RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LRRC10BA6NIK2 292 aa7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 H3BS24 57 aa7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 CBX7O95931 251 aa7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 GNA15P30679 374 aa7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 GRK4P32298 578 aa7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 SEPT6Q14141 434 aa7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 SLBPQ14493 270 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 FLAD1Q8NFF5 587 aa7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 HSPA12BQ96MM6 686 aa7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 SLC38A3Q99624 504 aa7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 ATP13A1Q9HD20 1204 aa7.02□□□□□ -1.29
CDC42BPA-212ENST00000478573 MFAP1P55081 439 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-212ENST00000478573 MLANAQ16655 118 aa7.01□□□□□ -1.29
CDC42BPA-212ENST00000478573 LETMD1Q6P1Q0 360 aa7.01□□□□□ -1.29
CDC42BPA-212ENST00000478573 HID1Q8IV36 788 aa7.01□□□□□ -1.29
CDC42BPA-212ENST00000478573 MFSD2AQ8NA29 543 aa7.01□□□□□ -1.29
CDC42BPA-212ENST00000478573 FRMD6Q96NE9 622 aa7.01□□□□□ -1.29
CDC42BPA-212ENST00000478573 PCDHB5Q9Y5E4 795 aa7.01□□□□□ -1.29
CDC42BPA-212ENST00000478573 SNCAIPQ9Y6H5 919 aa7.01□□□□□ -1.29
CDC42BPA-212ENST00000478573 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
CDC42BPA-212ENST00000478573 PRAMEF13Q5VWM6 474 aa7□□□□□ -1.29
CDC42BPA-212ENST00000478573 RIN3Q8TB24 985 aa7□□□□□ -1.29
CDC42BPA-212ENST00000478573 CTNND2Q9UQB3 1225 aa7□□□□□ -1.29
CDC42BPA-212ENST00000478573 RGS22Q8NE09 1264 aa6.99□□□□□ -1.29
CDC42BPA-212ENST00000478573 DPH2Q9BQC3 489 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-212ENST00000478573 SEMA3GQ9NS98 782 aa6.99□□□□□ -1.29
CDC42BPA-212ENST00000478573 RNF19AQ9NV58 838 aa6.99□□□□□ -1.29
CDC42BPA-212ENST00000478573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.99□□□□□ -1.29
CDC42BPA-212ENST00000478573 PRPF40AO75400 957 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 ZNF865P0CJ78 1059 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 AFMP43652 599 aa6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 FYB2Q5VWT5 728 aa6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 ZNF746Q6NUN9 644 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 MPZL3Q6UWV2 235 aa6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 CDH24Q86UP0 819 aa6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 LIN37Q96GY3 246 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 DUSP9Q99956 384 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 LMCD1Q9NZU5 365 aa6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 CAPN6Q9Y6Q1 641 aa6.98□□□□□ -1.29
CDC42BPA-212ENST00000478573 RBAK-RBAKDNI3L0D1 243 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 CST3P01034 146 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 PGRP06401 933 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 CYP7A1P22680 504 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 CAP2P40123 477 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 LIG3P49916 1009 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 CCDC27Q2M243 656 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 NPAS4Q8IUM7 802 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 MIR1-1HGQ9H1L0 117 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 FAM53CQ9NYF3 392 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 ZSWIM5Q9P217 1185 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 AK5Q9Y6K8 562 aa6.97□□□□□ -1.29
CDC42BPA-212ENST00000478573 ZNF503-AS2A6NEH8 195 aa6.96□□□□□ -1.3
CDC42BPA-212ENST00000478573 DBX1A6NMT0 343 aa6.96□□□□□ -1.3
CDC42BPA-212ENST00000478573 RPS26P62854 115 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-212ENST00000478573 EAPPQ56P03 285 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-212ENST00000478573 MEI1Q5TIA1 1274 aa6.96□□□□□ -1.3
CDC42BPA-212ENST00000478573 C22orf34Q6ZV56 151 aa6.96□□□□□ -1.3
CDC42BPA-212ENST00000478573 UBE2FQ969M7 185 aa6.96□□□□□ -1.3
CDC42BPA-212ENST00000478573 KIRREL1Q96J84 757 aa6.96□□□□□ -1.3
CDC42BPA-212ENST00000478573 FAM84AQ96KN4 292 aa6.96□□□□□ -1.3
CDC42BPA-212ENST00000478573 ST14Q9Y5Y6 855 aa6.96□□□□□ -1.3
CDC42BPA-212ENST00000478573 ANKRD33BA6NCL7 494 aa6.95□□□□□ -1.3
CDC42BPA-212ENST00000478573 AGMOQ6ZNB7 445 aa6.95□□□□□ -1.3
CDC42BPA-212ENST00000478573 JARID2Q92833 1246 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-212ENST00000478573 GFRA2O00451 464 aa6.94□□□□□ -1.3
CDC42BPA-212ENST00000478573 GLI1P08151 1106 aa6.94□□□□□ -1.3
CDC42BPA-212ENST00000478573 TFE3P19532 575 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-212ENST00000478573 MESP2Q0VG99 397 aa6.94□□□□□ -1.3
CDC42BPA-212ENST00000478573 TMEM67Q5HYA8 995 aa6.94□□□□□ -1.3
CDC42BPA-212ENST00000478573 TMEM87BQ96K49 555 aa6.94□□□□□ -1.3
CDC42BPA-212ENST00000478573 SLAMF8Q9P0V8 285 aa6.94□□□□□ -1.3
CDC42BPA-212ENST00000478573 TJP2Q9UDY2 1190 aa6.94□□□□□ -1.3
CDC42BPA-212ENST00000478573 TLR6Q9Y2C9 796 aa6.94□□□□□ -1.3
CDC42BPA-212ENST00000478573 KIR3DL1P43629 444 aa6.93□□□□□ -1.3
CDC42BPA-212ENST00000478573 PDE4BQ07343 736 aa6.93□□□□□ -1.3
CDC42BPA-212ENST00000478573 TNK2Q07912 1038 aa6.93□□□□□ -1.3
CDC42BPA-212ENST00000478573 PRR23BQ6ZRT6 265 aa6.93□□□□□ -1.3
CDC42BPA-212ENST00000478573 ALPK1Q96QP1 1244 aa6.93□□□□□ -1.3
CDC42BPA-212ENST00000478573 C19orf73Q9NVV2 129 aa6.93□□□□□ -1.3
CDC42BPA-212ENST00000478573 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-212ENST00000478573 F6X3S4 739 aa6.92□□□□□ -1.3
CDC42BPA-212ENST00000478573 GDNFP39905 211 aa6.92□□□□□ -1.3
CDC42BPA-212ENST00000478573 PSMD2Q13200 908 aa6.92□□□□□ -1.3
CDC42BPA-212ENST00000478573 TSNAXIP1Q2TAA8 658 aa6.92□□□□□ -1.3
CDC42BPA-212ENST00000478573 THAP5Q7Z6K1 395 aa6.92□□□□□ -1.3
CDC42BPA-212ENST00000478573 MRPL41Q8IXM3 137 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-212ENST00000478573 COX4I2Q96KJ9 171 aa6.92□□□□□ -1.3
CDC42BPA-212ENST00000478573 PARP2Q9UGN5 583 aa6.92□□□□□ -1.3
CDC42BPA-212ENST00000478573 ETV3P41162 512 aa6.91□□□□□ -1.3
CDC42BPA-212ENST00000478573 RAP1GAPP47736 663 aa6.91□□□□□ -1.3
CDC42BPA-212ENST00000478573 RPL6Q02878 288 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-212ENST00000478573 DIEXFQ68CQ4 756 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-212ENST00000478573 SLC6A19Q695T7 634 aa6.91□□□□□ -1.3
CDC42BPA-212ENST00000478573 SYDE1Q6ZW31 735 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-212ENST00000478573 CCDC120Q96HB5 630 aa6.91□□□□□ -1.3
CDC42BPA-212ENST00000478573 DIRC2Q96SL1 478 aa6.91□□□□□ -1.3
CDC42BPA-212ENST00000478573 TACC3Q9Y6A5 838 aa6.91□□□□□ -1.3
CDC42BPA-212ENST00000478573 WASH4PA8MWX3 477 aa6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 RAC2P15153 192 aa6.9□□□□□ -1.3
CDC42BPA-212ENST00000478573 HK2P52789 917 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms