RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 VSNL1P62760 191 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 DDR1Q08345 913 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 NEXNQ0ZGT2 675 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 CWF19L2Q2TBE0 894 aaKnown RBP12.36□□□□□ -0.43
CHD6-208ENST00000480022 CFAP100Q494V2 611 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 CPLX2Q6PUV4 134 aaKnown RBP12.36□□□□□ -0.43
CHD6-208ENST00000480022 ZNF34Q8IZ26 560 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 PRPF38AQ8NAV1 312 aaKnown RBP12.36□□□□□ -0.43
CHD6-208ENST00000480022 CTCFLQ8NI51 663 aaPredicted RBP12.36□□□□□ -0.43
CHD6-208ENST00000480022 ZNF396Q96N95 335 aaPredicted RBP12.36□□□□□ -0.43
CHD6-208ENST00000480022 ISCA1Q9BUE6 129 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 CDC23Q9UJX2 597 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 SCN7AQ01118 1682 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 MYH15Q9Y2K3 1946 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 LRRIQ3A6PVS8 624 aaPredicted RBP12.36□□□□□ -0.43
CHD6-208ENST00000480022 SLC27A2O14975 620 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 ATP1A3P13637 1013 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 COL9A3Q14050 684 aaPredicted RBP12.36□□□□□ -0.43
CHD6-208ENST00000480022 ATL3Q6DD88 541 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 LINS1Q8NG48 757 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 USP28Q96RU2 1077 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 SH3BP1Q9Y3L3 701 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 PXDNLA1KZ92 1463 aa12.36□□□□□ -0.43
CHD6-208ENST00000480022 STX10O60499 249 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 AARSP49588 968 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHD6-208ENST00000480022 VIPAS39Q9H9C1 493 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 NIP7Q9Y221 180 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHD6-208ENST00000480022 BCORQ6W2J9 1755 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 QSER1Q2KHR3 1735 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 ARFGEF2Q9Y6D5 1785 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 NEURL1BA8MQ27 555 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 SHOX2O60902 331 aaPredicted RBP12.35□□□□□ -0.43
CHD6-208ENST00000480022 PRPF6O94906 941 aaKnown RBP12.35□□□□□ -0.43
CHD6-208ENST00000480022 RHOXF2BP0C7M4 288 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 RDXP35241 583 aaKnown RBP12.35□□□□□ -0.43
CHD6-208ENST00000480022 MSL1Q68DK7 614 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 BICDL1Q6ZP65 573 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 TOGARAM2Q6ZUX3 1019 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 JMYQ8N9B5 988 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 DPF2Q92785 391 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 MAP4K1Q92918 833 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 RHOXF2Q9BQY4 288 aa12.35□□□□□ -0.43
CHD6-208ENST00000480022 BIN1O00499 593 aa12.34□□□□□ -0.43
CHD6-208ENST00000480022 TRIM28Q13263 835 aaKnown RBP12.34□□□□□ -0.43
CHD6-208ENST00000480022 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
CHD6-208ENST00000480022 NFIXQ14938 502 aa12.34□□□□□ -0.43
CHD6-208ENST00000480022 KARSQ15046 597 aaKnown RBP12.34□□□□□ -0.43
CHD6-208ENST00000480022 NLRP10Q86W26 655 aa12.34□□□□□ -0.43
CHD6-208ENST00000480022 TUBB2BQ9BVA1 445 aa12.34□□□□□ -0.43
CHD6-208ENST00000480022 VEZTQ9HBM0 779 aa12.34□□□□□ -0.43
CHD6-208ENST00000480022 MCM8Q9UJA3 840 aa12.34□□□□□ -0.43
CHD6-208ENST00000480022 SYF2O95926 243 aaKnown RBP12.34□□□□□ -0.43
CHD6-208ENST00000480022 C11orf91Q3C1V1 193 aa12.34□□□□□ -0.43
CHD6-208ENST00000480022 NLGN1Q8N2Q7 840 aa12.34□□□□□ -0.43
CHD6-208ENST00000480022 FAXDC2Q96IV6 333 aa12.34□□□□□ -0.43
CHD6-208ENST00000480022 ALDH1L1O75891 902 aa12.33□□□□□ -0.43
CHD6-208ENST00000480022 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.43
CHD6-208ENST00000480022 UBTFL1P0CB47 393 aaPredicted RBP12.33□□□□□ -0.43
CHD6-208ENST00000480022 TM4SF1P30408 202 aa12.33□□□□□ -0.43
CHD6-208ENST00000480022 NAA16Q6N069 864 aaPredicted RBP12.33□□□□□ -0.43
CHD6-208ENST00000480022 SETDB2Q96T68 719 aa12.33□□□□□ -0.43
CHD6-208ENST00000480022 HSD3B7Q9H2F3 369 aa12.33□□□□□ -0.43
CHD6-208ENST00000480022 CDHR2Q9BYE9 1310 aa12.33□□□□□ -0.43
CHD6-208ENST00000480022 A0A1B0GVL5 298 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 ERCC3P19447 782 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 NF2P35240 595 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 GCKRQ14397 625 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 IGSF22Q8N9C0 903 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 SLC16A10Q8TF71 515 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 CWC25Q9NXE8 425 aaPredicted RBP12.33□□□□□ -0.44
CHD6-208ENST00000480022 CAPN7Q9Y6W3 813 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 TTC36A6NLP5 189 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 CHUKO15111 745 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 BIRC2Q13490 618 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 SUSD4Q5VX71 490 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 ADALQ6DHV7 355 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 N4BP2L2Q92802 583 aaPredicted RBP12.33□□□□□ -0.44
CHD6-208ENST00000480022 PCDHA7Q9UN72 937 aa12.33□□□□□ -0.44
CHD6-208ENST00000480022 A0A1W2PQ27 194 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 A0A1W2PQ64 194 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 A0A1W2PQD8 194 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 SHTN1A0MZ66 631 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 TMEM232C9JQI7 657 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 H0YHG0 523 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 NEBLO76041 1014 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 GCFC2P16383 781 aaKnown RBP12.32□□□□□ -0.44
CHD6-208ENST00000480022 NDUFA8P51970 172 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 PARP10Q53GL7 1025 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 PPP1R42Q7Z4L9 355 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 IRAK1P51617 712 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 POLA2Q14181 598 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 TEX11Q8IYF3 940 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 TMTC2Q8N394 836 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 PDILTQ8N807 584 aa12.32□□□□□ -0.44
CHD6-208ENST00000480022 ZKSCAN4Q969J2 545 aaPredicted RBP12.32□□□□□ -0.44
CHD6-208ENST00000480022 CARMIL3Q8ND23 1372 aa12.31□□□□□ -0.44
CHD6-208ENST00000480022 SARNPP82979 210 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms