RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 IRX3P78415 501 aaPredicted RBP16.29■□□□□ 0.2
ABCF1-206ENST00000479542 TTC39AQ5SRH9 613 aa16.29■□□□□ 0.2
ABCF1-206ENST00000479542 TGFBRAP1Q8WUH2 860 aa16.29■□□□□ 0.2
ABCF1-206ENST00000479542 P2RX7Q99572 595 aaKnown RBP16.29■□□□□ 0.2
ABCF1-206ENST00000479542 GDF15Q99988 308 aa16.29■□□□□ 0.2
ABCF1-206ENST00000479542 NUDT12Q9BQG2 462 aa16.29■□□□□ 0.2
ABCF1-206ENST00000479542 NBPF3Q9H094 633 aa16.29■□□□□ 0.2
ABCF1-206ENST00000479542 DNAJC18Q9H819 358 aa16.29■□□□□ 0.2
ABCF1-206ENST00000479542 MTMR2Q13614 643 aa16.28■□□□□ 0.2
ABCF1-206ENST00000479542 ZKSCAN2Q63HK3 967 aa16.28■□□□□ 0.2
ABCF1-206ENST00000479542 USP6NLQ92738 828 aa16.28■□□□□ 0.2
ABCF1-206ENST00000479542 C12orf42Q96LP6 360 aa16.28■□□□□ 0.2
ABCF1-206ENST00000479542 DBNDD2Q9BQY9 259 aa16.28■□□□□ 0.2
ABCF1-206ENST00000479542 RBPJLQ9UBG7 517 aa16.28■□□□□ 0.2
ABCF1-206ENST00000479542 LAMA3Q16787 3333 aa16.28■□□□□ 0.2
ABCF1-206ENST00000479542 SIPA1L1O43166 1804 aa16.27■□□□□ 0.2
ABCF1-206ENST00000479542 HLA-DOAP06340 250 aa16.27■□□□□ 0.2
ABCF1-206ENST00000479542 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
ABCF1-206ENST00000479542 TATDN1Q6P1N9 297 aa16.27■□□□□ 0.2
ABCF1-206ENST00000479542 EHD4Q9H223 541 aa16.27■□□□□ 0.2
ABCF1-206ENST00000479542 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.2
ABCF1-206ENST00000479542 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 MAST2Q6P0Q8 1798 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 ERVK-9P63128 1117 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 ERVK-24P63145 666 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 JAG1P78504 1218 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 DIEXFQ68CQ4 756 aaKnown RBP16.26■□□□□ 0.19
ABCF1-206ENST00000479542 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 LBX2Q6XYB7 198 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 ADGRA1Q86SQ6 560 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 MAPKAPK5Q8IW41 473 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 CRACR2BQ8N4Y2 399 aaPredicted RBP16.26■□□□□ 0.19
ABCF1-206ENST00000479542 TMEM57Q8N5G2 664 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 TRIB2Q92519 343 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
ABCF1-206ENST00000479542 TRIM34Q9BYJ4 488 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 TXNRD2Q9NNW7 524 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 SNRKQ9NRH2 765 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 TAOK2Q9UL54 1235 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 PALD1Q9ULE6 856 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 RABGAP1Q9Y3P9 1069 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 PLXNB2O15031 1838 aa16.26■□□□□ 0.19
ABCF1-206ENST00000479542 SURF6O75683 361 aaKnown RBP16.25■□□□□ 0.19
ABCF1-206ENST00000479542 ZAP70P43403 619 aa16.25■□□□□ 0.19
ABCF1-206ENST00000479542 USP14P54578 494 aa16.25■□□□□ 0.19
ABCF1-206ENST00000479542 MORN1Q5T089 497 aa16.25■□□□□ 0.19
ABCF1-206ENST00000479542 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
ABCF1-206ENST00000479542 EMILIN3Q9NT22 766 aa16.25■□□□□ 0.19
ABCF1-206ENST00000479542 STAP2Q9UGK3 403 aa16.25■□□□□ 0.19
ABCF1-206ENST00000479542 COL6A1P12109 1028 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 RGS2P41220 211 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 OS9Q13438 667 aaPredicted RBP16.24■□□□□ 0.19
ABCF1-206ENST00000479542 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 Q3C1V9 767 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 LRIT3Q3SXY7 679 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 TTC6Q86TZ1 520 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 MIER1Q8N108 512 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 DIS3LQ8TF46 1054 aaKnown RBP16.24■□□□□ 0.19
ABCF1-206ENST00000479542 KIAA1683Q9H0B3 1180 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 C11orf49Q9H6J7 331 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 DBNLQ9UJU6 430 aaKnown RBP16.24■□□□□ 0.19
ABCF1-206ENST00000479542 TNNQ9UQP3 1299 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 CDK5RAP2Q96SN8 1893 aa16.24■□□□□ 0.19
ABCF1-206ENST00000479542 USP17L15C9J2P7 530 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 USP17L13C9JLJ4 530 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 USP17L11C9JVI0 530 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 USP17L18D6R9N7 530 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 USP17L22D6RA61 530 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 USP17L17D6RBQ6 530 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 USP17L19D6RCP7 530 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 USP17L20D6RJB6 530 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 GLRX3O76003 335 aaKnown RBP16.23■□□□□ 0.19
ABCF1-206ENST00000479542 CYP7A1P22680 504 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 CCNA1P78396 465 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 USP17L24Q0WX57 530 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 TRIM32Q13049 653 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 GPR142Q7Z601 462 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 PLEKHH3Q7Z736 793 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 PIH1D3Q9NQM4 214 aaKnown RBP16.23■□□□□ 0.19
ABCF1-206ENST00000479542 SERPINB13Q9UIV8 391 aa16.23■□□□□ 0.19
ABCF1-206ENST00000479542 ALPK3Q96L96 1907 aa16.22■□□□□ 0.19
ABCF1-206ENST00000479542 HOXC6P09630 235 aa16.22■□□□□ 0.19
ABCF1-206ENST00000479542 PRKAR2AP13861 404 aaKnown RBP16.22■□□□□ 0.19
ABCF1-206ENST00000479542 CYP2B6P20813 491 aa16.22■□□□□ 0.19
ABCF1-206ENST00000479542 CACNB2Q08289 660 aaPredicted RBP16.22■□□□□ 0.19
ABCF1-206ENST00000479542 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
ABCF1-206ENST00000479542 LHX8Q68G74 356 aa16.22■□□□□ 0.19
ABCF1-206ENST00000479542 POTEEQ6S8J3 1075 aa16.22■□□□□ 0.19
ABCF1-206ENST00000479542 EAF2Q96CJ1 260 aaPredicted RBP16.22■□□□□ 0.19
ABCF1-206ENST00000479542 APBA2Q99767 749 aa16.22■□□□□ 0.19
ABCF1-206ENST00000479542 ZKSCAN1P17029 563 aaPredicted RBP16.21■□□□□ 0.19
ABCF1-206ENST00000479542 MAP2K5Q13163 448 aa16.21■□□□□ 0.19
ABCF1-206ENST00000479542 CATSPERGQ6ZRH7 1159 aa16.21■□□□□ 0.19
ABCF1-206ENST00000479542 ERC1Q8IUD2 1116 aa16.21■□□□□ 0.19
ABCF1-206ENST00000479542 CCAR1Q8IX12 1150 aaKnown RBP16.21■□□□□ 0.19
ABCF1-206ENST00000479542 PORCNQ9H237 461 aa16.21■□□□□ 0.19
ABCF1-206ENST00000479542 MSCO60682 206 aa16.2■□□□□ 0.18
ABCF1-206ENST00000479542 GDF11O95390 407 aa16.2■□□□□ 0.18
ABCF1-206ENST00000479542 GH2P01242 217 aa16.2■□□□□ 0.18
ABCF1-206ENST00000479542 DYNLL1P63167 89 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms