RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 GABPAQ06546 454 aa32.03■■■□□ 2.72
CCM2-211ENST00000478582 SLC4A8Q2Y0W8 1093 aa32.03■■■□□ 2.72
CCM2-211ENST00000478582 ZNF589Q86UQ0 364 aaPredicted RBP32.03■■■□□ 2.72
CCM2-211ENST00000478582 AMOTL1Q8IY63 956 aa32.03■■■□□ 2.72
CCM2-211ENST00000478582 ZNF296Q8WUU4 475 aaPredicted RBP32.03■■■□□ 2.72
CCM2-211ENST00000478582 NACAP1Q9BZK3 213 aa32.03■■■□□ 2.72
CCM2-211ENST00000478582 R3HDMLQ9H3Y0 253 aa32.03■■■□□ 2.72
CCM2-211ENST00000478582 FAM196BA6NMK8 535 aa32.02■■■□□ 2.72
CCM2-211ENST00000478582 FOXP2O15409 715 aa32.02■■■□□ 2.72
CCM2-211ENST00000478582 APPP05067 770 aa32.02■■■□□ 2.72
CCM2-211ENST00000478582 TRIM34Q9BYJ4 488 aa32.02■■■□□ 2.72
CCM2-211ENST00000478582 CYP2D6P10635 497 aa32.01■■■□□ 2.71
CCM2-211ENST00000478582 PPATQ06203 517 aa32.01■■■□□ 2.71
CCM2-211ENST00000478582 BRI3BPQ8WY22 251 aa32.01■■■□□ 2.71
CCM2-211ENST00000478582 CCL15-CCL14A0A0B4J2E2 113 aa32■■■□□ 2.71
CCM2-211ENST00000478582 PPIL2Q13356 520 aa32■■■□□ 2.71
CCM2-211ENST00000478582 ALX1Q15699 326 aa32■■■□□ 2.71
CCM2-211ENST00000478582 CCL15Q16663 113 aa32■■■□□ 2.71
CCM2-211ENST00000478582 VPS53Q5VIR6 699 aa32■■■□□ 2.71
CCM2-211ENST00000478582 TATDN1Q6P1N9 297 aa32■■■□□ 2.71
CCM2-211ENST00000478582 RUFY2Q8WXA3 655 aa32■■■□□ 2.71
CCM2-211ENST00000478582 RAD50Q92878 1312 aa32■■■□□ 2.71
CCM2-211ENST00000478582 IRF6O14896 467 aa31.99■■■□□ 2.71
CCM2-211ENST00000478582 TDO2P48775 406 aa31.99■■■□□ 2.71
CCM2-211ENST00000478582 SCYL3Q8IZE3 742 aa31.99■■■□□ 2.71
CCM2-211ENST00000478582 BAZ2AQ9UIF9 1905 aaKnown RBP31.98■■■□□ 2.71
CCM2-211ENST00000478582 FKTNO75072 461 aa31.98■■■□□ 2.71
CCM2-211ENST00000478582 HSPD1P10809 573 aaKnown RBP31.98■■■□□ 2.71
CCM2-211ENST00000478582 CAP2P40123 477 aa31.98■■■□□ 2.71
CCM2-211ENST00000478582 EVX2Q03828 476 aa31.98■■■□□ 2.71
CCM2-211ENST00000478582 CTU1Q7Z7A3 348 aaKnown RBP31.98■■■□□ 2.71
CCM2-211ENST00000478582 NAPBQ9H115 298 aa31.98■■■□□ 2.71
CCM2-211ENST00000478582 SWAP70Q9UH65 585 aa31.98■■■□□ 2.71
CCM2-211ENST00000478582 CYP2D7A0A087X1C5 515 aa31.97■■■□□ 2.71
CCM2-211ENST00000478582 CETPP11597 493 aa31.97■■■□□ 2.71
CCM2-211ENST00000478582 SNAPC2Q13487 334 aa31.97■■■□□ 2.71
CCM2-211ENST00000478582 RRP1BQ14684 758 aaKnown RBP31.97■■■□□ 2.71
CCM2-211ENST00000478582 SHMT1P34896 483 aa31.96■■■□□ 2.71
CCM2-211ENST00000478582 GINM1Q9NU53 330 aa31.96■■■□□ 2.71
CCM2-211ENST00000478582 ZMYM6O95789 1325 aa31.96■■■□□ 2.71
CCM2-211ENST00000478582 CRHR2Q13324 411 aa31.95■■■□□ 2.71
CCM2-211ENST00000478582 IL25Q9H293 177 aa31.95■■■□□ 2.71
CCM2-211ENST00000478582 ROBO3Q96MS0 1386 aa31.94■■■□□ 2.7
CCM2-211ENST00000478582 C16orf86Q6ZW13 317 aa31.94■■■□□ 2.7
CCM2-211ENST00000478582 DYNLL2Q96FJ2 89 aa31.94■■■□□ 2.7
CCM2-211ENST00000478582 PICK1Q9NRD5 415 aa31.94■■■□□ 2.7
CCM2-211ENST00000478582 MINDY4BA8MYZ0 360 aa31.93■■■□□ 2.7
CCM2-211ENST00000478582 SMIM22K7EJ46 135 aa31.93■■■□□ 2.7
CCM2-211ENST00000478582 SGSM2O43147 1006 aa31.93■■■□□ 2.7
CCM2-211ENST00000478582 FGAP02671 866 aa31.93■■■□□ 2.7
CCM2-211ENST00000478582 PTPRAP18433 802 aa31.93■■■□□ 2.7
CCM2-211ENST00000478582 FAM43AQ8N2R8 423 aa31.93■■■□□ 2.7
CCM2-211ENST00000478582 DSCC1Q9BVC3 393 aa31.93■■■□□ 2.7
CCM2-211ENST00000478582 KCNH4Q9UQ05 1017 aa31.93■■■□□ 2.7
CCM2-211ENST00000478582 CDK8P49336 464 aa31.92■■■□□ 2.7
CCM2-211ENST00000478582 TAF1CQ15572 869 aaPredicted RBP31.91■■■□□ 2.7
CCM2-211ENST00000478582 CERKLQ49MI3 558 aaPredicted RBP31.91■■■□□ 2.7
CCM2-211ENST00000478582 ZCCHC17Q9NP64 241 aaKnown RBP31.91■■■□□ 2.7
CCM2-211ENST00000478582 DOCK1Q14185 1865 aa31.91■■■□□ 2.7
CCM2-211ENST00000478582 ASNSP08243 561 aa31.9■■■□□ 2.7
CCM2-211ENST00000478582 PPARAQ07869 468 aa31.9■■■□□ 2.7
CCM2-211ENST00000478582 PKN2Q16513 984 aaKnown RBP31.9■■■□□ 2.7
CCM2-211ENST00000478582 SLC44A5Q8NCS7 719 aa31.9■■■□□ 2.7
CCM2-211ENST00000478582 ZFYVE28Q9HCC9 887 aa31.9■■■□□ 2.7
CCM2-211ENST00000478582 ANAPC4Q9UJX5 808 aa31.9■■■□□ 2.7
CCM2-211ENST00000478582 BTBD19C9JJ37 291 aa31.89■■■□□ 2.7
CCM2-211ENST00000478582 JAG1P78504 1218 aa31.89■■■□□ 2.7
CCM2-211ENST00000478582 TBC1D2Q9BYX2 928 aa31.89■■■□□ 2.7
CCM2-211ENST00000478582 CCDC85CA6NKD9 419 aa31.88■■■□□ 2.69
CCM2-211ENST00000478582 CXCL11O14625 94 aa31.88■■■□□ 2.69
CCM2-211ENST00000478582 CDC45O75419 566 aa31.88■■■□□ 2.69
CCM2-211ENST00000478582 GDF11O95390 407 aa31.88■■■□□ 2.69
CCM2-211ENST00000478582 ZHX2Q9Y6X8 837 aa31.88■■■□□ 2.69
CCM2-211ENST00000478582 CCDC17Q96LX7 622 aa31.87■■■□□ 2.69
CCM2-211ENST00000478582 ESYT1Q9BSJ8 1104 aa31.87■■■□□ 2.69
CCM2-211ENST00000478582 ZBTB21Q9ULJ3 1066 aa31.87■■■□□ 2.69
CCM2-211ENST00000478582 USP17L5A8MUK1 530 aa31.86■■■□□ 2.69
CCM2-211ENST00000478582 SLC3A2P08195 630 aaKnown RBP31.86■■■□□ 2.69
CCM2-211ENST00000478582 ABCB5Q2M3G0 1257 aa31.86■■■□□ 2.69
CCM2-211ENST00000478582 ZNF287Q9HBT7 754 aa31.86■■■□□ 2.69
CCM2-211ENST00000478582 AFG3L2Q9Y4W6 797 aa31.86■■■□□ 2.69
CCM2-211ENST00000478582 GH2P01242 217 aa31.85■■■□□ 2.69
CCM2-211ENST00000478582 SP3Q02447 781 aa31.85■■■□□ 2.69
CCM2-211ENST00000478582 CASC1Q6TDU7 716 aa31.85■■■□□ 2.69
CCM2-211ENST00000478582 ANKRD23Q86SG2 305 aa31.85■■■□□ 2.69
CCM2-211ENST00000478582 CABP5Q9NP86 173 aa31.85■■■□□ 2.69
CCM2-211ENST00000478582 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.85■■■□□ 2.69
CCM2-211ENST00000478582 ATAD5Q96QE3 1844 aa31.84■■■□□ 2.69
CCM2-211ENST00000478582 MOGSQ13724 837 aa31.84■■■□□ 2.69
CCM2-211ENST00000478582 SHROOM1Q2M3G4 852 aaPredicted RBP31.84■■■□□ 2.69
CCM2-211ENST00000478582 ERO1AQ96HE7 468 aa31.84■■■□□ 2.69
CCM2-211ENST00000478582 CTNNA3Q9UI47 895 aa31.84■■■□□ 2.69
CCM2-211ENST00000478582 PDE4BQ07343 736 aa31.83■■■□□ 2.69
CCM2-211ENST00000478582 WDR18Q9BV38 432 aa31.83■■■□□ 2.69
CCM2-211ENST00000478582 MKNK2Q9HBH9 465 aa31.83■■■□□ 2.69
CCM2-211ENST00000478582 AS3MTQ9HBK9 375 aa31.83■■■□□ 2.69
CCM2-211ENST00000478582 FGRP09769 529 aa31.82■■■□□ 2.68
CCM2-211ENST00000478582 RASA1P20936 1047 aa31.82■■■□□ 2.68
CCM2-211ENST00000478582 TLR2O60603 784 aa31.81■■■□□ 2.68
CCM2-211ENST00000478582 AKR1B1P15121 316 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms