GADL1Q6ZQY3 521 aa17.99■□□□□ 0.47
ABCF3-213ENST00000480539 TMEM179Q6ZVK1 233 aa17.99■□□□□ 0.47
ABCF3-213ENST00000480539 PRRT2Q7Z6L0 340 aaPredicted RBP17.99■□□□□ 0.47
ABCF3-213ENST00000480539 REM2Q8IYK8 340 aaPredicted RBP17.99■□□□□ 0.47
ABCF3-213ENST00000480539 PTPN18Q99952 460 aa17.99■□□□□ 0.47
ABCF3-213ENST00000480539 TBC1D2Q9BYX2 928 aa17.99■□□□□ 0.47
ABCF3-213ENST00000480539 INCENPQ9NQS7 918 aa17.99■□□□□ 0.47
ABCF3-213ENST00000480539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.99■□□□□ 0.47
ABCF3-213ENST00000480539 TESPA1A2RU30 521 aaPredicted RBP17.98■□□□□ 0.47
ABCF3-213ENST00000480539 BTBD19C9JJ37 291 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 FOXN1O15353 648 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 TRPA1O75762 1119 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 HMGCS2P54868 508 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 ICA1Q05084 483 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 MOGSQ13724 837 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 FAM43AQ8N2R8 423 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 CCDC17Q96LX7 622 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 FEZ1Q99689 392 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 WDR18Q9BV38 432 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 ZNF287Q9HBT7 754 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 TOMM22Q9NS69 142 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 RNF186Q9NXI6 227 aa17.98■□□□□ 0.47
ABCF3-213ENST00000480539 NEDD4P46934 1319 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms