RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 FOXP4Q8IVH2 680 aaPredicted RBP16.18■□□□□ 0.18
VCL-205ENST00000478896 WDR18Q9BV38 432 aa16.18■□□□□ 0.18
VCL-205ENST00000478896 PIH1D3Q9NQM4 214 aaKnown RBP16.18■□□□□ 0.18
VCL-205ENST00000478896 TLR7Q9NYK1 1049 aaKnown RBP16.18■□□□□ 0.18
VCL-205ENST00000478896 RBM27Q9P2N5 1060 aaKnown RBP16.18■□□□□ 0.18
VCL-205ENST00000478896 DBNLQ9UJU6 430 aaKnown RBP16.18■□□□□ 0.18
VCL-205ENST00000478896 C19orf81C9J6K1 198 aa16.17■□□□□ 0.18
VCL-205ENST00000478896 USP17L10C9JJH3 530 aa16.17■□□□□ 0.18
VCL-205ENST00000478896 USP5P45974 858 aa16.17■□□□□ 0.18
VCL-205ENST00000478896 DYNLL1P63167 89 aaKnown RBP16.17■□□□□ 0.18
VCL-205ENST00000478896 ZBTB21Q9ULJ3 1066 aa16.17■□□□□ 0.18
VCL-205ENST00000478896 NOP58Q9Y2X3 529 aaKnown RBP16.17■□□□□ 0.18
VCL-205ENST00000478896 SHROOM1Q2M3G4 852 aaPredicted RBP16.16■□□□□ 0.18
VCL-205ENST00000478896 CERS3Q8IU89 383 aa16.16■□□□□ 0.18
VCL-205ENST00000478896 CCAR1Q8IX12 1150 aaKnown RBP16.16■□□□□ 0.18
VCL-205ENST00000478896 MIGA1Q8NAN2 632 aa16.16■□□□□ 0.18
VCL-205ENST00000478896 GINM1Q9NU53 330 aa16.16■□□□□ 0.18
VCL-205ENST00000478896 MORF4L1Q9UBU8 362 aa16.16■□□□□ 0.18
VCL-205ENST00000478896 PLXNB2O15031 1838 aa16.16■□□□□ 0.18
VCL-205ENST00000478896 ZBTB7BO15156 539 aaPredicted RBP16.15■□□□□ 0.18
VCL-205ENST00000478896 RLBP1P12271 317 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 CYP2B6P20813 491 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 HOXA7P31268 230 aaPredicted RBP16.15■□□□□ 0.18
VCL-205ENST00000478896 HERVK_113P62684 666 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 PDE3AQ14432 1141 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 NECAB2Q7Z6G3 386 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 MAGEB6Q8N7X4 407 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 GPRC5AQ8NFJ5 357 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 SOCS4Q8WXH5 440 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 EAF2Q96CJ1 260 aaPredicted RBP16.15■□□□□ 0.18
VCL-205ENST00000478896 PAWRQ96IZ0 340 aaKnown RBP16.15■□□□□ 0.18
VCL-205ENST00000478896 FEZ1Q99689 392 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 CRISPLD2Q9H0B8 497 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 CWC22Q9HCG8 908 aaKnown RBP16.15■□□□□ 0.18
VCL-205ENST00000478896 HMX1Q9NP08 348 aaPredicted RBP16.15■□□□□ 0.18
VCL-205ENST00000478896 NDUFB9Q9Y6M9 179 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 ALPK3Q96L96 1907 aa16.15■□□□□ 0.18
VCL-205ENST00000478896 NAV1Q8NEY1 1877 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 JAG1P78504 1218 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 MAP3K12Q12852 859 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 ZYXQ15942 572 aaKnown RBP16.14■□□□□ 0.17
VCL-205ENST00000478896 AACSQ86V21 672 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 METTL16Q86W50 562 aaKnown RBP16.14■□□□□ 0.17
VCL-205ENST00000478896 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 DIS3LQ8TF46 1054 aaKnown RBP16.14■□□□□ 0.17
VCL-205ENST00000478896 GTF3C2Q8WUA4 911 aaPredicted RBP16.14■□□□□ 0.17
VCL-205ENST00000478896 P2RX7Q99572 595 aaKnown RBP16.14■□□□□ 0.17
VCL-205ENST00000478896 NUDT12Q9BQG2 462 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 PAGR1Q9BTK6 254 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 TXNRD2Q9NNW7 524 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 GJD2Q9UKL4 321 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 EXOC6BQ9Y2D4 811 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 RPTORQ8N122 1335 aa16.14■□□□□ 0.17
VCL-205ENST00000478896 DDX60LQ5H9U9 1706 aaKnown RBP16.14■□□□□ 0.17
VCL-205ENST00000478896 PEX10O60683 326 aa16.13■□□□□ 0.17
VCL-205ENST00000478896 GH2P01242 217 aa16.13■□□□□ 0.17
VCL-205ENST00000478896 TRIM32Q13049 653 aa16.13■□□□□ 0.17
VCL-205ENST00000478896 CEP85Q6P2H3 762 aa16.13■□□□□ 0.17
VCL-205ENST00000478896 USP17L2Q6R6M4 530 aa16.13■□□□□ 0.17
VCL-205ENST00000478896 TRIB2Q92519 343 aa16.13■□□□□ 0.17
VCL-205ENST00000478896 MAPK4P31152 587 aa16.12■□□□□ 0.17
VCL-205ENST00000478896 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
VCL-205ENST00000478896 ERVK-24P63145 666 aa16.12■□□□□ 0.17
VCL-205ENST00000478896 RAB3GAP1Q15042 981 aa16.12■□□□□ 0.17
VCL-205ENST00000478896 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
VCL-205ENST00000478896 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
VCL-205ENST00000478896 SERPINB13Q9UIV8 391 aa16.12■□□□□ 0.17
VCL-205ENST00000478896 TRIOBPQ9H2D6 2365 aa16.11■□□□□ 0.17
VCL-205ENST00000478896 PRKAR2AP13861 404 aaKnown RBP16.11■□□□□ 0.17
VCL-205ENST00000478896 ZKSCAN1P17029 563 aaPredicted RBP16.11■□□□□ 0.17
VCL-205ENST00000478896 TTC6Q86TZ1 520 aa16.11■□□□□ 0.17
VCL-205ENST00000478896 C7orf61Q8IZ16 206 aa16.11■□□□□ 0.17
VCL-205ENST00000478896 EMILIN3Q9NT22 766 aa16.11■□□□□ 0.17
VCL-205ENST00000478896 RGS2P41220 211 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 USP14P54578 494 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 TTF1Q15361 905 aaPredicted RBP16.1■□□□□ 0.17
VCL-205ENST00000478896 CERKLQ49MI3 558 aaPredicted RBP16.1■□□□□ 0.17
VCL-205ENST00000478896 HSP90AB4PQ58FF6 505 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 TMED8Q6PL24 325 aaPredicted RBP16.1■□□□□ 0.17
VCL-205ENST00000478896 GPR142Q7Z601 462 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 TRMT44Q8IYL2 757 aaKnown RBP16.1■□□□□ 0.17
VCL-205ENST00000478896 PANK1Q8TE04 598 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 NBPF3Q9H094 633 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 BCL11AQ9H165 835 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 EHD4Q9H223 541 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 IL1RAPL2Q9NP60 686 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 CABP5Q9NP86 173 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 RBPJLQ9UBG7 517 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 CEP290O15078 2479 aa16.1■□□□□ 0.17
VCL-205ENST00000478896 POLR3DP05423 398 aaPredicted RBP16.09■□□□□ 0.17
VCL-205ENST00000478896 XRCC5P13010 732 aaKnown RBP16.09■□□□□ 0.17
VCL-205ENST00000478896 ABCB5Q2M3G0 1257 aa16.09■□□□□ 0.17
VCL-205ENST00000478896 Q3C1V9 767 aa16.09■□□□□ 0.17
VCL-205ENST00000478896 WDR78Q5VTH9 848 aa16.09■□□□□ 0.17
VCL-205ENST00000478896 TATDN1Q6P1N9 297 aa16.09■□□□□ 0.17
VCL-205ENST00000478896 PLEKHH3Q7Z736 793 aa16.09■□□□□ 0.17
VCL-205ENST00000478896 C12orf42Q96LP6 360 aa16.09■□□□□ 0.17
VCL-205ENST00000478896 APBA2Q99767 749 aa16.09■□□□□ 0.17
VCL-205ENST00000478896 PORCNQ9H237 461 aa16.09■□□□□ 0.17
VCL-205ENST00000478896 PRO3102Q9H379 93 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms