RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 ZAP70P43403 619 aa15.87■□□□□ 0.13
ABCF3-212ENST00000478288 CRACR2BQ8N4Y2 399 aaPredicted RBP15.87■□□□□ 0.13
ABCF3-212ENST00000478288 GTF3C2Q8WUA4 911 aaPredicted RBP15.87■□□□□ 0.13
ABCF3-212ENST00000478288 TRIM34Q9BYJ4 488 aa15.87■□□□□ 0.13
ABCF3-212ENST00000478288 C1orf115Q9H7X2 142 aa15.87■□□□□ 0.13
ABCF3-212ENST00000478288 PIH1D3Q9NQM4 214 aaKnown RBP15.87■□□□□ 0.13
ABCF3-212ENST00000478288 TMOD4Q9NZQ9 345 aa15.87■□□□□ 0.13
ABCF3-212ENST00000478288 GJD2Q9UKL4 321 aa15.87■□□□□ 0.13
ABCF3-212ENST00000478288 ZBTB21Q9ULJ3 1066 aa15.87■□□□□ 0.13
ABCF3-212ENST00000478288 ALPK3Q96L96 1907 aa15.87■□□□□ 0.13
ABCF3-212ENST00000478288 DDX60LQ5H9U9 1706 aaKnown RBP15.87■□□□□ 0.13
ABCF3-212ENST00000478288 USP17L10C9JJH3 530 aa15.86■□□□□ 0.13
ABCF3-212ENST00000478288 RLBP1P12271 317 aa15.86■□□□□ 0.13
ABCF3-212ENST00000478288 IRX3P78415 501 aaPredicted RBP15.86■□□□□ 0.13
ABCF3-212ENST00000478288 HNRNPUQ00839 825 aaKnown RBP eCLIP15.86■□□□□ 0.13
ABCF3-212ENST00000478288 CEP85Q6P2H3 762 aa15.86■□□□□ 0.13
ABCF3-212ENST00000478288 ERC1Q8IUD2 1116 aa15.86■□□□□ 0.13
ABCF3-212ENST00000478288 ANKLE1Q8NAG6 615 aa15.86■□□□□ 0.13
ABCF3-212ENST00000478288 EAF2Q96CJ1 260 aaPredicted RBP15.86■□□□□ 0.13
ABCF3-212ENST00000478288 DEFB118Q96PH6 123 aa15.86■□□□□ 0.13
ABCF3-212ENST00000478288 EHD4Q9H223 541 aa15.86■□□□□ 0.13
ABCF3-212ENST00000478288 PRO3102Q9H379 93 aa15.86■□□□□ 0.13
ABCF3-212ENST00000478288 PALD1Q9ULE6 856 aa15.86■□□□□ 0.13
ABCF3-212ENST00000478288 DNAH12Q6ZR08 3092 aa15.85■□□□□ 0.13
ABCF3-212ENST00000478288 CHRDL2Q6WN34 429 aa15.85■□□□□ 0.13
ABCF3-212ENST00000478288 SOCS4Q8WXH5 440 aa15.85■□□□□ 0.13
ABCF3-212ENST00000478288 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.85■□□□□ 0.13
ABCF3-212ENST00000478288 TLR7Q9NYK1 1049 aaKnown RBP15.85■□□□□ 0.13
ABCF3-212ENST00000478288 TFRCP02786 760 aaKnown RBP15.84■□□□□ 0.13
ABCF3-212ENST00000478288 XRCC5P13010 732 aaKnown RBP15.84■□□□□ 0.13
ABCF3-212ENST00000478288 CYP7A1P22680 504 aa15.84■□□□□ 0.13
ABCF3-212ENST00000478288 HERVK_113P62684 666 aa15.84■□□□□ 0.13
ABCF3-212ENST00000478288 JAG1P78504 1218 aa15.84■□□□□ 0.13
ABCF3-212ENST00000478288 TATDN1Q6P1N9 297 aa15.84■□□□□ 0.13
ABCF3-212ENST00000478288 GPRC5AQ8NFJ5 357 aa15.84■□□□□ 0.13
ABCF3-212ENST00000478288 C12orf42Q96LP6 360 aa15.84■□□□□ 0.13
ABCF3-212ENST00000478288 RPTORQ8N122 1335 aa15.84■□□□□ 0.13
ABCF3-212ENST00000478288 NAV1Q8NEY1 1877 aa15.83■□□□□ 0.12
ABCF3-212ENST00000478288 A0A1W2PPC1 479 aa15.83■□□□□ 0.12
ABCF3-212ENST00000478288 IDH1O75874 414 aaKnown RBP15.83■□□□□ 0.12
ABCF3-212ENST00000478288 GDF11O95390 407 aa15.83■□□□□ 0.12
ABCF3-212ENST00000478288 MAP3K12Q12852 859 aa15.83■□□□□ 0.12
ABCF3-212ENST00000478288 HSP90AB4PQ58FF6 505 aa15.83■□□□□ 0.12
ABCF3-212ENST00000478288 TRMT44Q8IYL2 757 aaKnown RBP15.83■□□□□ 0.12
ABCF3-212ENST00000478288 CCDC8Q9H0W5 538 aaPredicted RBP15.83■□□□□ 0.12
ABCF3-212ENST00000478288 RBM27Q9P2N5 1060 aaKnown RBP15.83■□□□□ 0.12
ABCF3-212ENST00000478288 TAOK2Q9UL54 1235 aa15.83■□□□□ 0.12
ABCF3-212ENST00000478288 ZBED9Q6R2W3 1325 aa15.83■□□□□ 0.12
ABCF3-212ENST00000478288 MAPK4P31152 587 aa15.82■□□□□ 0.12
ABCF3-212ENST00000478288 DYNLL1P63167 89 aaKnown RBP15.82■□□□□ 0.12
ABCF3-212ENST00000478288 MAP3K21Q5TCX8 1036 aa15.82■□□□□ 0.12
ABCF3-212ENST00000478288 USP17L2Q6R6M4 530 aa15.82■□□□□ 0.12
ABCF3-212ENST00000478288 NECAB2Q7Z6G3 386 aa15.82■□□□□ 0.12
ABCF3-212ENST00000478288 MAGEB6Q8N7X4 407 aa15.82■□□□□ 0.12
ABCF3-212ENST00000478288 P2RX7Q99572 595 aaKnown RBP15.82■□□□□ 0.12
ABCF3-212ENST00000478288 HMX1Q9NP08 348 aaPredicted RBP15.82■□□□□ 0.12
ABCF3-212ENST00000478288 SERPINB13Q9UIV8 391 aa15.82■□□□□ 0.12
ABCF3-212ENST00000478288 COL6A3P12111 3177 aa15.82■□□□□ 0.12
ABCF3-212ENST00000478288 EVI5O60447 810 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 USP5P45974 858 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 ERVK-9P63128 1117 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 ERVK-24P63145 666 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 SHROOM1Q2M3G4 852 aaPredicted RBP15.81■□□□□ 0.12
ABCF3-212ENST00000478288 TTC6Q86TZ1 520 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 MIGA1Q8NAN2 632 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 TRIB2Q92519 343 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 NUDT12Q9BQG2 462 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 TXNRD2Q9NNW7 524 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 EMILIN3Q9NT22 766 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 RBPJLQ9UBG7 517 aa15.81■□□□□ 0.12
ABCF3-212ENST00000478288 SAP30BPQ9UHR5 308 aaKnown RBP15.81■□□□□ 0.12
ABCF3-212ENST00000478288 GH2P01242 217 aa15.8■□□□□ 0.12
ABCF3-212ENST00000478288 MS4A1P11836 297 aa15.8■□□□□ 0.12
ABCF3-212ENST00000478288 USP14P54578 494 aa15.8■□□□□ 0.12
ABCF3-212ENST00000478288 PDE3AQ14432 1141 aa15.8■□□□□ 0.12
ABCF3-212ENST00000478288 TTF1Q15361 905 aaPredicted RBP15.8■□□□□ 0.12
ABCF3-212ENST00000478288 AACSQ86V21 672 aa15.8■□□□□ 0.12
ABCF3-212ENST00000478288 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.8■□□□□ 0.12
ABCF3-212ENST00000478288 USP6NLQ92738 828 aa15.8■□□□□ 0.12
ABCF3-212ENST00000478288 PAWRQ96IZ0 340 aaKnown RBP15.8■□□□□ 0.12
ABCF3-212ENST00000478288 OGDHLQ9ULD0 1010 aa15.8■□□□□ 0.12
ABCF3-212ENST00000478288 EXOC6BQ9Y2D4 811 aa15.8■□□□□ 0.12
ABCF3-212ENST00000478288 A0A0C4DFX4 3053 aa15.8■□□□□ 0.12
ABCF3-212ENST00000478288 MYH8P13535 1937 aa15.8■□□□□ 0.12
ABCF3-212ENST00000478288 LBX2Q6XYB7 198 aa15.79■□□□□ 0.12
ABCF3-212ENST00000478288 RIOK1Q9BRS2 568 aaKnown RBP15.79■□□□□ 0.12
ABCF3-212ENST00000478288 NBPF3Q9H094 633 aa15.79■□□□□ 0.12
ABCF3-212ENST00000478288 KIAA1683Q9H0B3 1180 aa15.79■□□□□ 0.12
ABCF3-212ENST00000478288 ANTXR1Q9H6X2 564 aa15.79■□□□□ 0.12
ABCF3-212ENST00000478288 RABGAP1Q9Y3P9 1069 aa15.79■□□□□ 0.12
ABCF3-212ENST00000478288 FRMPD3Q5JV73 1810 aa15.79■□□□□ 0.12
ABCF3-212ENST00000478288 LAMA2P24043 3122 aaKnown RBP15.79■□□□□ 0.12
ABCF3-212ENST00000478288 USP17L15C9J2P7 530 aa15.78■□□□□ 0.12
ABCF3-212ENST00000478288 USP17L13C9JLJ4 530 aa15.78■□□□□ 0.12
ABCF3-212ENST00000478288 USP17L11C9JVI0 530 aa15.78■□□□□ 0.12
ABCF3-212ENST00000478288 USP17L18D6R9N7 530 aa15.78■□□□□ 0.12
ABCF3-212ENST00000478288 USP17L22D6RA61 530 aa15.78■□□□□ 0.12
ABCF3-212ENST00000478288 USP17L17D6RBQ6 530 aa15.78■□□□□ 0.12
ABCF3-212ENST00000478288 USP17L19D6RCP7 530 aa15.78■□□□□ 0.12
ABCF3-212ENST00000478288 USP17L20D6RJB6 530 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms