RNA–Protein interactions for RNA: ENST00000480060.5

CCHCR1-213, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-213ENST00000480060 NEK4P51957 841 aa12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 RASA3Q14644 834 aa12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 RRP12Q5JTH9 1297 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 RUFY3Q7L099 469 aa12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 APOBEC3FQ8IUX4 373 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 FOXP4Q8IVH2 680 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 DYNLL2Q96FJ2 89 aa12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 TRIM34Q9BYJ4 488 aa12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 MKNK2Q9HBH9 465 aa12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 INCENPQ9NQS7 918 aa12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 PI4KBQ9UBF8 816 aa12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 ASTN2O75129 1339 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-213ENST00000480060 MKI67P46013 3256 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 FGRP09769 529 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 RPS6KB1P23443 525 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 ANP32AP39687 249 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 CDK8P49336 464 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 EVX2Q03828 476 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 NOM1Q5C9Z4 860 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 C16orf86Q6ZW13 317 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 DHX32Q7L7V1 743 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 ZNF444Q8N0Y2 327 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 CRACR2BQ8N4Y2 399 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 ZNF296Q8WUU4 475 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 ESR2Q92731 530 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 DCPSQ96C86 337 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 TMEM39BQ9GZU3 492 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 EHD4Q9H223 541 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 PDRG1Q9NUG6 133 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 GGA3Q9NZ52 723 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 SERPINB13Q9UIV8 391 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 TAOK2Q9UL54 1235 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 TACC3Q9Y6A5 838 aa12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 MYO5AQ9Y4I1 1855 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-213ENST00000480060 B4E1Z4 1266 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 ORC4O43929 436 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 ST18O60284 1047 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 PRDM1O75626 825 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 CPA1P15085 419 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 MCM5P33992 734 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 NT5C2P49902 561 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 GABPAQ06546 454 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 FBXO46Q6PJ61 603 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 DEFB129Q9H1M3 183 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 SCAF8Q9UPN6 1271 aaKnown RBP12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 ZNF646O15015 1829 aaPredicted RBP12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 NEDD4P46934 1319 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 PITPNM2Q9BZ72 1349 aa12.52□□□□□ -0.41
CCHCR1-213ENST00000480060 RANBP6O60518 1105 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 KDM4AO75164 1064 aa12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 FGD1P98174 961 aa12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 EXOSC10Q01780 885 aaKnown RBP12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 MB21D2Q8IYB1 491 aaPredicted RBP12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 ZSWIM5Q9P217 1185 aa12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 PPP2R3BQ9Y5P8 575 aa12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 ATRNL1Q5VV63 1379 aa12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 ROBO3Q96MS0 1386 aa12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 PSME4Q14997 1843 aa12.51□□□□□ -0.41
CCHCR1-213ENST00000480060 MYH7P12883 1935 aa12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 TSPY2A6NKD2 308 aa12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 PRC1O43663 620 aa12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 ANKRD1Q15327 319 aa12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 CYB5R4Q7L1T6 521 aa12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 CHST3Q7LGC8 479 aa12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 METTL16Q86W50 562 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 SULF1Q8IWU6 871 aa12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 SLC44A5Q8NCS7 719 aa12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 HOOK2Q96ED9 719 aa12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 ALDH8A1Q9H2A2 487 aaPredicted RBP12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 HERC5Q9UII4 1024 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 COL2A1P02458 1487 aaPredicted RBP12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 MYH2Q9UKX2 1941 aa12.5□□□□□ -0.41
CCHCR1-213ENST00000480060 WDR19Q8NEZ3 1342 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 ADM5C9JUS6 153 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 GPR25O00155 361 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 TBC1D12O60347 775 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 TBC1D8O95759 1140 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 RASA1P20936 1047 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 FKBP1BP68106 108 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 TFAP4Q01664 338 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 COL9A3Q14050 684 aaPredicted RBP12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 SART3Q15020 963 aaKnown RBP12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 FAM47AQ5JRC9 791 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 Q6ZUG5 572 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 IQCA1Q86XH1 822 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 RASAL3Q86YV0 1011 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 SNX21Q969T3 373 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 TMEM87BQ96K49 555 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 TCEANC2Q96MN5 208 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 TEPSINQ96N21 525 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 TTC14Q96N46 770 aa12.49□□□□□ -0.41
CCHCR1-213ENST00000480060 ERICH2A1L162 156 aa12.48□□□□□ -0.41
CCHCR1-213ENST00000480060 IFIT3O14879 490 aaKnown RBP12.48□□□□□ -0.41
CCHCR1-213ENST00000480060 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
CCHCR1-213ENST00000480060 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms